Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2383 and Dsui_2384 overlap by 44 nucleotides Dsui_2384 and Dsui_2385 are separated by 49 nucleotides
Dsui_2383: Dsui_2383 - hypothetical protein, at 2,532,843 to 2,534,117
_2383
Dsui_2384: Dsui_2384 - putative esterase of the alpha-beta hydrolase superfamily, at 2,534,074 to 2,535,162
_2384
Dsui_2385: Dsui_2385 - transcription-repair coupling factor Mfd, at 2,535,212 to 2,538,808
_2385
Position (kb)
2534
2535
2536 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2533.261 kb on - strand at 2533.326 kb on + strand, within Dsui_2383 at 2533.331 kb on + strand, within Dsui_2383 at 2533.352 kb on + strand, within Dsui_2383 at 2533.353 kb on + strand, within Dsui_2383 at 2533.372 kb on + strand at 2533.488 kb on + strand, within Dsui_2383 at 2533.488 kb on + strand at 2533.706 kb on - strand at 2533.777 kb on - strand at 2533.804 kb on - strand at 2533.829 kb on + strand, within Dsui_2383 at 2533.861 kb on - strand at 2533.891 kb on + strand, within Dsui_2383 at 2533.906 kb on + strand, within Dsui_2383 at 2534.025 kb on + strand at 2534.087 kb on + strand at 2534.101 kb on - strand at 2534.182 kb on + strand at 2534.226 kb on + strand, within Dsui_2384 at 2534.234 kb on - strand, within Dsui_2384 at 2534.234 kb on - strand, within Dsui_2384 at 2534.386 kb on - strand, within Dsui_2384 at 2534.464 kb on + strand, within Dsui_2384 at 2534.472 kb on - strand, within Dsui_2384 at 2534.575 kb on - strand, within Dsui_2384 at 2534.580 kb on - strand, within Dsui_2384 at 2534.597 kb on + strand, within Dsui_2384 at 2534.610 kb on + strand at 2534.768 kb on - strand, within Dsui_2384 at 2534.802 kb on - strand, within Dsui_2384 at 2534.885 kb on - strand, within Dsui_2384 at 2534.933 kb on + strand, within Dsui_2384 at 2534.970 kb on + strand at 2534.978 kb on - strand, within Dsui_2384 at 2535.017 kb on + strand, within Dsui_2384 at 2535.092 kb on - strand at 2535.145 kb on - strand at 2535.152 kb on + strand at 2535.155 kb on - strand at 2535.160 kb on - strand at 2535.200 kb on + strand at 2535.200 kb on + strand at 2535.208 kb on - strand at 2535.372 kb on + strand at 2535.479 kb on + strand at 2535.503 kb on + strand at 2535.530 kb on - strand at 2535.577 kb on - strand, within Dsui_2385 at 2535.586 kb on + strand at 2535.690 kb on - strand, within Dsui_2385 at 2535.811 kb on + strand at 2535.998 kb on + strand, within Dsui_2385 at 2536.122 kb on - strand, within Dsui_2385 at 2536.134 kb on - strand, within Dsui_2385
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,533,261 - -1.0 2,533,326 + Dsui_2383 0.38 +0.6 2,533,331 + Dsui_2383 0.38 +0.6 2,533,352 + Dsui_2383 0.40 +0.6 2,533,353 + Dsui_2383 0.40 +0.6 2,533,372 + -1.0 2,533,488 + Dsui_2383 0.51 -0.4 2,533,488 + -0.4 2,533,706 - -0.4 2,533,777 - -0.4 2,533,804 - +0.6 2,533,829 + Dsui_2383 0.77 +0.6 2,533,861 - +0.6 2,533,891 + Dsui_2383 0.82 +0.6 2,533,906 + Dsui_2383 0.83 -0.4 2,534,025 + -0.4 2,534,087 + -2.6 2,534,101 - -0.4 2,534,182 + -0.4 2,534,226 + Dsui_2384 0.14 -1.0 2,534,234 - Dsui_2384 0.15 -1.0 2,534,234 - Dsui_2384 0.15 -1.0 2,534,386 - Dsui_2384 0.29 -1.0 2,534,464 + Dsui_2384 0.36 -1.0 2,534,472 - Dsui_2384 0.37 +0.6 2,534,575 - Dsui_2384 0.46 -3.1 2,534,580 - Dsui_2384 0.46 +0.6 2,534,597 + Dsui_2384 0.48 -1.0 2,534,610 + -0.4 2,534,768 - Dsui_2384 0.64 -2.0 2,534,802 - Dsui_2384 0.67 -0.4 2,534,885 - Dsui_2384 0.74 -1.4 2,534,933 + Dsui_2384 0.79 -1.0 2,534,970 + +0.6 2,534,978 - Dsui_2384 0.83 -1.0 2,535,017 + Dsui_2384 0.87 -1.4 2,535,092 - +1.1 2,535,145 - +0.0 2,535,152 + +0.6 2,535,155 - -0.2 2,535,160 - +0.2 2,535,200 + +0.6 2,535,200 + -0.4 2,535,208 - +0.1 2,535,372 + +0.6 2,535,479 + +0.6 2,535,503 + +0.6 2,535,530 - -0.8 2,535,577 - Dsui_2385 0.10 -0.7 2,535,586 + +0.6 2,535,690 - Dsui_2385 0.13 -0.9 2,535,811 + -1.0 2,535,998 + Dsui_2385 0.22 -0.4 2,536,122 - Dsui_2385 0.25 -0.8 2,536,134 - Dsui_2385 0.26 -0.3
Or see this region's nucleotide sequence