Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3388 and Dsui_3389 are separated by 135 nucleotides Dsui_3389 and Dsui_3390 are separated by 19 nucleotides Dsui_3390 and Dsui_3391 are separated by 24 nucleotides
Dsui_3388: Dsui_3388 - hypothetical protein, at 3,632,260 to 3,633,627
_3388
Dsui_3389: Dsui_3389 - enoyl-CoA hydratase/carnithine racemase, at 3,633,763 to 3,634,542
_3389
Dsui_3390: Dsui_3390 - hypothetical protein, at 3,634,562 to 3,635,101
_3390
Dsui_3391: Dsui_3391 - putative glutamine amidotransferase, at 3,635,126 to 3,635,905
_3391
Position (kb)
3633
3634
3635 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3632.817 kb on + strand, within Dsui_3388 at 3632.845 kb on + strand, within Dsui_3388 at 3632.853 kb on - strand, within Dsui_3388 at 3632.927 kb on + strand, within Dsui_3388 at 3632.937 kb on + strand, within Dsui_3388 at 3633.010 kb on - strand, within Dsui_3388 at 3633.043 kb on - strand, within Dsui_3388 at 3633.049 kb on + strand, within Dsui_3388 at 3633.054 kb on + strand at 3633.057 kb on - strand, within Dsui_3388 at 3633.157 kb on - strand, within Dsui_3388 at 3633.192 kb on + strand, within Dsui_3388 at 3633.264 kb on + strand, within Dsui_3388 at 3633.271 kb on + strand, within Dsui_3388 at 3633.369 kb on + strand at 3633.383 kb on - strand, within Dsui_3388 at 3633.407 kb on + strand, within Dsui_3388 at 3633.415 kb on - strand, within Dsui_3388 at 3633.415 kb on - strand, within Dsui_3388 at 3633.453 kb on + strand, within Dsui_3388 at 3633.466 kb on + strand, within Dsui_3388 at 3633.471 kb on + strand at 3633.508 kb on + strand at 3633.539 kb on - strand at 3633.632 kb on - strand at 3633.740 kb on - strand at 3633.956 kb on + strand, within Dsui_3389 at 3634.002 kb on - strand, within Dsui_3389 at 3634.063 kb on - strand, within Dsui_3389 at 3634.073 kb on - strand at 3634.120 kb on + strand, within Dsui_3389 at 3634.181 kb on + strand, within Dsui_3389 at 3634.203 kb on - strand, within Dsui_3389 at 3634.346 kb on - strand, within Dsui_3389 at 3634.453 kb on - strand, within Dsui_3389 at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.529 kb on + strand at 3634.529 kb on + strand at 3634.542 kb on + strand at 3634.644 kb on - strand, within Dsui_3390 at 3634.670 kb on + strand, within Dsui_3390 at 3634.688 kb on - strand, within Dsui_3390 at 3634.696 kb on + strand, within Dsui_3390 at 3634.697 kb on - strand, within Dsui_3390 at 3634.742 kb on - strand, within Dsui_3390 at 3634.749 kb on + strand at 3634.757 kb on - strand, within Dsui_3390 at 3634.761 kb on + strand, within Dsui_3390 at 3634.761 kb on + strand, within Dsui_3390 at 3634.761 kb on + strand at 3634.769 kb on - strand, within Dsui_3390 at 3634.795 kb on - strand, within Dsui_3390 at 3634.805 kb on - strand, within Dsui_3390 at 3634.828 kb on + strand, within Dsui_3390 at 3634.828 kb on + strand, within Dsui_3390 at 3634.836 kb on - strand, within Dsui_3390 at 3634.876 kb on - strand, within Dsui_3390 at 3634.886 kb on - strand, within Dsui_3390 at 3634.923 kb on + strand at 3634.926 kb on - strand, within Dsui_3390 at 3634.931 kb on - strand, within Dsui_3390 at 3634.941 kb on - strand, within Dsui_3390 at 3635.000 kb on + strand at 3635.040 kb on + strand, within Dsui_3390 at 3635.041 