Strain Fitness in Dechlorosoma suillum PS around Dsui_1367

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1366 and Dsui_1367 are separated by 120 nucleotidesDsui_1367 and Dsui_1368 are separated by 8 nucleotidesDsui_1368 and Dsui_1369 are separated by 50 nucleotides Dsui_1366: Dsui_1366 - glutaminyl-tRNA synthetase, at 1,419,730 to 1,421,511 _1366 Dsui_1367: Dsui_1367 - crcB protein, at 1,421,632 to 1,422,021 _1367 Dsui_1368: Dsui_1368 - hypothetical protein, at 1,422,030 to 1,422,866 _1368 Dsui_1369: Dsui_1369 - hypothetical protein, at 1,422,917 to 1,423,207 _1369 Position (kb) 1421 1422 1423Strain fitness (log2 ratio) -3 -2 -1 0 1at 1421.588 kb on - strandat 1421.609 kb on + strandat 1421.609 kb on + strandat 1421.609 kb on + strandat 1421.609 kb on + strandat 1421.609 kb on + strandat 1421.617 kb on - strandat 1421.617 kb on - strandat 1421.624 kb on + strandat 1421.624 kb on - strandat 1421.632 kb on - strandat 1421.709 kb on + strand, within Dsui_1367at 1421.721 kb on + strand, within Dsui_1367at 1421.724 kb on - strand, within Dsui_1367at 1421.724 kb on - strandat 1421.780 kb on + strand, within Dsui_1367at 1421.814 kb on + strand, within Dsui_1367at 1421.815 kb on - strandat 1421.826 kb on + strand, within Dsui_1367at 1421.947 kb on - strand, within Dsui_1367at 1422.015 kb on + strandat 1422.092 kb on - strandat 1422.103 kb on - strandat 1422.110 kb on - strandat 1422.152 kb on + strand, within Dsui_1368at 1422.171 kb on - strandat 1422.175 kb on - strandat 1422.191 kb on - strand, within Dsui_1368at 1422.217 kb on - strand, within Dsui_1368at 1422.225 kb on - strand, within Dsui_1368at 1422.239 kb on + strand, within Dsui_1368at 1422.247 kb on - strand, within Dsui_1368at 1422.350 kb on - strandat 1422.453 kb on + strand, within Dsui_1368at 1422.466 kb on - strand, within Dsui_1368at 1422.569 kb on + strandat 1422.569 kb on + strand, within Dsui_1368at 1422.667 kb on - strandat 1422.713 kb on - strandat 1422.715 kb on + strandat 1422.743 kb on + strand, within Dsui_1368at 1422.743 kb on + strand, within Dsui_1368at 1422.751 kb on - strandat 1422.804 kb on + strandat 1422.812 kb on - strandat 1422.827 kb on + strandat 1422.904 kb on - strandat 1422.929 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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1,421,588 - -0.6
1,421,609 + +0.1
1,421,609 + -1.7
1,421,609 + -1.6
1,421,609 + +0.4
1,421,609 + -2.5
1,421,617 - -0.6
1,421,617 - +0.4
1,421,624 + -1.2
1,421,624 - +0.4
1,421,632 - -0.6
1,421,709 + Dsui_1367 0.20 -0.2
1,421,721 + Dsui_1367 0.23 -0.3
1,421,724 - Dsui_1367 0.24 +0.4
1,421,724 - +0.4
1,421,780 + Dsui_1367 0.38 -0.3
1,421,814 + Dsui_1367 0.47 -0.4
1,421,815 - +0.4
1,421,826 + Dsui_1367 0.50 -1.2
1,421,947 - Dsui_1367 0.81 -1.9
1,422,015 + -0.6
1,422,092 - +0.4
1,422,103 - +0.4
1,422,110 - -0.6
1,422,152 + Dsui_1368 0.15 -3.6
1,422,171 - -0.6
1,422,175 - -1.2
1,422,191 - Dsui_1368 0.19 -0.6
1,422,217 - Dsui_1368 0.22 -1.2
1,422,225 - Dsui_1368 0.23 -1.2
1,422,239 + Dsui_1368 0.25 -2.6
1,422,247 - Dsui_1368 0.26 -2.2
1,422,350 - +0.4
1,422,453 + Dsui_1368 0.51 -1.2
1,422,466 - Dsui_1368 0.52 -1.2
1,422,569 + -0.6
1,422,569 + Dsui_1368 0.64 -1.2
1,422,667 - +0.4
1,422,713 - +0.4
1,422,715 + +0.4
1,422,743 + Dsui_1368 0.85 +0.4
1,422,743 + Dsui_1368 0.85 +0.4
1,422,751 - +0.4
1,422,804 + -1.6
1,422,812 - -0.6
1,422,827 + +0.4
1,422,904 - -0.6
1,422,929 + +0.4

Or see this region's nucleotide sequence