Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2327 and Dsui_2328 are separated by 76 nucleotides Dsui_2328 and Dsui_2329 are separated by 57 nucleotides Dsui_2329 and Dsui_2330 are separated by 131 nucleotides
Dsui_2327: Dsui_2327 - putative toxin-antitoxin system toxin component, PIN family, at 2,480,825 to 2,481,295
_2327
Dsui_2328: Dsui_2328 - hypothetical protein, at 2,481,372 to 2,482,229
_2328
Dsui_2329: Dsui_2329 - putative dehydrogenase, at 2,482,287 to 2,483,414
_2329
Dsui_2330: Dsui_2330 - 3-hydroxyacyl-CoA dehydrogenase, at 2,483,546 to 2,484,394
_2330
Position (kb)
2482
2483
2484 Strain fitness (log2 ratio)
-2
-1
0
1 at 2481.447 kb on - strand at 2481.515 kb on + strand at 2481.534 kb on - strand at 2481.642 kb on + strand at 2481.783 kb on - strand at 2482.061 kb on - strand at 2482.312 kb on - strand at 2482.368 kb on - strand at 2482.405 kb on - strand, within Dsui_2329 at 2482.405 kb on - strand, within Dsui_2329 at 2482.472 kb on - strand at 2482.475 kb on + strand at 2482.628 kb on + strand at 2482.671 kb on + strand at 2482.679 kb on - strand at 2482.795 kb on - strand, within Dsui_2329 at 2482.822 kb on + strand at 2482.971 kb on + strand at 2482.990 kb on + strand at 2483.082 kb on - strand at 2483.176 kb on - strand, within Dsui_2329 at 2483.196 kb on - strand, within Dsui_2329 at 2483.196 kb on - strand at 2483.196 kb on - strand, within Dsui_2329 at 2483.198 kb on + strand at 2483.475 kb on - strand at 2483.559 kb on - strand at 2483.630 kb on - strand at 2483.641 kb on - strand at 2483.691 kb on + strand, within Dsui_2330 at 2483.755 kb on + strand, within Dsui_2330 at 2483.780 kb on + strand, within Dsui_2330 at 2483.788 kb on - strand at 2483.788 kb on - strand, within Dsui_2330 at 2483.986 kb on - strand at 2484.055 kb on + strand at 2484.129 kb on - strand, within Dsui_2330 at 2484.228 kb on + strand, within Dsui_2330 at 2484.376 kb on + strand at 2484.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,481,447 - +0.6 2,481,515 + -0.4 2,481,534 - +0.6 2,481,642 + -0.4 2,481,783 - -1.0 2,482,061 - +0.6 2,482,312 - -0.4 2,482,368 - -0.4 2,482,405 - Dsui_2329 0.10 -1.0 2,482,405 - Dsui_2329 0.10 -0.4 2,482,472 - +0.6 2,482,475 + +0.6 2,482,628 + +0.6 2,482,671 + -0.4 2,482,679 - -0.4 2,482,795 - Dsui_2329 0.45 -2.2 2,482,822 + +0.6 2,482,971 + +0.6 2,482,990 + +0.6 2,483,082 - +0.6 2,483,176 - Dsui_2329 0.79 -1.4 2,483,196 - Dsui_2329 0.81 +0.6 2,483,196 - +0.6 2,483,196 - Dsui_2329 0.81 -1.0 2,483,198 + -0.4 2,483,475 - -1.0 2,483,559 - +0.6 2,483,630 - +0.6 2,483,641 - +0.6 2,483,691 + Dsui_2330 0.17 +0.6 2,483,755 + Dsui_2330 0.25 -1.8 2,483,780 + Dsui_2330 0.28 -0.8 2,483,788 - +0.6 2,483,788 - Dsui_2330 0.29 -1.4 2,483,986 - +0.6 2,484,055 + -0.4 2,484,129 - Dsui_2330 0.69 -2.0 2,484,228 + Dsui_2330 0.80 -1.8 2,484,376 + -1.0 2,484,387 - +0.6
Or see this region's nucleotide sequence