Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1017 and Dsui_1018 are separated by 588 nucleotides Dsui_1018 and Dsui_1019 overlap by 30 nucleotides
Dsui_1017: Dsui_1017 - hypothetical protein, at 1,050,402 to 1,050,809
_1017
Dsui_1018: Dsui_1018 - hypothetical protein, at 1,051,398 to 1,051,616
_1018
Dsui_1019: Dsui_1019 - transposase, at 1,051,587 to 1,052,387
_1019
Position (kb)
1050
1051 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1049.434 kb on + strand at 1049.434 kb on - strand at 1049.472 kb on - strand at 1049.499 kb on - strand at 1049.654 kb on + strand at 1049.664 kb on - strand at 1049.674 kb on + strand at 1049.674 kb on + strand at 1049.674 kb on + strand at 1049.674 kb on + strand at 1049.674 kb on + strand at 1049.674 kb on + strand at 1049.674 kb on - strand at 1049.681 kb on + strand at 1049.682 kb on + strand at 1049.682 kb on - strand at 1049.682 kb on - strand at 1049.682 kb on - strand at 1049.702 kb on - strand at 1049.714 kb on - strand at 1049.724 kb on + strand at 1049.737 kb on + strand at 1049.750 kb on + strand at 1049.758 kb on - strand at 1049.763 kb on + strand at 1049.763 kb on + strand at 1049.783 kb on - strand at 1049.808 kb on + strand at 1049.808 kb on + strand at 1049.808 kb on + strand at 1049.809 kb on + strand at 1049.816 kb on - strand at 1049.816 kb on - strand at 1049.816 kb on - strand at 1049.818 kb on + strand at 1049.828 kb on + strand at 1049.894 kb on + strand at 1049.894 kb on + strand at 1049.899 kb on + strand at 1049.907 kb on - strand at 1049.934 kb on + strand at 1049.942 kb on - strand at 1049.958 kb on + strand at 1049.958 kb on + strand at 1049.966 kb on + strand at 1049.974 kb on - strand at 1050.033 kb on - strand at 1050.033 kb on - strand at 1050.046 kb on + strand at 1050.046 kb on + strand at 1050.046 kb on + strand at 1050.046 kb on + strand at 1050.048 kb on + strand at 1050.053 kb on + strand at 1050.054 kb on - strand at 1050.061 kb on - strand at 1050.085 kb on + strand at 1050.091 kb on - strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on + strand at 1050.093 kb on - strand at 1050.099 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.101 kb on - strand at 1050.102 kb on + strand at 1050.108 kb on - strand at 1050.114 kb on + strand at 1050.121 kb on + strand at 1050.123 kb on + strand at 1050.131 kb on - strand at 1050.145 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.183 kb on + strand at 1050.190 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.191 kb on - strand at 1050.210 kb on + strand at 1050.210 kb on + strand at 1050.216 kb on + strand at 1050.225 kb on + strand at 1050.226 kb on + strand at 1050.233 kb on - strand at 1050.234 kb on - strand at 1050.286 kb on + strand at 1050.309 kb on + strand at 1050.311 kb on + strand at 1050.312 kb on - strand at 1050.314 kb on + strand at 1050.317 kb on - strand at 1050.318 kb on + strand at 1050.319 kb on - strand at 1050.326 kb on - strand at 1050.327 kb on - strand at 1050.327 kb on - strand at 1050.327 kb on - strand at 1050.329 kb on - strand at 1050.359 kb on + strand