Strain Fitness in Dechlorosoma suillum PS around Dsui_0747

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0746 and Dsui_0747 are separated by 94 nucleotidesDsui_0747 and Dsui_0748 are separated by 173 nucleotides Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755 _0746 Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130 _0747 Dsui_0748: Dsui_0748 - ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, at 746,304 to 747,302 _0748 Position (kb) 744 745 746 747Strain fitness (log2 ratio) -3 -2 -1 0 1at 743.863 kb on - strandat 743.955 kb on - strand, within Dsui_0746at 744.017 kb on + strand, within Dsui_0746at 744.104 kb on - strand, within Dsui_0746at 744.137 kb on - strand, within Dsui_0746at 744.152 kb on - strand, within Dsui_0746at 744.165 kb on + strand, within Dsui_0746at 744.192 kb on + strand, within Dsui_0746at 744.245 kb on + strandat 744.325 kb on - strand, within Dsui_0746at 744.350 kb on - strand, within Dsui_0746at 744.358 kb on - strand, within Dsui_0746at 744.403 kb on + strand, within Dsui_0746at 744.436 kb on + strand, within Dsui_0746at 744.438 kb on - strand, within Dsui_0746at 744.455 kb on + strandat 744.459 kb on + strandat 744.471 kb on - strand, within Dsui_0746at 744.545 kb on - strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.654 kb on + strand, within Dsui_0746at 744.712 kb on + strandat 744.712 kb on + strandat 744.712 kb on + strandat 744.717 kb on + strandat 744.720 kb on - strandat 744.722 kb on + strandat 744.722 kb on + strandat 744.803 kb on + strandat 744.829 kb on - strandat 744.840 kb on + strandat 744.955 kb on - strandat 744.999 kb on - strand, within Dsui_0747at 745.019 kb on - strand, within Dsui_0747at 745.143 kb on - strand, within Dsui_0747at 745.178 kb on - strand, within Dsui_0747at 745.189 kb on - strand, within Dsui_0747at 745.607 kb on - strand, within Dsui_0747at 745.614 kb on + strandat 745.683 kb on + strand, within Dsui_0747at 745.701 kb on + strand, within Dsui_0747at 745.709 kb on - strand, within Dsui_0747at 745.976 kb on - strand, within Dsui_0747at 746.091 kb on + strandat 746.301 kb on + strandat 746.301 kb on + strandat 746.301 kb on + strandat 746.309 kb on - strandat 746.309 kb on - strandat 746.309 kb on - strandat 746.309 kb on - strandat 746.358 kb on + strandat 746.493 kb on - strand, within Dsui_0748at 746.557 kb on - strand, within Dsui_0748at 746.593 kb on + strand, within Dsui_0748at 746.614 kb on + strand, within Dsui_0748at 746.667 kb on + strand, within Dsui_0748at 746.710 kb on - strandat 746.710 kb on - strand, within Dsui_0748at 746.710 kb on - strandat 746.754 kb on - strandat 746.783 kb on + strand, within Dsui_0748at 746.862 kb on + strand, within Dsui_0748at 746.919 kb on + strand, within Dsui_0748at 746.940 kb on + strand, within Dsui_0748at 747.108 kb on - strand, within Dsui_0748at 747.110 kb on + strand, within Dsui_0748at 747.110 kb on + strand, within Dsui_0748at 747.127 kb on + strand, within Dsui_0748at 747.127 kb on + strand, within Dsui_0748

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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743,863 - -0.1
743,955 - Dsui_0746 0.16 -0.2
744,017 + Dsui_0746 0.22 -2.6
744,104 - Dsui_0746 0.31 -0.2
744,137 - Dsui_0746 0.35 -0.0
744,152 - Dsui_0746 0.36 -0.1
744,165 + Dsui_0746 0.38 -0.4
744,192 + Dsui_0746 0.41 +0.6
744,245 + -0.4
744,325 - Dsui_0746 0.55 +0.3
744,350 - Dsui_0746 0.57 +0.1
744,358 - Dsui_0746 0.58 +0.1
744,403 + Dsui_0746 0.63 -1.0
744,436 + Dsui_0746 0.66 -1.0
744,438 - Dsui_0746 0.66 +0.1
744,455 + +0.6
744,459 + +0.6
744,471 - Dsui_0746 0.70 +0.3
744,545 - Dsui_0746 0.78 -0.2
744,626 + Dsui_0746 0.86 -0.4
744,626 + Dsui_0746 0.86 -0.4
744,654 + Dsui_0746 0.89 +0.6
744,712 + -2.3
744,712 + +0.6
744,712 + -0.4
744,717 + -1.8
744,720 - -0.1
744,722 + -2.3
744,722 + -0.4
744,803 + +0.6
744,829 - -0.1
744,840 + +0.6
744,955 - -1.0
744,999 - Dsui_0747 0.12 -0.1
745,019 - Dsui_0747 0.13 -1.5
745,143 - Dsui_0747 0.23 -2.3
745,178 - Dsui_0747 0.26 -2.5
745,189 - Dsui_0747 0.26 -2.8
745,607 - Dsui_0747 0.59 -1.6
745,614 + -0.4
745,683 + Dsui_0747 0.65 -2.4
745,701 + Dsui_0747 0.66 -1.0
745,709 - Dsui_0747 0.67 -2.0
745,976 - Dsui_0747 0.88 -2.2
746,091 + +0.6
746,301 + -0.0
746,301 + +0.3
746,301 + +0.4
746,309 - +0.6
746,309 - +0.6
746,309 - +0.6
746,309 - -0.4
746,358 + -0.3
746,493 - Dsui_0748 0.19 +0.6
746,557 - Dsui_0748 0.25 +0.6
746,593 + Dsui_0748 0.29 -0.1
746,614 + Dsui_0748 0.31 -0.0
746,667 + Dsui_0748 0.36 -0.4
746,710 - +0.6
746,710 - Dsui_0748 0.41 +0.6
746,710 - -0.4
746,754 - +0.6
746,783 + Dsui_0748 0.48 -0.1
746,862 + Dsui_0748 0.56 -0.0
746,919 + Dsui_0748 0.62 -0.1
746,940 + Dsui_0748 0.64 -0.4
747,108 - Dsui_0748 0.80 -1.0
747,110 + Dsui_0748 0.81 -1.4
747,110 + Dsui_0748 0.81 -0.3
747,127 + Dsui_0748 0.82 -0.2
747,127 + Dsui_0748 0.82 +1.4

Or see this region's nucleotide sequence