Strain Fitness in Dechlorosoma suillum PS around Dsui_0794

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0792 and Dsui_0793 are separated by 22 nucleotidesDsui_0793 and Dsui_0794 are separated by 49 nucleotidesDsui_0794 and Dsui_0795 are separated by 20 nucleotidesDsui_0795 and Dsui_0796 are separated by 76 nucleotidesDsui_0796 and Dsui_0797 are separated by 9 nucleotides Dsui_0792: Dsui_0792 - hypothetical protein, at 799,492 to 799,980 _0792 Dsui_0793: Dsui_0793 - N-acetylmuramoyl-L-alanine amidase, at 800,003 to 800,746 _0793 Dsui_0794: Dsui_0794 - putative protease with the C-terminal PDZ domain, at 800,796 to 802,634 _0794 Dsui_0795: Dsui_0795 - putative enzyme of the cupin superfamily, at 802,655 to 803,020 _0795 Dsui_0796: Dsui_0796 - hypothetical protein, at 803,097 to 803,474 _0796 Dsui_0797: Dsui_0797 - protein of unknown function (DUF1840), at 803,484 to 803,816 _0797 Position (kb) 800 801 802 803Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 799.854 kb on - strand, within Dsui_0792at 799.894 kb on + strand, within Dsui_0792at 799.895 kb on - strand, within Dsui_0792at 799.989 kb on + strandat 800.051 kb on - strandat 800.170 kb on + strand, within Dsui_0793at 800.245 kb on - strand, within Dsui_0793at 800.245 kb on - strand, within Dsui_0793at 800.309 kb on + strand, within Dsui_0793at 800.357 kb on - strand, within Dsui_0793at 800.394 kb on + strand, within Dsui_0793at 800.399 kb on + strand, within Dsui_0793at 800.407 kb on - strand, within Dsui_0793at 800.412 kb on - strand, within Dsui_0793at 800.449 kb on - strand, within Dsui_0793at 800.499 kb on + strand, within Dsui_0793at 800.555 kb on + strand, within Dsui_0793at 800.556 kb on - strand, within Dsui_0793at 800.562 kb on - strand, within Dsui_0793at 800.591 kb on - strand, within Dsui_0793at 800.601 kb on - strand, within Dsui_0793at 800.783 kb on - strandat 800.783 kb on - strandat 800.873 kb on + strandat 800.880 kb on + strandat 800.890 kb on + strandat 800.899 kb on + strandat 800.919 kb on + strandat 800.920 kb on + strandat 800.928 kb on - strandat 800.930 kb on + strandat 800.943 kb on + strandat 800.951 kb on - strandat 800.951 kb on - strandat 800.993 kb on + strand, within Dsui_0794at 801.027 kb on - strand, within Dsui_0794at 801.046 kb on - strand, within Dsui_0794at 801.103 kb on - strand, within Dsui_0794at 801.103 kb on - strand, within Dsui_0794at 801.129 kb on + strand, within Dsui_0794at 801.193 kb on - strand, within Dsui_0794at 801.225 kb on + strand, within Dsui_0794at 801.244 kb on - strandat 801.244 kb on - strand, within Dsui_0794at 801.323 kb on - strand, within Dsui_0794at 801.325 kb on - strand, within Dsui_0794at 801.445 kb on + strand, within Dsui_0794at 801.456 kb on + strand, within Dsui_0794at 801.458 kb on + strand, within Dsui_0794at 801.458 kb on - strandat 801.458 kb on - strand, within Dsui_0794at 801.580 kb on + strandat 801.603 kb on + strand, within Dsui_0794at 801.603 kb on + strand, within Dsui_0794at 801.611 kb on - strand, within Dsui_0794at 801.613 kb on + strand, within Dsui_0794at 801.616 kb on - strand, within Dsui_0794at 801.762 kb on - strand, within Dsui_0794at 801.773 kb on + strandat 801.774 kb on + strand, within Dsui_0794at 801.781 kb on + strand, within Dsui_0794at 801.796 kb on - strand, within Dsui_0794at 801.849 kb on + strand, within Dsui_0794at 801.859 kb on + strand, within Dsui_0794at 801.909 kb on + strand, within Dsui_0794at 801.909 kb on + strand, within Dsui_0794at 801.924 kb on + strand, within Dsui_0794at 801.929 kb on - strand, within Dsui_0794at 802.080 kb on + strand, within Dsui_0794at 802.081 kb on + strand, within Dsui_0794at 802.098 kb on - strandat 802.151 kb on + strand, within Dsui_0794at 802.280 kb on + strand, within Dsui_0794at 802.283 kb on - strand, within Dsui_0794at 802.317 kb on + strandat 802.322 kb on + strand, within Dsui_0794at 802.391 kb on + strand, within Dsui_0794at 802.431 kb on + strandat 802.434 kb on - strand, within Dsui_0794at 802.486 kb on + strandat 802.520 kb on + strandat 802.528 kb on - strandat 802.539 kb on - strandat 802.571 kb on - strandat 802.712 kb on - strand, within Dsui_0795at 802.727 kb on - strand, within Dsui_0795at 802.737 kb on - strand, within Dsui_0795at 802.758 kb on + strand, within Dsui_0795at 802.758 kb on + strand, within Dsui_0795at 802.758 kb on + strand, within Dsui_0795at 802.766 kb on - strand, within Dsui_0795at 802.766 kb on - strand, within Dsui_0795at 802.817 kb on - strandat 802.896 kb on + strand, within Dsui_0795at 802.959 kb on + strand, within Dsui_0795at 802.967 kb on - strand, within Dsui_0795at 803.011 kb on + strandat 803.096 kb on - strandat 803.129 kb on + strandat 803.129 kb on + strandat 803.129 kb on + strandat 803.133 kb on - strandat 803.142 kb on + strand, within Dsui_0796at 803.314 kb on + strand, within Dsui_0796at 803.314 kb on + strand, within Dsui_0796at 803.322 kb on - strand, within Dsui_0796at 803.334 kb on + strand, within Dsui_0796at 803.478 kb on - strandat 803.478 kb on - strandat 803.483 kb on - strandat 803.518 kb on - strandat 803.573 kb on - strand, within Dsui_0797at 803.622 kb on - strand, within Dsui_0797

