Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2232 and Dsui_2233 are separated by 825 nucleotides Dsui_2233 and Dsui_2234 are separated by 260 nucleotides Dsui_2234 and Dsui_2235 are separated by 73 nucleotides
Dsui_2232: Dsui_2232 - hypothetical protein, at 2,373,301 to 2,374,512
_2232
Dsui_2233: Dsui_2233 - catalase/peroxidase HPI, at 2,375,338 to 2,377,518
_2233
Dsui_2234: Dsui_2234 - hypothetical protein, at 2,377,779 to 2,378,162
_2234
Dsui_2235: Dsui_2235 - hypothetical protein, at 2,378,236 to 2,379,120
_2235
Position (kb)
2375
2376
2377
2378 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2374.342 kb on - strand at 2374.342 kb on - strand, within Dsui_2232 at 2374.342 kb on - strand at 2374.342 kb on - strand, within Dsui_2232 at 2374.342 kb on - strand at 2374.344 kb on - strand, within Dsui_2232 at 2374.344 kb on - strand, within Dsui_2232 at 2374.344 kb on - strand at 2374.346 kb on - strand, within Dsui_2232 at 2374.347 kb on - strand at 2374.369 kb on - strand at 2374.382 kb on - strand at 2374.388 kb on - strand at 2374.388 kb on - strand, within Dsui_2232 at 2374.389 kb on - strand, within Dsui_2232 at 2374.398 kb on - strand at 2374.399 kb on - strand at 2374.399 kb on - strand at 2374.399 kb on - strand at 2374.399 kb on - strand at 2374.399 kb on - strand at 2374.399 kb on - strand at 2374.400 kb on - strand at 2374.400 kb on - strand at 2374.420 kb on - strand at 2374.420 kb on - strand at 2374.433 kb on - strand at 2374.433 kb on - strand at 2374.433 kb on - strand at 2374.434 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.444 kb on - strand at 2374.446 kb on - strand at 2374.446 kb on - strand at 2374.453 kb on - strand at 2374.454 kb on - strand at 2374.455 kb on - strand at 2374.455 kb on - strand at 2374.463 kb on - strand at 2374.463 kb on - strand at 2374.464 kb on - strand at 2374.465 kb on - strand at 2374.465 kb on - strand at 2374.468 kb on - strand at 2374.473 kb on - strand at 2374.476 kb on + strand at 2374.476 kb on + strand at 2374.478 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.484 kb on - strand at 2374.494 kb on - strand at 2374.494 kb on - strand at 2374.502 kb on - strand at 2374.502 kb on - strand at 2374.502 kb on - strand at 2374.515 kb on - strand at 2374.515 kb on - strand at 2374.515 kb on - strand at 2374.515 kb on - strand at 2374.515 kb on - strand at 2374.515 kb on - strand at 2374.522 kb on - strand at 2374.522 kb on - strand at 2374.528 kb on - strand at 2374.531 kb on - strand at 2374.535 kb on - strand at 2374.535 kb on - strand at 2374.537 kb on - strand at 2374.542 kb on - strand at 2374.542 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.549 kb on - strand at 2374.556 kb on - strand at 2374.563 kb on - strand at 2374.568 kb on - strand at 2374.581 kb on - strand at 2374.583 kb on + strand at 2374.589 kb on - strand at 2374.589 kb on - strand at 2374.590 kb on - strand at 2374.594 kb on - strand at 2374.596 kb on - strand at 2374.600 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.606 kb on - strand at 2374.617 kb on - strand at 2374.617 kb on - strand at 2374.630 kb on - strand at 2374.653 kb on - strand at 2374.653 kb on - strand at 2374.653 kb on - strand at 2374.653 kb on - strand at 2374.659 kb on - strand at 2374.659 kb on - strand at 2374.671 kb on - strand at 2374.677 kb on - strand at 2374.682 kb on - strand at 2374.682 kb on - strand at 2374.682 kb on - strand at 2374.691 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.692 kb on - strand at 2374.694 kb on - strand at 2374.697 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.700 kb on - strand at 2374.721 kb on - strand at 2374.768 kb on - strand at 2374.780 kb on - strand at 2374.780 kb on - strand at 2374.780 kb on - strand at 2374.780 kb on - strand at 2374.780 kb on - strand at 2374.785 kb on - strand at 2374.787 kb on - strand at 2374.798 kb on - strand at 2374.817 kb on - strand at 2374.817 kb on - strand at 2374.817 kb on - strand at 2374.823 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.824 kb on - strand at 2374.854 kb on - strand at 2374.856 kb on - strand at 2374.856 kb on - strand at 2374.856 kb on - strand at 2374.856 kb on - strand at 2374.859 kb on - strand at 2374.864 kb on - strand at 2374.872 kb on - strand at 2374.872 kb on - strand at 2374.895 kb on - strand at 2374.895 kb on - strand at 2374.906 kb on - strand at 2374.914 kb on - strand at 2374.915 kb on - strand at 2374.920 kb on - strand at 2374.931 kb on - strand at 2374.942 kb on - strand at 2374.959 kb on - strand at 2374.961 kb on - strand at 2374.961 kb on - strand at 2374.966 kb on - strand at 2374.972 kb on - strand at 2374.983 kb on - strand at 2374.995 kb on - strand at 2374.996 kb on - strand at 2374.997 kb on - strand at 2375.004 kb on - strand at 2375.005 kb on - strand at 2375.024 kb on - strand at 2375.029 kb on - strand at 2375.029 kb on - strand at 2375.052 kb on - strand at 2375.082 kb on - strand at 2375.105 kb on - strand at 2375.106 kb on - strand at 2375.106 kb on - strand at 2375.129 kb on - strand at 2375.165 kb on - strand at 2375.188 kb on - strand at 2375.259 kb on - strand at 2375.297 kb on - strand at 2375.422 kb on - strand at 2375.459 kb on - strand at 2375.800 kb on - strand, within Dsui_2233 at 2375.810 kb on - strand, within Dsui_2233 at 2375.829 kb on - strand, within Dsui_2233 at 2375.830 kb on - strand, within Dsui_2233 at 2375.856 kb on - strand, within Dsui_2233 at 2375.989 kb on + strand at 2376.146 kb on + strand at 2376.284 kb on - strand, within Dsui_2233 at 2376.306 kb on - strand, within Dsui_2233 at 2376.346 kb on + strand at 2376.411 kb on - strand at 2376.519 kb on + strand at 2376.643 kb on - strand, within Dsui_2233 at 2376.673 kb on - strand, within Dsui_2233 at 2376.738 kb on - strand, within Dsui_2233 at 2376.791 kb on + strand at 2376.808 kb on - strand at 2376.868 kb on - strand, within Dsui_2233 at 2376.921 kb on - strand, within Dsui_2233 at 2377.053 kb on - strand, within Dsui_2233 at 2377.224 kb on - strand, within Dsui_2233 at 2377.239 kb on - strand, within Dsui_2233 at 2377.286 kb on + strand, within Dsui_2233 at 2377.288 kb on + strand at 2377.341 kb on - strand at 2377.358 kb on - strand at 2377.392 kb on + strand at 2377.416 kb on - strand at 2377.484 kb on - strand at 2377.485 kb on - strand at 2377.546 kb on - strand at 2377.559 kb on - strand at 2377.559 kb on - strand at 2377.657 kb on + strand at 2377.676 kb on + strand at 2377.684 kb on - strand at 2377.784 kb on - strand at 2377.911 kb on - strand, within Dsui_2234 at 2377.936 kb on - strand, within Dsui_2234 at 2378.035 kb on + strand, within Dsui_2234 at 2378.072 kb on - strand, within Dsui_2234 at 2378.165 kb on - strand at 2378.239 kb on + strand at 2378.292 kb on + strand at 2378.300 kb on - strand at 2378.353 kb on - strand, within Dsui_2235
