Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1309 and Dsui_1310 are separated by 97 nucleotides Dsui_1310 and Dsui_1311 are separated by 85 nucleotides Dsui_1311 and Dsui_1312 are separated by 168 nucleotides Dsui_1312 and Dsui_1313 overlap by 4 nucleotides
Dsui_1309: Dsui_1309 - acetylglutamate kinase, at 1,370,243 to 1,371,124
_1309
Dsui_1310: Dsui_1310 - molecular chaperone (small heat shock protein), at 1,371,222 to 1,371,653
_1310
Dsui_1311: Dsui_1311 - hypothetical protein, at 1,371,739 to 1,372,083
_1311
Dsui_1312: Dsui_1312 - NTP pyrophosphohydrolase, at 1,372,252 to 1,372,719
_1312
Dsui_1313: Dsui_1313 - Barstar, RNAse (barnase) inhibitor, at 1,372,716 to 1,373,162
_1313
Position (kb)
1371
1372
1373 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1371.192 kb on + strand at 1371.220 kb on + strand at 1371.222 kb on - strand at 1371.267 kb on - strand, within Dsui_1310 at 1371.403 kb on + strand, within Dsui_1310 at 1371.413 kb on + strand, within Dsui_1310 at 1371.452 kb on - strand, within Dsui_1310 at 1371.493 kb on + strand, within Dsui_1310 at 1371.619 kb on - strand at 1371.724 kb on - strand at 1371.729 kb on - strand at 1371.751 kb on + strand at 1371.781 kb on - strand, within Dsui_1311 at 1371.800 kb on + strand at 1371.812 kb on - strand, within Dsui_1311 at 1371.824 kb on - strand, within Dsui_1311 at 1371.829 kb on + strand at 1371.980 kb on - strand, within Dsui_1311 at 1372.076 kb on - strand at 1372.206 kb on - strand at 1372.314 kb on + strand at 1372.356 kb on + strand at 1372.356 kb on + strand at 1372.360 kb on - strand, within Dsui_1312 at 1372.402 kb on - strand, within Dsui_1312 at 1372.422 kb on + strand at 1372.489 kb on - strand, within Dsui_1312 at 1372.492 kb on + strand, within Dsui_1312 at 1372.647 kb on + strand, within Dsui_1312 at 1372.649 kb on + strand, within Dsui_1312 at 1372.649 kb on - strand, within Dsui_1312 at 1372.789 kb on - strand, within Dsui_1313 at 1372.824 kb on + strand at 1372.837 kb on - strand, within Dsui_1313 at 1372.837 kb on - strand, within Dsui_1313 at 1372.856 kb on - strand, within Dsui_1313 at 1372.879 kb on + strand at 1372.896 kb on + strand, within Dsui_1313 at 1372.904 kb on - strand, within Dsui_1313 at 1372.904 kb on - strand, within Dsui_1313 at 1372.904 kb on - strand, within Dsui_1313 at 1372.904 kb on - strand, within Dsui_1313 at 1372.909 kb on - strand, within Dsui_1313
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,371,192 + +0.4 1,371,220 + -0.6 1,371,222 - -0.1 1,371,267 - Dsui_1310 0.10 -0.1 1,371,403 + Dsui_1310 0.42 +0.4 1,371,413 + Dsui_1310 0.44 -2.2 1,371,452 - Dsui_1310 0.53 -0.1 1,371,493 + Dsui_1310 0.63 -0.6 1,371,619 - -0.6 1,371,724 - -0.2 1,371,729 - +0.4 1,371,751 + -1.6 1,371,781 - Dsui_1311 0.12 -1.6 1,371,800 + -1.2 1,371,812 - Dsui_1311 0.21 +0.4 1,371,824 - Dsui_1311 0.25 -2.2 1,371,829 + +0.4 1,371,980 - Dsui_1311 0.70 -1.2 1,372,076 - +0.4 1,372,206 - +0.4 1,372,314 + +0.4 1,372,356 + +0.4 1,372,356 + +0.4 1,372,360 - Dsui_1312 0.23 -1.8 1,372,402 - Dsui_1312 0.32 -1.2 1,372,422 + +0.4 1,372,489 - Dsui_1312 0.51 -0.6 1,372,492 + Dsui_1312 0.51 -0.6 1,372,647 + Dsui_1312 0.84 -2.8 1,372,649 + Dsui_1312 0.85 -1.9 1,372,649 - Dsui_1312 0.85 -0.6 1,372,789 - Dsui_1313 0.16 -0.9 1,372,824 + -1.6 1,372,837 - Dsui_1313 0.27 -0.8 1,372,837 - Dsui_1313 0.27 -0.6 1,372,856 - Dsui_1313 0.31 -1.3 1,372,879 + +0.4 1,372,896 + Dsui_1313 0.40 -1.6 1,372,904 - Dsui_1313 0.42 -0.6 1,372,904 - Dsui_1313 0.42 -0.5 1,372,904 - Dsui_1313 0.42 -1.2 1,372,904 - Dsui_1313 0.42 -0.6 1,372,909 - Dsui_1313 0.43 -0.6
Or see this region's nucleotide sequence