kb on - strand, within Dsui_3390 at 3635.048 kb on - strand at 3635.048 kb on - strand at 3635.081 kb on - strand at 3635.110 kb on - strand at 3635.110 kb on - strand at 3635.110 kb on - strand at 3635.148 kb on - strand at 3635.178 kb on + strand at 3635.186 kb on - strand at 3635.193 kb on + strand at 3635.205 kb on - strand, within Dsui_3391 at 3635.265 kb on + strand, within Dsui_3391 at 3635.273 kb on - strand, within Dsui_3391 at 3635.378 kb on - strand, within Dsui_3391 at 3635.412 kb on + strand, within Dsui_3391 at 3635.420 kb on - strand, within Dsui_3391 at 3635.434 kb on - strand, within Dsui_3391 at 3635.503 kb on - strand, within Dsui_3391
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,632,817 + Dsui_3388 0.41 -0.5 3,632,845 + Dsui_3388 0.43 -1.5 3,632,853 - Dsui_3388 0.43 -1.5 3,632,927 + Dsui_3388 0.49 +0.5 3,632,937 + Dsui_3388 0.49 -1.5 3,633,010 - Dsui_3388 0.55 +2.1 3,633,043 - Dsui_3388 0.57 -1.1 3,633,049 + Dsui_3388 0.58 -1.1 3,633,054 + +0.5 3,633,057 - Dsui_3388 0.58 -1.1 3,633,157 - Dsui_3388 0.66 +0.5 3,633,192 + Dsui_3388 0.68 +0.0 3,633,264 + Dsui_3388 0.73 -0.5 3,633,271 + Dsui_3388 0.74 +0.5 3,633,369 + +0.5 3,633,383 - Dsui_3388 0.82 -2.0 3,633,407 + Dsui_3388 0.84 +0.5 3,633,415 - Dsui_3388 0.84 -1.8 3,633,415 - Dsui_3388 0.84 +0.5 3,633,453 + Dsui_3388 0.87 -1.1 3,633,466 + Dsui_3388 0.88 -2.3 3,633,471 + -0.5 3,633,508 + -0.5 3,633,539 - +2.1 3,633,632 - +0.5 3,633,740 - -1.1 3,633,956 + Dsui_3389 0.25 -1.5 3,634,002 - Dsui_3389 0.31 -1.1 3,634,063 - Dsui_3389 0.38 -1.1 3,634,073 - +0.5 3,634,120 + Dsui_3389 0.46 +0.5 3,634,181 + Dsui_3389 0.54 -1.8 3,634,203 - Dsui_3389 0.56 -1.1 3,634,346 - Dsui_3389 0.75 -0.5 3,634,453 - Dsui_3389 0.88 -0.5 3,634,465 + +0.5 3,634,465 + +0.5 3,634,465 + -0.5 3,634,465 + +0.5 3,634,465 + -0.5 3,634,465 + -0.5 3,634,473 - +0.5 3,634,473 - -0.2 3,634,473 - -0.5 3,634,473 - -1.5 3,634,473 - -0.5 3,634,473 - -0.5 3,634,473 - -0.5 3,634,473 - -1.5 3,634,473 - -0.5 3,634,529 + +0.5 3,634,529 + -1.1 3,634,542 + -0.5 3,634,644 - Dsui_3390 0.15 -1.4 3,634,670 + Dsui_3390 0.20 +0.5 3,634,688 - Dsui_3390 0.23 -2.1 3,634,696 + Dsui_3390 0.25 +0.5 3,634,697 - Dsui_3390 0.25 -1.4 3,634,742 - Dsui_3390 0.33 -0.7 3,634,749 + +0.5 3,634,757 - Dsui_3390 0.36 +1.0 3,634,761 + Dsui_3390 0.37 +0.5 3,634,761 + Dsui_3390 0.37 +0.5 3,634,761 + +0.5 3,634,769 - Dsui_3390 0.38 -1.4 3,634,795 - Dsui_3390 0.43 -1.1 3,634,805 - Dsui_3390 0.45 -0.9 3,634,828 + Dsui_3390 0.49 +0.5 3,634,828 + Dsui_3390 0.49 -1.5 3,634,836 - Dsui_3390 0.51 +0.5 3,634,876 - Dsui_3390 0.58 +0.2 3,634,886 - Dsui_3390 0.60 -0.5 3,634,923 + -1.1 3,634,926 - Dsui_3390 0.67 -2.1 3,634,931 - Dsui_3390 0.68 +0.1 3,634,941 - Dsui_3390 0.70 +0.4 3,635,000 + +0.5 3,635,040 + Dsui_3390 0.89 -1.1 3,635,041 - Dsui_3390 0.89 -0.5 3,635,048 - -0.1 3,635,048 - +0.3 3,635,081 - -0.4 3,635,110 - -0.1 3,635,110 - -0.2 3,635,110 - -0.3 3,635,148 - -1.2 3,635,178 + +0.5 3,635,186 - -0.8 3,635,193 + +0.5 3,635,205 - Dsui_3391 0.10 -0.1 3,635,265 + Dsui_3391 0.18 +0.5 3,635,273 - Dsui_3391 0.19 +0.2 3,635,378 - Dsui_3391 0.32 +3.3 3,635,412 + Dsui_3391 0.37 -0.5 3,635,420 - Dsui_3391 0.38 +1.1 3,635,434 - Dsui_3391 0.39 -0.8 3,635,503 - Dsui_3391 0.48 -0.1
Or see this region's nucleotide sequence