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,374,342 - +0.6 2,374,342 - Dsui_2232 0.86 -2.0 2,374,342 - -1.0 2,374,342 - Dsui_2232 0.86 +0.6 2,374,342 - -0.4 2,374,344 - Dsui_2232 0.86 +0.6 2,374,344 - Dsui_2232 0.86 -1.0 2,374,344 - +0.6 2,374,346 - Dsui_2232 0.86 -1.0 2,374,347 - +0.6 2,374,369 - +0.6 2,374,382 - +0.6 2,374,388 - +0.6 2,374,388 - Dsui_2232 0.90 -0.4 2,374,389 - Dsui_2232 0.90 -0.4 2,374,398 - -1.0 2,374,399 - -1.4 2,374,399 - +0.6 2,374,399 - -1.0 2,374,399 - -0.4 2,374,399 - +0.6 2,374,399 - +0.6 2,374,400 - -0.4 2,374,400 - +0.6 2,374,420 - -0.4 2,374,420 - +0.6 2,374,433 - -0.4 2,374,433 - +0.6 2,374,433 - -0.4 2,374,434 - +0.6 2,374,444 - -1.7 2,374,444 - +0.6 2,374,444 - -0.4 2,374,444 - -2.8 2,374,444 - -2.4 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - -0.4 2,374,444 - -0.4 2,374,444 - -1.0 2,374,444 - +0.6 2,374,444 - -1.7 2,374,444 - -1.7 2,374,444 - +0.6 2,374,444 - -1.7 2,374,444 - +0.6 2,374,444 - -0.4 2,374,444 - -2.2 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - +0.6 2,374,444 - -0.4 2,374,444 - +0.6 2,374,444 - -1.7 2,374,444 - -0.4 2,374,444 - +0.6 2,374,444 - -1.4 2,374,444 - +0.6 2,374,444 - -0.4 2,374,444 - +0.6 2,374,444 - -1.4 2,374,444 - -0.4 2,374,444 - +0.6 2,374,444 - +0.6 2,374,446 - -0.4 2,374,446 - -0.4 2,374,453 - +0.6 2,374,454 - +0.6 2,374,455 - +0.6 2,374,455 - +0.6 2,374,463 - -0.4 2,374,463 - +0.6 2,374,464 - +0.6 2,374,465 - -1.4 2,374,465 - +0.6 2,374,468 - +0.6 2,374,473 - -0.4 2,374,476 + +0.0 2,374,476 + -0.1 2,374,478 - -0.4 2,374,484 - -1.4 2,374,484 - -0.4 2,374,484 - +0.6 2,374,484 - -1.4 2,374,484 - -0.4 2,374,484 - -0.4 2,374,484 - -0.4 2,374,484 - +0.6 2,374,484 - -2.2 2,374,484 - +0.6 2,374,484 - +0.6 2,374,484 - -1.7 2,374,484 - +0.6 2,374,484 - +0.6 2,374,484 - -0.4 2,374,484 - -1.0 2,374,484 - -1.7 2,374,484 - -0.4 2,374,484 - +0.6 2,374,484 - -1.0 2,374,484 - -2.0 2,374,484 - +0.6 2,374,484 - -2.0 2,374,484 - +0.6 2,374,484 - -1.0 2,374,484 - -1.7 2,374,484 - -0.4 2,374,484 - +0.6 2,374,484 - +0.6 2,374,484 - -0.4 2,374,484 - +0.6 2,374,484 - +0.6 2,374,484 - -1.0 2,374,484 - -1.0 2,374,484 - -0.4 2,374,484 - -2.2 2,374,484 - -1.4 2,374,484 - +0.6 2,374,484 - -0.4 2,374,484 - -0.4 2,374,484 - -0.4 2,374,484 - +0.6 2,374,484 - +0.6 2,374,484 - -1.0 2,374,494 - -1.4 2,374,494 - -0.4 2,374,502 - -1.4 2,374,502 - +0.6 2,374,502 - -1.7 2,374,515 - +0.6 2,374,515 - -0.4 2,374,515 - +0.6 2,374,515 - -0.4 2,374,515 - +0.6 2,374,515 - -1.0 2,374,522 - +0.6 2,374,522 - -1.0 2,374,528 - -1.0 2,374,531 - -0.4 2,374,535 - -1.4 2,374,535 - +0.6 2,374,537 - -0.4 2,374,542 - -1.0 2,374,542 - -0.4 2,374,549 - +0.6 2,374,549 - +0.6 2,374,549 - +0.6 2,374,549 - +0.6 2,374,549 - -0.4 2,374,549 - +0.6 2,374,549 - -1.0 2,374,549 - -1.0 2,374,549 - +0.6 2,374,549 - -1.7 2,374,549 - +0.6 2,374,549 - -1.4 2,374,549 - +0.6 2,374,549 - -2.0 2,374,556 - +0.6 2,374,563 - -0.4 2,374,568 - -0.4 2,374,581 - +0.6 2,374,583 + +0.0 2,374,589 - -1.0 2,374,589 - -0.4 2,374,590 - -0.4 2,374,594 - +0.6 2,374,596 - +0.6 2,374,600 - -1.7 2,374,606 - +0.6 2,374,606 - -0.4 2,374,606 - -0.4 2,374,606 - +0.6 2,374,606 - -1.0 2,374,606 - +0.6 2,374,606 - +0.6 2,374,606 - -0.4 2,374,606 - +0.6 2,374,606 - -1.4 2,374,606 - -0.4 2,374,606 - +0.6 2,374,606 - -1.0 2,374,606 - -0.4 2,374,617 - +0.6 2,374,617 - +0.6 2,374,630 - -0.4 2,374,653 - -0.4 2,374,653 - +0.6 2,374,653 - +0.6 2,374,653 - +0.6 2,374,659 - -1.7 2,374,659 - +0.6 2,374,671 - +0.6 2,374,677 - -0.4 2,374,682 - +0.6 2,374,682 - +0.6 2,374,682 - -0.4 2,374,691 - +0.6 2,374,692 - +0.6 2,374,692 - +0.6 2,374,692 - -0.4 2,374,692 - -0.4 2,374,692 - -0.4 2,374,692 - -0.4 2,374,692 - -1.0 2,374,692 - +0.6 2,374,692 - -0.4 2,374,692 - +0.6 2,374,692 - -2.0 2,374,692 - +0.6 2,374,692 - +0.6 2,374,692 - +0.6 2,374,694 - +0.6 2,374,697 - -1.0 2,374,700 - +0.6 2,374,700 - +0.6 2,374,700 - -0.4 2,374,700 - +0.6 2,374,700 - +0.6 2,374,700 - -0.4 2,374,700 - -0.4 2,374,700 - +0.6 2,374,721 - +0.6 2,374,768 - -0.4 2,374,780 - -0.4 2,374,780 - +0.6 2,374,780 - -1.0 2,374,780 - +0.6 2,374,780 - +0.6 2,374,785 - -0.4 2,374,787 - -1.0 2,374,798 - -1.4 2,374,817 - +0.6 2,374,817 - -0.4 2,374,817 - +0.6 2,374,823 - +0.6 2,374,824 - +0.6 2,374,824 - +0.6 2,374,824 - +0.6 2,374,824 - +0.6 2,374,824 - -0.4 2,374,824 - -1.0 2,374,824 - +0.6 2,374,824 - +0.6 2,374,824 - +2.9 2,374,824 - +0.6 2,374,824 - -1.4 2,374,824 - +0.6 2,374,824 - +0.6 2,374,824 - -1.0 2,374,854 - -1.4 2,374,856 - +0.6 2,374,856 - +0.6 2,374,856 - +0.6 2,374,856 - +0.6 2,374,859 - -1.4 2,374,864 - -1.0 2,374,872 - -0.4 2,374,872 - +0.6 2,374,895 - -0.4 2,374,895 - +0.6 2,374,906 - -0.4 2,374,914 - -0.4 2,374,915 - +0.6 2,374,920 - +0.6 2,374,931 - -0.4 2,374,942 - -0.4 2,374,959 - +0.6 2,374,961 - -1.0 2,374,961 - -2.2 2,374,966 - -0.4 2,374,972 - -0.4 2,374,983 - +0.6 2,374,995 - -0.4 2,374,996 - -0.4 2,374,997 - +0.6 2,375,004 - -0.4 2,375,005 - -0.4 2,375,024 - +0.6 2,375,029 - -1.7 2,375,029 - -1.7 2,375,052 - -1.4 2,375,082 - -2.7 2,375,105 - -0.4 2,375,106 - +0.6 2,375,106 - +0.6 2,375,129 - -2.0 2,375,165 - -1.0 2,375,188 - -1.4 2,375,259 - +0.6 2,375,297 - -0.4 2,375,422 - +0.6 2,375,459 - -2.2 2,375,800 - Dsui_2233 0.21 -1.0 2,375,810 - Dsui_2233 0.22 -1.7 2,375,829 - Dsui_2233 0.23 -1.4 2,375,830 - Dsui_2233 0.23 +0.6 2,375,856 - Dsui_2233 0.24 +0.6 2,375,989 + -1.0 2,376,146 + +0.6 2,376,284 - Dsui_2233 0.43 -1.4 2,376,306 - Dsui_2233 0.44 -0.4 2,376,346 + +0.6 2,376,411 - +0.6 2,376,519 + +0.6 2,376,643 - Dsui_2233 0.60 +0.6 2,376,673 - Dsui_2233 0.61 +0.6 2,376,738 - Dsui_2233 0.64 -1.0 2,376,791 + +0.6 2,376,808 - +0.6 2,376,868 - Dsui_2233 0.70 -0.4 2,376,921 - Dsui_2233 0.73 +0.6 2,377,053 - Dsui_2233 0.79 +0.6 2,377,224 - Dsui_2233 0.86 -3.0 2,377,239 - Dsui_2233 0.87 +0.6 2,377,286 + Dsui_2233 0.89 -1.7 2,377,288 + -0.4 2,377,341 - +0.6 2,377,358 - +0.6 2,377,392 + +0.6 2,377,416 - +0.6 2,377,484 - +0.6 2,377,485 - -2.0 2,377,546 - +0.6 2,377,559 - +0.6 2,377,559 - +0.6 2,377,657 + +0.6 2,377,676 + -0.4 2,377,684 - -0.4 2,377,784 - +0.0 2,377,911 - Dsui_2234 0.34 -0.4 2,377,936 - Dsui_2234 0.41 +0.6 2,378,035 + Dsui_2234 0.67 -0.9 2,378,072 - Dsui_2234 0.76 +0.6 2,378,165 - +0.6 2,378,239 + +0.6 2,378,292 + +0.6 2,378,300 - -0.4 2,378,353 - Dsui_2235 0.13 -1.0
Or see this region's nucleotide sequence