Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0763 and Dsui_0764 are separated by 13 nucleotides Dsui_0764 and Dsui_0765 are separated by 60 nucleotides Dsui_0765 and Dsui_0766 are separated by 317 nucleotides
Dsui_0763: Dsui_0763 - ammonium transporter, at 764,379 to 765,779
_0763
Dsui_0764: Dsui_0764 - nitrogen regulatory protein PII, at 765,793 to 766,131
_0764
Dsui_0765: Dsui_0765 - conserved hypothetical protein, proteobacterial, at 766,192 to 766,977
_0765
Dsui_0766: Dsui_0766 - hypothetical protein, at 767,295 to 767,531
_0766
Position (kb) 766
767 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 765.201 kb on + strand, within Dsui_0763 at 765.219 kb on - strand at 765.274 kb on - strand, within Dsui_0763 at 765.324 kb on + strand at 765.362 kb on + strand at 765.393 kb on + strand, within Dsui_0763 at 765.427 kb on - strand, within Dsui_0763 at 765.493 kb on - strand at 765.507 kb on + strand at 765.507 kb on + strand at 765.517 kb on + strand, within Dsui_0763 at 765.517 kb on + strand, within Dsui_0763 at 765.522 kb on + strand, within Dsui_0763 at 765.525 kb on - strand, within Dsui_0763 at 765.525 kb on - strand, within Dsui_0763 at 765.530 kb on - strand, within Dsui_0763 at 765.533 kb on + strand, within Dsui_0763 at 765.541 kb on - strand, within Dsui_0763 at 765.542 kb on - strand at 765.575 kb on + strand at 765.742 kb on + strand at 765.761 kb on - strand at 765.761 kb on - strand at 765.761 kb on - strand at 765.781 kb on + strand at 765.859 kb on + strand at 765.861 kb on - strand at 765.895 kb on + strand, within Dsui_0764 at 765.952 kb on - strand, within Dsui_0764 at 765.994 kb on + strand, within Dsui_0764 at 766.028 kb on + strand, within Dsui_0764 at 766.028 kb on + strand, within Dsui_0764 at 766.036 kb on - strand at 766.044 kb on + strand, within Dsui_0764 at 766.046 kb on + strand, within Dsui_0764 at 766.123 kb on - strand at 766.182 kb on - strand at 766.210 kb on + strand at 766.218 kb on - strand at 766.221 kb on - strand at 766.223 kb on - strand at 766.258 kb on - strand at 766.263 kb on - strand at 766.282 kb on + strand, within Dsui_0765 at 766.285 kb on - strand, within Dsui_0765 at 766.335 kb on - strand, within Dsui_0765 at 766.346 kb on + strand, within Dsui_0765 at 766.369 kb on - strand at 766.369 kb on - strand, within Dsui_0765 at 766.389 kb on - strand, within Dsui_0765 at 766.416 kb on + strand, within Dsui_0765 at 766.426 kb on - strand, within Dsui_0765 at 766.426 kb on - strand, within Dsui_0765 at 766.431 kb on - strand, within Dsui_0765 at 766.452 kb on + strand, within Dsui_0765 at 766.455 kb on - strand at 766.460 kb on - strand, within Dsui_0765 at 766.498 kb on + strand, within Dsui_0765 at 766.524 kb on + strand, within Dsui_0765 at 766.532 kb on - strand, within Dsui_0765 at 766.537 kb on + strand, within Dsui_0765 at 766.544 kb on - strand, within Dsui_0765 at 766.545 kb on - strand, within Dsui_0765 at 766.565 kb on + strand, within Dsui_0765 at 766.573 kb on + strand, within Dsui_0765 at 766.575 kb on + strand, within Dsui_0765 at 766.575 kb on + strand, within Dsui_0765 at 766.589 kb on + strand at 766.594 kb on + strand, within Dsui_0765 at 766.597 kb on - strand, within Dsui_0765 at 766.740 kb on + strand, within Dsui_0765 at 766.757 kb on - strand, within Dsui_0765 at 766.784 kb on - strand, within Dsui_0765 at 766.825 kb on - strand, within Dsui_0765 at 766.841 kb on - strand, within Dsui_0765 at 766.841 kb on - strand, within Dsui_0765 at 766.874 kb on - strand, within Dsui_0765 at 766.912 kb on + strand at 766.930 kb on - strand at 766.941 kb on - strand at 766.947 kb on + strand at 766.947 kb on + strand at 766.965 kb on - strand at 766.986 kb on + strand at 767.012 