Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1669 and Dsui_1670 are separated by 28 nucleotides Dsui_1670 and Dsui_1671 are separated by 8 nucleotides
Dsui_1669: Dsui_1669 - trypsin-like serine protease with C-terminal PDZ domain, at 1,754,072 to 1,755,490
_1669
Dsui_1670: Dsui_1670 - cytochrome c peroxidase, at 1,755,519 to 1,756,628
_1670
Dsui_1671: Dsui_1671 - outer membrane receptor for ferrienterochelin and colicins, at 1,756,637 to 1,759,483
_1671
Position (kb)
1755
1756
1757 Strain fitness (log2 ratio)
-2
-1
0
1 at 1754.718 kb on + strand at 1754.872 kb on - strand, within Dsui_1669 at 1754.969 kb on + strand, within Dsui_1669 at 1755.166 kb on + strand at 1755.171 kb on - strand, within Dsui_1669 at 1755.184 kb on - strand at 1755.370 kb on + strand at 1755.462 kb on - strand at 1755.515 kb on - strand at 1755.562 kb on - strand at 1755.676 kb on + strand at 1755.684 kb on - strand, within Dsui_1670 at 1755.717 kb on + strand, within Dsui_1670 at 1755.782 kb on + strand at 1755.835 kb on - strand, within Dsui_1670 at 1755.913 kb on - strand at 1756.039 kb on - strand, within Dsui_1670 at 1756.057 kb on + strand at 1756.214 kb on - strand at 1756.351 kb on - strand, within Dsui_1670 at 1756.351 kb on - strand, within Dsui_1670 at 1756.443 kb on + strand at 1756.568 kb on - strand at 1756.740 kb on + strand at 1756.826 kb on - strand at 1756.865 kb on + strand at 1756.968 kb on - strand at 1756.985 kb on - strand, within Dsui_1671 at 1757.179 kb on + strand at 1757.180 kb on + strand, within Dsui_1671 at 1757.185 kb on + strand, within Dsui_1671 at 1757.185 kb on + strand, within Dsui_1671 at 1757.193 kb on - strand at 1757.220 kb on + strand, within Dsui_1671 at 1757.269 kb on + strand at 1757.269 kb on + strand, within Dsui_1671 at 1757.273 kb on + strand, within Dsui_1671 at 1757.274 kb on + strand, within Dsui_1671 at 1757.277 kb on - strand, within Dsui_1671 at 1757.287 kb on - strand at 1757.338 kb on - strand at 1757.400 kb on + strand, within Dsui_1671 at 1757.415 kb on + strand at 1757.415 kb on + strand, within Dsui_1671 at 1757.415 kb on + strand at 1757.423 kb on - strand at 1757.468 kb on + strand, within Dsui_1671 at 1757.475 kb on - strand at 1757.476 kb on - strand at 1757.569 kb on + strand, within Dsui_1671 at 1757.607 kb on - strand, within Dsui_1671
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,754,718 + +0.4 1,754,872 - Dsui_1669 0.56 -2.4 1,754,969 + Dsui_1669 0.63 -1.1 1,755,166 + +0.4 1,755,171 - Dsui_1669 0.77 -1.6 1,755,184 - +0.4 1,755,370 + +0.4 1,755,462 - -2.2 1,755,515 - +0.4 1,755,562 - -0.3 1,755,676 + +0.4 1,755,684 - Dsui_1670 0.15 -0.6 1,755,717 + Dsui_1670 0.18 -1.2 1,755,782 + -1.2 1,755,835 - Dsui_1670 0.28 -2.6 1,755,913 - -1.2 1,756,039 - Dsui_1670 0.47 -0.6 1,756,057 + -0.6 1,756,214 - -0.6 1,756,351 - Dsui_1670 0.75 -1.2 1,756,351 - Dsui_1670 0.75 -0.6 1,756,443 + -0.6 1,756,568 - +0.4 1,756,740 + -0.6 1,756,826 - -1.9 1,756,865 + -0.6 1,756,968 - +0.4 1,756,985 - Dsui_1671 0.12 -0.6 1,757,179 + -0.6 1,757,180 + Dsui_1671 0.19 +0.4 1,757,185 + Dsui_1671 0.19 -1.3 1,757,185 + Dsui_1671 0.19 -1.6 1,757,193 - -0.6 1,757,220 + Dsui_1671 0.20 +0.4 1,757,269 + +0.4 1,757,269 + Dsui_1671 0.22 -0.6 1,757,273 + Dsui_1671 0.22 -0.6 1,757,274 + Dsui_1671 0.22 -1.7 1,757,277 - Dsui_1671 0.22 -0.6 1,757,287 - -0.6 1,757,338 - +0.4 1,757,400 + Dsui_1671 0.27 +0.4 1,757,415 + +0.4 1,757,415 + Dsui_1671 0.27 -1.2 1,757,415 + -0.6 1,757,423 - +0.4 1,757,468 + Dsui_1671 0.29 -1.2 1,757,475 - -0.6 1,757,476 - +0.4 1,757,569 + Dsui_1671 0.33 -1.9 1,757,607 - Dsui_1671 0.34 -1.2
Or see this region's nucleotide sequence