Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1368 and Dsui_1369 are separated by 50 nucleotides Dsui_1369 and Dsui_1370 are separated by 141 nucleotides Dsui_1370 and Dsui_1371 are separated by 103 nucleotides
Dsui_1368: Dsui_1368 - hypothetical protein, at 1,422,030 to 1,422,866
_1368
Dsui_1369: Dsui_1369 - hypothetical protein, at 1,422,917 to 1,423,207
_1369
Dsui_1370: Dsui_1370 - putative permease, DMT superfamily, at 1,423,349 to 1,424,251
_1370
Dsui_1371: Dsui_1371 - transcriptional regulator, at 1,424,355 to 1,425,254
_1371
Position (kb)
1423
1424
1425 Strain fitness (log2 ratio)
-2
-1
0
1 at 1422.350 kb on - strand at 1422.453 kb on + strand, within Dsui_1368 at 1422.466 kb on - strand, within Dsui_1368 at 1422.569 kb on + strand at 1422.569 kb on + strand, within Dsui_1368 at 1422.667 kb on - strand at 1422.713 kb on - strand at 1422.715 kb on + strand at 1422.743 kb on + strand, within Dsui_1368 at 1422.743 kb on + strand, within Dsui_1368 at 1422.751 kb on - strand at 1422.804 kb on + strand at 1422.812 kb on - strand at 1422.827 kb on + strand at 1422.904 kb on - strand at 1422.929 kb on + strand at 1423.056 kb on + strand at 1423.086 kb on + strand, within Dsui_1369 at 1423.108 kb on + strand, within Dsui_1369 at 1423.115 kb on + strand at 1423.116 kb on - strand, within Dsui_1369 at 1423.116 kb on - strand at 1423.169 kb on + strand at 1423.202 kb on + strand at 1423.217 kb on - strand at 1423.224 kb on - strand at 1423.297 kb on + strand at 1423.369 kb on + strand at 1423.472 kb on - strand at 1423.496 kb on + strand, within Dsui_1370 at 1423.557 kb on + strand at 1423.565 kb on - strand, within Dsui_1370 at 1423.569 kb on - strand, within Dsui_1370 at 1423.613 kb on - strand, within Dsui_1370 at 1423.641 kb on - strand, within Dsui_1370 at 1423.772 kb on - strand at 1423.828 kb on - strand at 1423.943 kb on + strand, within Dsui_1370 at 1423.953 kb on + strand, within Dsui_1370 at 1423.966 kb on - strand, within Dsui_1370 at 1423.971 kb on - strand, within Dsui_1370 at 1424.107 kb on + strand, within Dsui_1370 at 1424.135 kb on + strand at 1424.156 kb on - strand at 1424.164 kb on + strand at 1424.258 kb on + strand at 1424.286 kb on - strand at 1424.289 kb on + strand at 1424.444 kb on - strand at 1424.457 kb on + strand, within Dsui_1371 at 1424.638 kb on + strand, within Dsui_1371 at 1424.638 kb on + strand, within Dsui_1371 at 1424.646 kb on - strand at 1424.684 kb on - strand, within Dsui_1371 at 1424.707 kb on + strand, within Dsui_1371 at 1424.730 kb on + strand, within Dsui_1371 at 1424.866 kb on - strand, within Dsui_1371 at 1424.900 kb on + strand, within Dsui_1371 at 1424.921 kb on - strand, within Dsui_1371 at 1424.958 kb on + strand, within Dsui_1371 at 1424.966 kb on - strand, within Dsui_1371 at 1425.040 kb on + strand, within Dsui_1371 at 1425.056 kb on - strand, within Dsui_1371 at 1425.060 kb on + strand, within Dsui_1371 at 1425.138 kb on - strand, within Dsui_1371 at 1425.142 kb on - strand at 1425.210 kb on + strand at 1425.210 kb on + strand at 1425.210 kb on + strand at 1425.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,422,350 - +0.4 1,422,453 + Dsui_1368 0.51 -1.2 1,422,466 - Dsui_1368 0.52 -1.2 1,422,569 + -0.6 1,422,569 + Dsui_1368 0.64 -1.2 1,422,667 - +0.4 1,422,713 - +0.4 1,422,715 + +0.4 1,422,743 + Dsui_1368 0.85 +0.4 1,422,743 + Dsui_1368 0.85 +0.4 1,422,751 - +0.4 1,422,804 + -1.6 1,422,812 - -0.6 1,422,827 + +0.4 1,422,904 - -0.6 1,422,929 + +0.4 1,423,056 + +0.4 1,423,086 + Dsui_1369 0.58 -0.6 1,423,108 + Dsui_1369 0.66 +0.4 1,423,115 + -1.9 1,423,116 - Dsui_1369 0.68 -1.6 1,423,116 - -0.6 1,423,169 + -0.6 1,423,202 + -1.2 1,423,217 - -0.6 1,423,224 - -2.6 1,423,297 + +0.4 1,423,369 + -1.2 1,423,472 - +0.4 1,423,496 + Dsui_1370 0.16 -1.2 1,423,557 + +0.4 1,423,565 - Dsui_1370 0.24 -2.4 1,423,569 - Dsui_1370 0.24 -1.2 1,423,613 - Dsui_1370 0.29 +0.4 1,423,641 - Dsui_1370 0.32 +0.4 1,423,772 - +0.4 1,423,828 - -0.6 1,423,943 + Dsui_1370 0.66 -1.6 1,423,953 + Dsui_1370 0.67 -1.2 1,423,966 - Dsui_1370 0.68 -1.9 1,423,971 - Dsui_1370 0.69 -1.6 1,424,107 + Dsui_1370 0.84 -0.6 1,424,135 + +0.4 1,424,156 - -0.6 1,424,164 + +0.4 1,424,258 + +0.4 1,424,286 - +0.4 1,424,289 + +0.4 1,424,444 - +0.4 1,424,457 + Dsui_1371 0.11 -0.3 1,424,638 + Dsui_1371 0.31 -0.5 1,424,638 + Dsui_1371 0.31 -0.2 1,424,646 - +0.4 1,424,684 - Dsui_1371 0.37 -0.6 1,424,707 + Dsui_1371 0.39 +0.1 1,424,730 + Dsui_1371 0.42 -0.2 1,424,866 - Dsui_1371 0.57 +0.4 1,424,900 + Dsui_1371 0.61 -0.2 1,424,921 - Dsui_1371 0.63 +0.4 1,424,958 + Dsui_1371 0.67 -0.2 1,424,966 - Dsui_1371 0.68 -1.9 1,425,040 + Dsui_1371 0.76 -0.4 1,425,056 - Dsui_1371 0.78 -2.2 1,425,060 + Dsui_1371 0.78 -0.3 1,425,138 - Dsui_1371 0.87 -0.6 1,425,142 - +0.4 1,425,210 + -0.2 1,425,210 + -0.5 1,425,210 + -0.5 1,425,218 - +0.1
Or see this region's nucleotide sequence