kb on + strand at 767.020 kb on - strand at 767.033 kb on - strand at 767.082 kb on + strand at 767.090 kb on - strand at 767.090 kb on - strand at 767.090 kb on - strand at 767.091 kb on - strand at 767.115 kb on - strand at 767.149 kb on + strand at 767.149 kb on + strand at 767.152 kb on - strand at 767.157 kb on - strand at 767.251 kb on - strand at 767.278 kb on + strand at 767.286 kb on - strand at 767.302 kb on + strand at 767.413 kb on + strand, within Dsui_0766 at 767.445 kb on + strand, within Dsui_0766 at 767.445 kb on + strand, within Dsui_0766 at 767.450 kb on + strand, within Dsui_0766 at 767.457 kb on + strand, within Dsui_0766 at 767.481 kb on + strand, within Dsui_0766 at 767.517 kb on + strand at 767.591 kb on - strand at 767.606 kb on + strand at 767.614 kb on + strand at 767.772 kb on + strand at 767.818 kb on + strand at 767.820 kb on - strand at 767.826 kb on - strand at 767.832 kb on + strand at 767.932 kb on - strand at 767.953 kb on - strand at 767.953 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 765,201 + Dsui_0763 0.59 +0.6 765,219 - +0.6 765,274 - Dsui_0763 0.64 -0.4 765,324 + -0.4 765,362 + +0.6 765,393 + Dsui_0763 0.72 +0.6 765,427 - Dsui_0763 0.75 +0.6 765,493 - +0.6 765,507 + +0.6 765,507 + +0.6 765,517 + Dsui_0763 0.81 -1.4 765,517 + Dsui_0763 0.81 -0.4 765,522 + Dsui_0763 0.82 +0.6 765,525 - Dsui_0763 0.82 -3.2 765,525 - Dsui_0763 0.82 -1.0 765,530 - Dsui_0763 0.82 -0.4 765,533 + Dsui_0763 0.82 -2.0 765,541 - Dsui_0763 0.83 +0.6 765,542 - +0.6 765,575 + +0.6 765,742 + -1.8 765,761 - -3.1 765,761 - +0.6 765,761 - -1.4 765,781 + -2.0 765,859 + +0.6 765,861 - +0.6 765,895 + Dsui_0764 0.30 -1.8 765,952 - Dsui_0764 0.47 -0.4 765,994 + Dsui_0764 0.59 -1.4 766,028 + Dsui_0764 0.69 +0.6 766,028 + Dsui_0764 0.69 -2.9 766,036 - +0.6 766,044 + Dsui_0764 0.74 +0.6 766,046 + Dsui_0764 0.75 +0.6 766,123 - -2.8 766,182 - -1.0 766,210 + +0.6 766,218 - -1.0 766,221 - -1.0 766,223 - +0.6 766,258 - -1.0 766,263 - +0.6 766,282 + Dsui_0765 0.11 -1.4 766,285 - Dsui_0765 0.12 +0.6 766,335 - Dsui_0765 0.18 -2.6 766,346 + Dsui_0765 0.20 -1.0 766,369 - +0.6 766,369 - Dsui_0765 0.23 -2.0 766,389 - Dsui_0765 0.25 -1.0 766,416 + Dsui_0765 0.28 -1.4 766,426 - Dsui_0765 0.30 -0.4 766,426 - Dsui_0765 0.30 -1.8 766,431 - Dsui_0765 0.30 -3.4 766,452 + Dsui_0765 0.33 -1.0 766,455 - +0.6 766,460 - Dsui_0765 0.34 -2.0 766,498 + Dsui_0765 0.39 -0.4 766,524 + Dsui_0765 0.42 +0.6 766,532 - Dsui_0765 0.43 -0.4 766,537 + Dsui_0765 0.44 +0.6 766,544 - Dsui_0765 0.45 -1.0 766,545 - Dsui_0765 0.45 -1.8 766,565 + Dsui_0765 0.47 -2.6 766,573 + Dsui_0765 0.48 -1.0 766,575 + Dsui_0765 0.49 -2.0 766,575 + Dsui_0765 0.49 -1.8 766,589 + +0.6 766,594 + Dsui_0765 0.51 -0.4 766,597 - Dsui_0765 0.52 -3.2 766,740 + Dsui_0765 0.70 +0.6 766,757 - Dsui_0765 0.72 +0.6 766,784 - Dsui_0765 0.75 -0.4 766,825 - Dsui_0765 0.81 +0.6 766,841 - Dsui_0765 0.83 -1.8 766,841 - Dsui_0765 0.83 +1.6 766,874 - Dsui_0765 0.87 -1.4 766,912 + -1.8 766,930 - -2.8 766,941 - +0.6 766,947 + -1.2 766,947 + -2.2 766,965 - -1.4 766,986 + +0.6 767,012 + +0.6 767,020 - -0.4 767,033 - -2.0 767,082 + +0.6 767,090 - +0.6 767,090 - +0.6 767,090 - -0.4 767,091 - -1.0 767,115 - -1.4 767,149 + -1.8 767,149 + +0.6 767,152 - +0.6 767,157 - +0.6 767,251 - -0.4 767,278 + +0.7 767,286 - -1.4 767,302 + -0.1 767,413 + Dsui_0766 0.50 -0.1 767,445 + Dsui_0766 0.63 +0.3 767,445 + Dsui_0766 0.63 -0.2 767,450 + Dsui_0766 0.65 +0.0 767,457 + Dsui_0766 0.68 -0.2 767,481 + Dsui_0766 0.78 -0.4 767,517 + -0.6 767,591 - +0.6 767,606 + -0.1 767,614 + +0.2 767,772 + +0.2 767,818 + -0.0 767,820 - +0.6 767,826 - +0.6 767,832 + +0.1 767,932 - -2.0 767,953 - -0.4 767,953 - +1.6
Or see this region's nucleotide sequence