Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2635 and Dsui_2636 are separated by 11 nucleotides Dsui_2636 and Dsui_2637 overlap by 4 nucleotides
Dsui_2635: Dsui_2635 - heavy metal efflux pump, cobalt-zinc-cadmium, at 2,785,081 to 2,788,215
_2635
Dsui_2636: Dsui_2636 - RND family efflux transporter, MFP subunit, at 2,788,227 to 2,789,816
_2636
Dsui_2637: Dsui_2637 - outer membrane protein, at 2,789,813 to 2,791,084
_2637
Position (kb)
2788
2789
2790 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2787.247 kb on + strand, within Dsui_2635 at 2787.247 kb on + strand, within Dsui_2635 at 2787.247 kb on + strand, within Dsui_2635 at 2787.247 kb on + strand, within Dsui_2635 at 2787.247 kb on + strand, within Dsui_2635 at 2787.255 kb on - strand, within Dsui_2635 at 2787.255 kb on - strand, within Dsui_2635 at 2787.255 kb on - strand, within Dsui_2635 at 2787.280 kb on - strand, within Dsui_2635 at 2787.397 kb on + strand, within Dsui_2635 at 2787.453 kb on + strand, within Dsui_2635 at 2787.565 kb on + strand, within Dsui_2635 at 2787.739 kb on + strand, within Dsui_2635 at 2787.767 kb on + strand, within Dsui_2635 at 2787.813 kb on - strand, within Dsui_2635 at 2787.845 kb on + strand, within Dsui_2635 at 2787.936 kb on + strand at 2787.967 kb on + strand at 2788.078 kb on - strand at 2788.250 kb on - strand at 2788.621 kb on + strand, within Dsui_2636 at 2788.707 kb on - strand, within Dsui_2636 at 2788.780 kb on + strand at 2788.936 kb on - strand, within Dsui_2636 at 2788.962 kb on + strand, within Dsui_2636 at 2788.963 kb on + strand, within Dsui_2636 at 2788.971 kb on - strand, within Dsui_2636 at 2788.971 kb on - strand, within Dsui_2636 at 2788.971 kb on - strand, within Dsui_2636 at 2788.971 kb on - strand, within Dsui_2636 at 2788.971 kb on - strand, within Dsui_2636 at 2788.983 kb on - strand, within Dsui_2636 at 2789.152 kb on + strand, within Dsui_2636 at 2789.160 kb on - strand, within Dsui_2636 at 2789.160 kb on - strand, within Dsui_2636 at 2789.314 kb on - strand, within Dsui_2636 at 2789.336 kb on + strand, within Dsui_2636 at 2789.494 kb on - strand, within Dsui_2636 at 2789.569 kb on + strand, within Dsui_2636 at 2789.571 kb on + strand, within Dsui_2636 at 2789.577 kb on - strand, within Dsui_2636 at 2789.579 kb on - strand, within Dsui_2636 at 2789.634 kb on - strand, within Dsui_2636 at 2789.639 kb on - strand, within Dsui_2636 at 2789.798 kb on + strand at 2789.801 kb on - strand at 2789.806 kb on + strand at 2789.806 kb on - strand at 2789.996 kb on - strand, within Dsui_2637 at 2789.996 kb on - strand, within Dsui_2637 at 2789.996 kb on - strand, within Dsui_2637 at 2790.119 kb on - strand, within Dsui_2637 at 2790.166 kb on - strand, within Dsui_2637 at 2790.199 kb on + strand, within Dsui_2637 at 2790.220 kb