Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1663 and Dsui_1664 are separated by 101 nucleotides Dsui_1664 and Dsui_1665 are separated by 33 nucleotides Dsui_1665 and Dsui_1666 overlap by 16 nucleotides Dsui_1666 and Dsui_1667 are separated by 79 nucleotides
Dsui_1663: Dsui_1663 - ABC-type Co2+ transport system, periplasmic component, at 1,747,425 to 1,748,228
_1663
Dsui_1664: Dsui_1664 - putative periplasmic protein, at 1,748,330 to 1,748,854
_1664
Dsui_1665: Dsui_1665 - hypothetical protein, at 1,748,888 to 1,749,547
_1665
Dsui_1666: Dsui_1666 - putative iron-regulated protein, at 1,749,532 to 1,750,212
_1666
Dsui_1667: Dsui_1667 - TonB-dependent siderophore receptor, at 1,750,292 to 1,752,595
_1667
Position (kb)
1748
1749
1750 Strain fitness (log2 ratio)
-2
-1
0
1 at 1747.892 kb on + strand, within Dsui_1663 at 1747.900 kb on - strand, within Dsui_1663 at 1747.939 kb on + strand, within Dsui_1663 at 1747.947 kb on - strand, within Dsui_1663 at 1748.093 kb on - strand, within Dsui_1663 at 1748.116 kb on + strand at 1748.116 kb on + strand at 1748.116 kb on + strand, within Dsui_1663 at 1748.276 kb on - strand at 1748.289 kb on + strand at 1748.290 kb on - strand at 1748.290 kb on - strand at 1748.290 kb on - strand at 1748.290 kb on - strand at 1748.328 kb on + strand at 1748.336 kb on - strand at 1748.341 kb on + strand at 1748.349 kb on - strand at 1748.371 kb on + strand at 1748.439 kb on - strand, within Dsui_1664 at 1748.439 kb on - strand, within Dsui_1664 at 1748.550 kb on - strand, within Dsui_1664 at 1748.564 kb on + strand, within Dsui_1664 at 1748.661 kb on + strand at 1748.735 kb on - strand, within Dsui_1664 at 1748.906 kb on + strand at 1748.935 kb on + strand at 1748.949 kb on - strand at 1749.069 kb on + strand, within Dsui_1665 at 1749.077 kb on - strand, within Dsui_1665 at 1749.154 kb on + strand, within Dsui_1665 at 1749.185 kb on - strand, within Dsui_1665 at 1749.358 kb on - strand, within Dsui_1665 at 1749.513 kb on + strand at 1749.530 kb on + strand at 1749.538 kb on - strand at 1749.538 kb on - strand at 1750.221 kb on + strand at 1750.235 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,747,892 + Dsui_1663 0.58 -1.9 1,747,900 - Dsui_1663 0.59 -0.1 1,747,939 + Dsui_1663 0.64 -1.2 1,747,947 - Dsui_1663 0.65 +0.1 1,748,093 - Dsui_1663 0.83 -0.4 1,748,116 + +0.4 1,748,116 + +0.4 1,748,116 + Dsui_1663 0.86 +0.4 1,748,276 - -0.5 1,748,289 + -1.1 1,748,290 - -0.2 1,748,290 - +0.5 1,748,290 - +0.2 1,748,290 - -0.7 1,748,328 + -0.6 1,748,336 - -0.2 1,748,341 + -1.6 1,748,349 - +0.0 1,748,371 + +0.4 1,748,439 - Dsui_1664 0.21 -0.3 1,748,439 - Dsui_1664 0.21 -0.2 1,748,550 - Dsui_1664 0.42 +0.2 1,748,564 + Dsui_1664 0.45 -1.1 1,748,661 + +0.4 1,748,735 - Dsui_1664 0.77 -0.1 1,748,906 + -1.9 1,748,935 + +0.4 1,748,949 - +0.2 1,749,069 + Dsui_1665 0.27 -2.1 1,749,077 - Dsui_1665 0.29 -0.1 1,749,154 + Dsui_1665 0.40 -2.1 1,749,185 - Dsui_1665 0.45 -0.3 1,749,358 - Dsui_1665 0.71 -0.6 1,749,513 + -1.1 1,749,530 + -0.6 1,749,538 - -0.2 1,749,538 - -0.4 1,750,221 + -0.6 1,750,235 + +0.4
Or see this region's nucleotide sequence