at 1050.365 kb on - strand at 1050.367 kb on - strand at 1050.376 kb on - strand at 1050.376 kb on - strand at 1050.392 kb on - strand at 1050.394 kb on - strand at 1050.394 kb on - strand at 1050.394 kb on - strand at 1050.420 kb on + strand at 1050.428 kb on - strand at 1050.443 kb on + strand, within Dsui_1017 at 1050.475 kb on - strand, within Dsui_1017 at 1050.522 kb on + strand, within Dsui_1017 at 1050.537 kb on + strand, within Dsui_1017 at 1050.568 kb on + strand, within Dsui_1017 at 1050.572 kb on + strand, within Dsui_1017 at 1050.580 kb on - strand, within Dsui_1017 at 1050.613 kb on - strand, within Dsui_1017 at 1050.669 kb on - strand, within Dsui_1017 at 1050.687 kb on + strand, within Dsui_1017 at 1050.694 kb on - strand, within Dsui_1017 at 1050.695 kb on - strand, within Dsui_1017 at 1050.695 kb on - strand, within Dsui_1017 at 1050.697 kb on + strand, within Dsui_1017 at 1050.698 kb on + strand, within Dsui_1017 at 1050.743 kb on - strand, within Dsui_1017 at 1050.821 kb on - strand at 1050.835 kb on - strand at 1050.847 kb on - strand at 1050.863 kb on + strand at 1050.938 kb on + strand at 1050.938 kb on + strand at 1050.943 kb on + strand at 1050.986 kb on + strand at 1051.031 kb on - strand at 1051.031 kb on - strand at 1051.044 kb on + strand at 1051.059 kb on - strand at 1051.139 kb on + strand at 1051.142 kb on + strand at 1051.142 kb on + strand at 1051.142 kb on + strand at 1051.150 kb on - strand at 1051.253 kb on + strand at 1051.253 kb on + strand at 1051.254 kb on - strand at 1051.285 kb on + strand at 1051.293 kb on - strand at 1051.297 kb on - strand at 1051.385 kb on + strand at 1051.454 kb on + strand, within Dsui_1018 at 1051.475 kb on + strand, within Dsui_1018 at 1051.527 kb on - strand, within Dsui_1018 at 1051.535 kb on + strand, within Dsui_1018 at 1051.543 kb on - strand, within Dsui_1018 at 1051.554 kb on - strand, within Dsui_1018 at 1051.554 kb on - strand, within Dsui_1018 at 1051.572 kb on - strand, within Dsui_1018 at 1051.573 kb on - strand, within Dsui_1018 at 1051.573 kb on - strand, within Dsui_1018 at 1051.594 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,049,434 + -0.0 1,049,434 - +0.6 1,049,472 - -1.4 1,049,499 - -0.4 1,049,654 + +0.2 1,049,664 - +0.6 1,049,674 + +1.5 1,049,674 + -0.9 1,049,674 + -0.9 1,049,674 + -2.4 1,049,674 + -1.7 1,049,674 + +0.1 1,049,674 - -0.9 1,049,681 + -2.7 1,049,682 + -0.4 1,049,682 - +0.6 1,049,682 - -0.9 1,049,682 - -0.4 1,049,702 - +0.6 1,049,714 - +0.6 1,049,724 + +1.4 1,049,737 + +0.6 1,049,750 + +0.5 1,049,758 - -0.4 1,049,763 + +0.5 1,049,763 + -0.4 1,049,783 - +0.6 1,049,808 + -0.6 1,049,808 + -2.7 1,049,808 + +0.2 1,049,809 + -1.7 1,049,816 - +0.6 1,049,816 - -0.9 1,049,816 - -0.4 1,049,818 + +0.1 1,049,828 + +0.3 1,049,894 + -1.4 1,049,894 + +0.6 1,049,899 + -1.3 1,049,907 - +0.6 1,049,934 + -0.5 1,049,942 - -0.9 1,049,958 + -1.7 1,049,958 + +0.6 1,049,966 + -0.1 1,049,974 - -1.9 1,050,033 - -2.5 1,050,033 - -0.4 1,050,046 + +0.6 1,050,046 + -0.4 1,050,046 + -0.4 1,050,046 + +0.6 1,050,048 + -1.9 1,050,053 + -0.4 1,050,054 - +0.6 1,050,061 - -0.4 1,050,085 + -1.4 1,050,091 - +0.6 1,050,093 + -1.4 1,050,093 + +0.6 1,050,093 + +0.6 1,050,093 + -1.4 1,050,093 + +0.6 1,050,093 + +0.2 1,050,093 + -1.5 1,050,093 + +0.6 1,050,093 + -0.9 1,050,093 + -0.7 1,050,093 + +2.2 1,050,093 + -0.6 1,050,093 - -2.7 1,050,099 - -0.9 1,050,101 - -0.9 1,050,101 - +0.6 1,050,101 - +0.6 1,050,101 - -0.4 1,050,101 - +0.6 1,050,101 - -0.4 1,050,101 - +0.6 1,050,101 - -2.4 1,050,101 - -2.2 1,050,101 - +0.6 1,050,101 - -0.4 1,050,101 - -0.9 1,050,101 - +0.6 1,050,101 - +0.6 1,050,101 - -0.9 1,050,101 - -0.4 1,050,101 - -1.4 1,050,101 - -1.7 1,050,101 - -3.1 1,050,101 - -0.9 1,050,101 - +0.6 1,050,102 + -0.4 1,050,108 - -1.7 1,050,114 + -0.3 1,050,121 + +0.6 1,050,123 + +0.6 1,050,131 - -0.4 1,050,145 + -1.4 1,050,183 + -0.9 1,050,183 + -2.7 1,050,183 + +0.6 1,050,183 + -1.7 1,050,183 + -1.5 1,050,183 + -0.9 1,050,183 + +0.6 1,050,183 + -2.2 1,050,183 + -1.7 1,050,183 + -0.9 1,050,183 + -0.1 1,050,190 - +0.6 1,050,191 - -0.9 1,050,191 - -0.4 1,050,191 - +0.6 1,050,191 - +0.6 1,050,191 - -0.4 1,050,191 - +0.6 1,050,191 - -1.9 1,050,191 - -1.7 1,050,191 - +0.6 1,050,191 - +0.6 1,050,191 - -0.9 1,050,191 - +0.6 1,050,191 - +0.6 1,050,191 - -0.9 1,050,191 - +0.6 1,050,191 - -0.4 1,050,191 - -0.4 1,050,210 + -0.4 1,050,210 + -1.2 1,050,216 + -0.9 1,050,225 + -1.4 1,050,226 + +0.6 1,050,233 - +0.6 1,050,234 - +0.6 1,050,286 + +0.6 1,050,309 + -0.4 1,050,311 + +0.6 1,050,312 - -0.9 1,050,314 + -0.9 1,050,317 - +0.6 1,050,318 + +0.2 1,050,319 - -2.2 1,050,326 - +0.6 1,050,327 - -1.9 1,050,327 - +0.6 1,050,327 - +0.6 1,050,329 - -2.9 1,050,359 + +0.6 1,050,365 - +0.6 1,050,367 - -0.9 1,050,376 - -1.7 1,050,376 - +0.6 1,050,392 - -0.9 1,050,394 - +0.6 1,050,394 - +0.6 1,050,394 - -0.4 1,050,420 + -0.6 1,050,428 - -0.9 1,050,443 + Dsui_1017 0.10 -1.7 1,050,475 - Dsui_1017 0.18 +0.6 1,050,522 + Dsui_1017 0.29 +0.6 1,050,537 + Dsui_1017 0.33 -0.4 1,050,568 + Dsui_1017 0.41 -0.9 1,050,572 + Dsui_1017 0.42 +0.6 1,050,580 - Dsui_1017 0.44 -0.4 1,050,613 - Dsui_1017 0.52 -0.9 1,050,669 - Dsui_1017 0.65 +0.6 1,050,687 + Dsui_1017 0.70 -0.4 1,050,694 - Dsui_1017 0.72 +0.6 1,050,695 - Dsui_1017 0.72 -1.7 1,050,695 - Dsui_1017 0.72 -1.4 1,050,697 + Dsui_1017 0.72 -2.4 1,050,698 + Dsui_1017 0.73 -0.4 1,050,743 - Dsui_1017 0.84 +0.6 1,050,821 - -3.1 1,050,835 - +0.6 1,050,847 - +0.6 1,050,863 + -0.9 1,050,938 + -0.4 1,050,938 + +2.2 1,050,943 + -0.7 1,050,986 + -0.9 1,051,031 - +0.6 1,051,031 - -0.4 1,051,044 + -2.2 1,051,059 - -1.7 1,051,139 + -0.5 1,051,142 + -1.2 1,051,142 + -0.4 1,051,142 + -0.4 1,051,150 - -1.4 1,051,253 + -1.3 1,051,253 + -0.9 1,051,254 - +0.6 1,051,285 + +0.6 1,051,293 - +0.6 1,051,297 - +0.6 1,051,385 + -0.4 1,051,454 + Dsui_1018 0.26 -0.1 1,051,475 + Dsui_1018 0.35 -0.9 1,051,527 - Dsui_1018 0.59 +0.6 1,051,535 + Dsui_1018 0.63 +0.6 1,051,543 - Dsui_1018 0.66 +0.6 1,051,554 - Dsui_1018 0.71 -3.2 1,051,554 - Dsui_1018 0.71 -0.4 1,051,572 - Dsui_1018 0.79 -0.4 1,051,573 - Dsui_1018 0.80 -0.4 1,051,573 - Dsui_1018 0.80 -0.9 1,051,594 - -1.9
Or see this region's nucleotide sequence