Strain Fitness in Dechlorosoma suillum PS around Dsui_2330

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2329 and Dsui_2330 are separated by 131 nucleotidesDsui_2330 and Dsui_2331 are separated by 97 nucleotides Dsui_2329: Dsui_2329 - putative dehydrogenase, at 2,482,287 to 2,483,414 _2329 Dsui_2330: Dsui_2330 - 3-hydroxyacyl-CoA dehydrogenase, at 2,483,546 to 2,484,394 _2330 Dsui_2331: Dsui_2331 - heat shock protein, at 2,484,492 to 2,485,643 _2331 Position (kb) 2483 2484 2485Strain fitness (log2 ratio) -2 -1 0 1at 2482.628 kb on + strandat 2482.671 kb on + strandat 2482.679 kb on - strandat 2482.795 kb on - strand, within Dsui_2329at 2482.822 kb on + strandat 2482.971 kb on + strandat 2482.990 kb on + strandat 2483.082 kb on - strandat 2483.176 kb on - strand, within Dsui_2329at 2483.196 kb on - strand, within Dsui_2329at 2483.196 kb on - strandat 2483.196 kb on - strand, within Dsui_2329at 2483.198 kb on + strandat 2483.475 kb on - strandat 2483.559 kb on - strandat 2483.630 kb on - strandat 2483.641 kb on - strandat 2483.691 kb on + strand, within Dsui_2330at 2483.755 kb on + strand, within Dsui_2330at 2483.780 kb on + strand, within Dsui_2330at 2483.788 kb on - strandat 2483.788 kb on - strand, within Dsui_2330at 2483.986 kb on - strandat 2484.055 kb on + strandat 2484.129 kb on - strand, within Dsui_2330at 2484.228 kb on + strand, within Dsui_2330at 2484.376 kb on + strandat 2484.387 kb on - strandat 2484.591 kb on + strandat 2484.599 kb on - strandat 2484.599 kb on - strandat 2484.996 kb on - strand, within Dsui_2331at 2485.093 kb on + strandat 2485.167 kb on - strand, within Dsui_2331at 2485.209 kb on + strand, within Dsui_2331at 2485.243 kb on - strand, within Dsui_2331

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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2,482,628 + +0.6
2,482,671 + -0.4
2,482,679 - -0.4
2,482,795 - Dsui_2329 0.45 -2.2
2,482,822 + +0.6
2,482,971 + +0.6
2,482,990 + +0.6
2,483,082 - +0.6
2,483,176 - Dsui_2329 0.79 -1.4
2,483,196 - Dsui_2329 0.81 +0.6
2,483,196 - +0.6
2,483,196 - Dsui_2329 0.81 -1.0
2,483,198 + -0.4
2,483,475 - -1.0
2,483,559 - +0.6
2,483,630 - +0.6
2,483,641 - +0.6
2,483,691 + Dsui_2330 0.17 +0.6
2,483,755 + Dsui_2330 0.25 -1.8
2,483,780 + Dsui_2330 0.28 -0.8
2,483,788 - +0.6
2,483,788 - Dsui_2330 0.29 -1.4
2,483,986 - +0.6
2,484,055 + -0.4
2,484,129 - Dsui_2330 0.69 -2.0
2,484,228 + Dsui_2330 0.80 -1.8
2,484,376 + -1.0
2,484,387 - +0.6
2,484,591 + -2.0
2,484,599 - -0.4
2,484,599 - +0.1
2,484,996 - Dsui_2331 0.44 -0.3
2,485,093 + -1.4
2,485,167 - Dsui_2331 0.59 +0.1
2,485,209 + Dsui_2331 0.62 +0.6
2,485,243 - Dsui_2331 0.65 -0.0

Or see this region's nucleotide sequence