Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0948 and Dsui_0949 are separated by 40 nucleotides Dsui_0949 and Dsui_0950 overlap by 4 nucleotides Dsui_0950 and Dsui_0951 are separated by 169 nucleotides Dsui_0951 and Dsui_0952 are separated by 126 nucleotides Dsui_0952 and Dsui_0953 are separated by 94 nucleotides
Dsui_0948: Dsui_0948 - hypothetical protein, at 975,431 to 975,850
_0948
Dsui_0949: Dsui_0949 - hypothetical protein, at 975,891 to 976,106
_0949
Dsui_0950: Dsui_0950 - acyl dehydratase, at 976,103 to 976,603
_0950
Dsui_0951: Dsui_0951 - nucleoside-diphosphate-sugar epimerase, at 976,773 to 977,732
_0951
Dsui_0952: Dsui_0952 - chemotaxis protein, at 977,859 to 978,482
_0952
Dsui_0953: Dsui_0953 - ADP-ribosyl-(dinitrogen reductase) hydrolase, at 978,577 to 979,500
_0953
Position (kb) 976
977
978 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 975.918 kb on - strand, within Dsui_0949 at 976.147 kb on + strand at 976.398 kb on + strand, within Dsui_0950 at 976.530 kb on - strand, within Dsui_0950 at 976.642 kb on - strand at 976.700 kb on + strand at 976.700 kb on + strand at 976.893 kb on + strand, within Dsui_0951 at 976.893 kb on + strand, within Dsui_0951 at 977.020 kb on - strand, within Dsui_0951 at 977.048 kb on + strand, within Dsui_0951 at 977.399 kb on - strand, within Dsui_0951 at 977.430 kb on + strand, within Dsui_0951 at 977.432 kb on - strand, within Dsui_0951 at 977.568 kb on - strand, within Dsui_0951 at 977.590 kb on + strand, within Dsui_0951 at 977.590 kb on + strand, within Dsui_0951 at 977.598 kb on - strand, within Dsui_0951 at 977.632 kb on - strand, within Dsui_0951 at 977.666 kb on + strand at 977.666 kb on + strand at 977.672 kb on + strand at 977.676 kb on + strand at 977.684 kb on - strand at 977.695 kb on + strand at 977.752 kb on + strand at 977.850 kb on - strand at 977.865 kb on - strand at 977.889 kb on - strand at 977.942 kb on - strand, within Dsui_0952 at 977.962 kb on + strand, within Dsui_0952 at 978.105 kb on + strand, within Dsui_0952 at 978.143 kb on + strand at 978.143 kb on + strand, within Dsui_0952 at 978.151 kb on - strand, within Dsui_0952 at 978.156 kb on - strand, within Dsui_0952 at 978.165 kb on + strand, within Dsui_0952 at 978.172 kb on - strand, within Dsui_0952 at 978.316 kb on + strand at 978.316 kb on + strand at 978.316 kb on + strand, within Dsui_0952 at 978.349 kb on - strand, within Dsui_0952 at 978.419 kb on + strand, within Dsui_0952 at 978.419 kb on + strand at 978.427 kb on - strand at 978.463 kb on - strand at 978.499 kb on - strand at 978.728 kb on - strand, within Dsui_0953
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 975,918 - Dsui_0949 0.12 +0.4 976,147 + -0.4 976,398 + Dsui_0950 0.59 -3.5 976,530 - Dsui_0950 0.85 +0.1 976,642 - +0.6 976,700 + -0.4 976,700 + +0.6 976,893 + Dsui_0951 0.12 -0.0 976,893 + Dsui_0951 0.12 -0.1 977,020 - Dsui_0951 0.26 -1.4 977,048 + Dsui_0951 0.29 -0.0 977,399 - Dsui_0951 0.65 +0.6 977,430 + Dsui_0951 0.68 -0.6 977,432 - Dsui_0951 0.69 +0.6 977,568 - Dsui_0951 0.83 -3.0 977,590 + Dsui_0951 0.85 -0.3 977,590 + Dsui_0951 0.85 -0.5 977,598 - Dsui_0951 0.86 -2.2 977,632 - Dsui_0951 0.89 -0.4 977,666 + -0.6 977,666 + +0.3 977,672 + -1.2 977,676 + -0.3 977,684 - +0.6 977,695 + -0.1 977,752 + -0.8 977,850 - -1.4 977,865 - +0.6 977,889 - -0.4 977,942 - Dsui_0952 0.13 -2.1 977,962 + Dsui_0952 0.17 +0.6 978,105 + Dsui_0952 0.39 -2.0 978,143 + +0.6 978,143 + Dsui_0952 0.46 -0.4 978,151 - Dsui_0952 0.47 -0.4 978,156 - Dsui_0952 0.48 -1.7 978,165 + Dsui_0952 0.49 -0.4 978,172 - Dsui_0952 0.50 -0.4 978,316 + -0.4 978,316 + +0.6 978,316 + Dsui_0952 0.73 -0.4 978,349 - Dsui_0952 0.79 +0.6 978,419 + Dsui_0952 0.90 -0.4 978,419 + +0.6 978,427 - +0.0 978,463 - +0.6 978,499 - +0.6 978,728 - Dsui_0953 0.16 -1.4
Or see this region's nucleotide sequence