on + strand at 2790.225 kb on + strand, within Dsui_2637 at 2790.228 kb on - strand, within Dsui_2637 at 2790.228 kb on - strand, within Dsui_2637 at 2790.228 kb on - strand, within Dsui_2637 at 2790.327 kb on - strand, within Dsui_2637 at 2790.327 kb on - strand, within Dsui_2637 at 2790.327 kb on - strand, within Dsui_2637 at 2790.365 kb on - strand, within Dsui_2637 at 2790.365 kb on - strand, within Dsui_2637 at 2790.519 kb on - strand, within Dsui_2637 at 2790.647 kb on - strand, within Dsui_2637 at 2790.695 kb on - strand, within Dsui_2637 at 2790.697 kb on + strand, within Dsui_2637 at 2790.705 kb on - strand, within Dsui_2637
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,787,247 + Dsui_2635 0.69 +0.5 2,787,247 + Dsui_2635 0.69 -0.5 2,787,247 + Dsui_2635 0.69 -1.5 2,787,247 + Dsui_2635 0.69 -0.5 2,787,247 + Dsui_2635 0.69 +0.5 2,787,255 - Dsui_2635 0.69 +0.5 2,787,255 - Dsui_2635 0.69 +0.5 2,787,255 - Dsui_2635 0.69 -1.5 2,787,280 - Dsui_2635 0.70 -0.5 2,787,397 + Dsui_2635 0.74 -0.5 2,787,453 + Dsui_2635 0.76 -0.5 2,787,565 + Dsui_2635 0.79 +0.5 2,787,739 + Dsui_2635 0.85 +0.5 2,787,767 + Dsui_2635 0.86 +0.5 2,787,813 - Dsui_2635 0.87 -0.5 2,787,845 + Dsui_2635 0.88 +0.5 2,787,936 + +0.5 2,787,967 + +0.5 2,788,078 - -1.1 2,788,250 - +0.5 2,788,621 + Dsui_2636 0.25 +0.5 2,788,707 - Dsui_2636 0.30 -1.1 2,788,780 + +0.5 2,788,936 - Dsui_2636 0.45 +1.1 2,788,962 + Dsui_2636 0.46 +0.5 2,788,963 + Dsui_2636 0.46 +0.5 2,788,971 - Dsui_2636 0.47 -1.1 2,788,971 - Dsui_2636 0.47 -0.5 2,788,971 - Dsui_2636 0.47 -1.8 2,788,971 - Dsui_2636 0.47 -1.1 2,788,971 - Dsui_2636 0.47 -0.5 2,788,983 - Dsui_2636 0.48 -2.1 2,789,152 + Dsui_2636 0.58 -0.5 2,789,160 - Dsui_2636 0.59 -1.1 2,789,160 - Dsui_2636 0.59 +0.5 2,789,314 - Dsui_2636 0.68 -3.4 2,789,336 + Dsui_2636 0.70 +0.5 2,789,494 - Dsui_2636 0.80 -0.5 2,789,569 + Dsui_2636 0.84 +0.5 2,789,571 + Dsui_2636 0.85 +0.5 2,789,577 - Dsui_2636 0.85 -2.5 2,789,579 - Dsui_2636 0.85 +0.5 2,789,634 - Dsui_2636 0.88 -1.5 2,789,639 - Dsui_2636 0.89 +0.5 2,789,798 + +0.5 2,789,801 - -0.5 2,789,806 + -1.1 2,789,806 - -1.5 2,789,996 - Dsui_2637 0.14 +0.5 2,789,996 - Dsui_2637 0.14 +0.5 2,789,996 - Dsui_2637 0.14 -1.8 2,790,119 - Dsui_2637 0.24 -0.5 2,790,166 - Dsui_2637 0.28 -0.5 2,790,199 + Dsui_2637 0.30 -2.5 2,790,220 + +0.5 2,790,225 + Dsui_2637 0.32 -0.5 2,790,228 - Dsui_2637 0.33 -0.8 2,790,228 - Dsui_2637 0.33 -0.5 2,790,228 - Dsui_2637 0.33 -1.5 2,790,327 - Dsui_2637 0.40 -0.5 2,790,327 - Dsui_2637 0.40 -0.5 2,790,327 - Dsui_2637 0.40 -0.5 2,790,365 - Dsui_2637 0.43 +0.5 2,790,365 - Dsui_2637 0.43 -1.1 2,790,519 - Dsui_2637 0.56 -1.1 2,790,647 - Dsui_2637 0.66 +0.5 2,790,695 - Dsui_2637 0.69 -1.1 2,790,697 + Dsui_2637 0.69 -1.5 2,790,705 - Dsui_2637 0.70 -1.8
Or see this region's nucleotide sequence