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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799,854 - Dsui_0792 0.74 +0.6
799,894 + Dsui_0792 0.82 -1.4
799,895 - Dsui_0792 0.82 -3.6
799,989 + +0.6
800,051 - +0.0
800,170 + Dsui_0793 0.22 -1.0
800,245 - Dsui_0793 0.33 -0.4
800,245 - Dsui_0793 0.33 -0.4
800,309 + Dsui_0793 0.41 -0.4
800,357 - Dsui_0793 0.48 -2.4
800,394 + Dsui_0793 0.53 -0.4
800,399 + Dsui_0793 0.53 +0.6
800,407 - Dsui_0793 0.54 -0.6
800,412 - Dsui_0793 0.55 +0.2
800,449 - Dsui_0793 0.60 -0.3
800,499 + Dsui_0793 0.67 -0.4
800,555 + Dsui_0793 0.74 -1.0
800,556 - Dsui_0793 0.74 +0.1
800,562 - Dsui_0793 0.75 +0.6
800,591 - Dsui_0793 0.79 -1.0
800,601 - Dsui_0793 0.80 +0.9
800,783 - +0.6
800,783 - -0.2
800,873 + -0.7
800,880 + -0.3
800,890 + +0.5
800,899 + -0.1
800,919 + -1.2
800,920 + +0.8
800,928 - +0.6
800,930 + -1.1
800,943 + -0.9
800,951 - +0.6
800,951 - -2.2
800,993 + Dsui_0794 0.11 +0.6
801,027 - Dsui_0794 0.13 +0.6
801,046 - Dsui_0794 0.14 -1.0
801,103 - Dsui_0794 0.17 +0.6
801,103 - Dsui_0794 0.17 -0.4
801,129 + Dsui_0794 0.18 -0.0
801,193 - Dsui_0794 0.22 -2.2
801,225 + Dsui_0794 0.23 +0.2
801,244 - -0.4
801,244 - Dsui_0794 0.24 -0.4
801,323 - Dsui_0794 0.29 -2.4
801,325 - Dsui_0794 0.29 -0.4
801,445 + Dsui_0794 0.35 -1.9
801,456 + Dsui_0794 0.36 -1.7
801,458 + Dsui_0794 0.36 -0.6
801,458 - -0.4
801,458 - Dsui_0794 0.36 +0.6
801,580 + -0.0
801,603 + Dsui_0794 0.44 -0.0
801,603 + Dsui_0794 0.44 +0.3
801,611 - Dsui_0794 0.44 +0.6
801,613 + Dsui_0794 0.44 -0.0
801,616 - Dsui_0794 0.45 +0.6
801,762 - Dsui_0794 0.53 -1.4
801,773 + +1.6
801,774 + Dsui_0794 0.53 -1.0
801,781 + Dsui_0794 0.54 -1.2
801,796 - Dsui_0794 0.54 -1.0
801,849 + Dsui_0794 0.57 +0.3
801,859 + Dsui_0794 0.58 -0.4
801,909 + Dsui_0794 0.61 -0.4
801,909 + Dsui_0794 0.61 -1.4
801,924 + Dsui_0794 0.61 -1.3
801,929 - Dsui_0794 0.62 -2.9
802,080 + Dsui_0794 0.70 -0.6
802,081 + Dsui_0794 0.70 -1.7
802,098 - +0.6
802,151 + Dsui_0794 0.74 -2.9
802,280 + Dsui_0794 0.81 +0.1
802,283 - Dsui_0794 0.81 -3.5
802,317 + -1.0
802,322 + Dsui_0794 0.83 -2.2
802,391 + Dsui_0794 0.87 +0.2
802,431 + -0.4
802,434 - Dsui_0794 0.89 -2.9
802,486 + -0.5
802,520 + -2.2
802,528 - -0.4
802,539 - -0.2
802,571 - +0.6
802,712 - Dsui_0795 0.16 +0.6
802,727 - Dsui_0795 0.20 -1.7
802,737 - Dsui_0795 0.22 -0.4
802,758 + Dsui_0795 0.28 -0.6
802,758 + Dsui_0795 0.28 -0.5
802,758 + Dsui_0795 0.28 -1.1
802,766 - Dsui_0795 0.30 -1.7
802,766 - Dsui_0795 0.30 -2.7
802,817 - +0.6
802,896 + Dsui_0795 0.66 +2.2
802,959 + Dsui_0795 0.83 +0.2
802,967 - Dsui_0795 0.85 -0.4
803,011 + -2.3
803,096 - -0.4
803,129 + -0.1
803,129 + -0.3
803,129 + -0.1
803,133 - +0.1
803,142 + Dsui_0796 0.12 +0.2
803,314 + Dsui_0796 0.57 -0.9
803,314 + Dsui_0796 0.57 +0.6
803,322 - Dsui_0796 0.60 -1.0
803,334 + Dsui_0796 0.63 +0.3
803,478 - +0.3
803,478 - +0.3
803,483 - -0.9
803,518 - +1.2
803,573 - Dsui_0797 0.27 +0.2
803,622 - Dsui_0797 0.41 -0.5

Or see this region's nucleotide sequence