Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1297 and Dsui_1298 are separated by 5 nucleotides Dsui_1298 and Dsui_1299 are separated by 69 nucleotides Dsui_1299 and Dsui_1300 are separated by 12 nucleotides
Dsui_1297: Dsui_1297 - biotin synthetase, at 1,360,523 to 1,361,530
_1297
Dsui_1298: Dsui_1298 - methylase involved in ubiquinone/menaquinone biosynthesis, at 1,361,536 to 1,362,438
_1298
Dsui_1299: Dsui_1299 - putative membrane protein, at 1,362,508 to 1,363,209
_1299
Dsui_1300: Dsui_1300 - sulfite oxidase-like oxidoreductase, at 1,363,222 to 1,364,160
_1300
Position (kb)
1361
1362
1363 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1360.918 kb on + strand, within Dsui_1297 at 1361.279 kb on + strand, within Dsui_1297 at 1361.290 kb on + strand, within Dsui_1297 at 1361.355 kb on + strand, within Dsui_1297 at 1362.487 kb on - strand at 1362.597 kb on + strand, within Dsui_1299 at 1362.682 kb on - strand, within Dsui_1299 at 1362.684 kb on + strand at 1362.701 kb on + strand, within Dsui_1299 at 1362.709 kb on - strand, within Dsui_1299 at 1362.720 kb on - strand, within Dsui_1299 at 1362.746 kb on + strand, within Dsui_1299 at 1362.812 kb on + strand, within Dsui_1299 at 1362.904 kb on - strand, within Dsui_1299 at 1362.919 kb on - strand, within Dsui_1299 at 1363.052 kb on + strand, within Dsui_1299 at 1363.061 kb on + strand, within Dsui_1299 at 1363.072 kb on + strand at 1363.080 kb on - strand, within Dsui_1299 at 1363.103 kb on - strand, within Dsui_1299 at 1363.124 kb on + strand, within Dsui_1299 at 1363.137 kb on - strand, within Dsui_1299 at 1363.239 kb on + strand at 1363.239 kb on + strand at 1363.247 kb on - strand at 1363.247 kb on - strand at 1363.287 kb on + strand at 1363.288 kb on + strand at 1363.348 kb on + strand at 1363.418 kb on + strand, within Dsui_1300
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,360,918 + Dsui_1297 0.39 -2.4 1,361,279 + Dsui_1297 0.75 -2.8 1,361,290 + Dsui_1297 0.76 -3.3 1,361,355 + Dsui_1297 0.83 -2.1 1,362,487 - -0.3 1,362,597 + Dsui_1299 0.13 -1.9 1,362,682 - Dsui_1299 0.25 -0.9 1,362,684 + +0.4 1,362,701 + Dsui_1299 0.27 -2.6 1,362,709 - Dsui_1299 0.29 -0.4 1,362,720 - Dsui_1299 0.30 -0.7 1,362,746 + Dsui_1299 0.34 -0.6 1,362,812 + Dsui_1299 0.43 +0.4 1,362,904 - Dsui_1299 0.56 -0.1 1,362,919 - Dsui_1299 0.59 -0.5 1,363,052 + Dsui_1299 0.77 -1.2 1,363,061 + Dsui_1299 0.79 -1.6 1,363,072 + +0.4 1,363,080 - Dsui_1299 0.81 +1.0 1,363,103 - Dsui_1299 0.85 -3.9 1,363,124 + Dsui_1299 0.88 +0.4 1,363,137 - Dsui_1299 0.90 -1.2 1,363,239 + -0.6 1,363,239 + -0.6 1,363,247 - -0.9 1,363,247 - -0.3 1,363,287 + +0.4 1,363,288 + -0.6 1,363,348 + +0.4 1,363,418 + Dsui_1300 0.21 -0.6
Or see this region's nucleotide sequence