Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0115 and Dsui_0116 are separated by 116 nucleotides Dsui_0116 and Dsui_0117 are separated by 42 nucleotides Dsui_0117 and Dsui_0118 are separated by 153 nucleotides Dsui_0118 and Dsui_0119 are separated by 31 nucleotides
Dsui_0115: Dsui_0115 - hypothetical protein, at 113,954 to 114,448
_0115
Dsui_0116: Dsui_0116 - alkylhydroperoxidase AhpD family core domain protein, at 114,565 to 114,924
_0116
Dsui_0117: Dsui_0117 - methyl-accepting chemotaxis protein, at 114,967 to 116,610
_0117
Dsui_0118: Dsui_0118 - monothiol glutaredoxin, Grx4 family, at 116,764 to 117,084
_0118
Dsui_0119: Dsui_0119 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 117,116 to 117,961
_0119
Position (kb)
114
115
116
117 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 113.985 kb on - strand at 113.999 kb on + strand at 114.006 kb on - strand, within Dsui_0115 at 114.030 kb on - strand, within Dsui_0115 at 114.051 kb on - strand, within Dsui_0115 at 114.062 kb on + strand, within Dsui_0115 at 114.121 kb on + strand, within Dsui_0115 at 114.185 kb on - strand, within Dsui_0115 at 114.206 kb on - strand, within Dsui_0115 at 114.285 kb on + strand, within Dsui_0115 at 114.293 kb on - strand, within Dsui_0115 at 114.331 kb on - strand, within Dsui_0115 at 114.421 kb on + strand at 114.444 kb on - strand at 114.496 kb on - strand at 114.499 kb on + strand at 114.514 kb on + strand at 114.562 kb on + strand at 114.615 kb on - strand at 114.621 kb on + strand at 114.775 kb on + strand, within Dsui_0116 at 114.775 kb on + strand, within Dsui_0116 at 114.826 kb on - strand, within Dsui_0116 at 114.853 kb on + strand, within Dsui_0116 at 114.866 kb on - strand at 114.885 kb on - strand, within Dsui_0116 at 114.889 kb on - strand at 114.900 kb on - strand at 115.004 kb on + strand at 115.012 kb on - strand at 115.016 kb on + strand at 115.024 kb on - strand at 115.086 kb on + strand at 115.142 kb on - strand, within Dsui_0117 at 115.185 kb on + strand, within Dsui_0117 at 115.256 kb on - strand, within Dsui_0117 at 115.369 kb on - strand, within Dsui_0117 at 115.411 kb on + strand, within Dsui_0117 at 115.419 kb on - strand, within Dsui_0117 at 115.463 kb on + strand, within Dsui_0117 at 115.601 kb on - strand, within Dsui_0117 at 115.728 kb on + strand at 115.738 kb on + strand at 115.738 kb on + strand, within Dsui_0117 at 115.738 kb on + strand, within Dsui_0117 at 115.741 kb on - strand at 115.766 kb on + strand, within Dsui_0117 at 115.783 kb on + strand, within Dsui_0117 at 115.789 kb on + strand, within Dsui_0117 at 115.794 kb on + strand, within Dsui_0117 at 115.804 kb on + strand, within Dsui_0117 at 115.812 kb on - strand, within Dsui_0117 at 115.829 kb on - strand, within Dsui_0117 at 115.835 kb on + strand, within Dsui_0117 at 115.874 kb on + strand, within Dsui_0117 at 115.904 kb on + strand, within Dsui_0117 at 115.904 kb on + strand, within Dsui_0117 at 115.911 kb on + strand, within Dsui_0117 at 115.940 kb on + strand, within Dsui_0117 at 115.982 kb on - strand, within Dsui_0117 at 116.043 kb on + strand, within Dsui_0117 at 116.125 kb on + strand at 116.127 kb on + strand at 116.137 kb on - strand, within Dsui_0117 at 116.146 kb on + strand, within Dsui_0117 at 116.207 kb on + strand, within Dsui_0117 at 116.256 kb on - strand, within Dsui_0117 at 116.281 kb on - strand, within Dsui_0117 at 116.290 kb on - strand, within Dsui_0117 at 116.329 kb on - strand, within Dsui_0117 at 116.331 kb on + strand, within Dsui_0117 at 116.339 kb on - strand, within Dsui_0117 at 116.379 kb on + strand, within Dsui_0117 at 116.379 kb on + strand, within Dsui_0117 at 116.379 kb on + strand, within Dsui_0117 at 116.387 kb on - strand, within Dsui_0117 at 116.387 kb on - strand, within Dsui_0117 at 116.509 kb on + strand at 116.509 kb on + strand at 116.592 kb on + strand at 116.592 kb on + strand at 116.759 kb on - strand at 116.759 kb on - strand at 116.762 kb on + strand at 116.762 kb on + strand at 116.769 kb on - strand at 116.775 kb on - strand at 116.870 kb on + strand, within Dsui_0118 at 116.922 kb on - strand, within Dsui_0118 at 116.939 kb on + strand, within Dsui_0118 at 116.957 kb on - strand, within Dsui_0118 at 116.970 kb on - strand, within Dsui_0118 at 116.974 kb on - strand, within Dsui_0118 at 117.036 kb on - strand, within Dsui_0118 at 117.069 kb on + strand at 117.094 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 113,985 - -0.9 113,999 + -1.2 114,006 - Dsui_0115 0.11 -0.5 114,030 - Dsui_0115 0.15 +0.4 114,051 - Dsui_0115 0.20 -0.8 114,062 + Dsui_0115 0.22 -2.2 114,121 + Dsui_0115 0.34 -2.2 114,185 - Dsui_0115 0.47 -0.2 114,206 - Dsui_0115 0.51 -0.2 114,285 + Dsui_0115 0.67 -1.9 114,293 - Dsui_0115 0.68 -0.5 114,331 - Dsui_0115 0.76 -0.3 114,421 + +0.4 114,444 - -0.6 114,496 - -0.6 114,499 + -0.6 114,514 + +0.4 114,562 + -0.6 114,615 - +0.4 114,621 + +0.4 114,775 + Dsui_0116 0.58 -0.6 114,775 + Dsui_0116 0.58 -1.2 114,826 - Dsui_0116 0.72 -2.4 114,853 + Dsui_0116 0.80 -1.6 114,866 - -1.2 114,885 - Dsui_0116 0.89 -1.6 114,889 - -1.2 114,900 - -0.6 115,004 + +0.4 115,012 - -2.2 115,016 + -1.2 115,024 - -0.6 115,086 + +0.4 115,142 - Dsui_0117 0.11 -3.2 115,185 + Dsui_0117 0.13 +1.0 115,256 - Dsui_0117 0.18 +0.4 115,369 - Dsui_0117 0.24 +0.4 115,411 + Dsui_0117 0.27 -0.6 115,419 - Dsui_0117 0.27 -2.2 115,463 + Dsui_0117 0.30 -1.2 115,601 - Dsui_0117 0.39 -0.6 115,728 + +0.4 115,738 + +0.4 115,738 + Dsui_0117 0.47 +0.4 115,738 + Dsui_0117 0.47 +0.4 115,741 - +0.4 115,766 + Dsui_0117 0.49 -0.6 115,783 + Dsui_0117 0.50 -1.2 115,789 + Dsui_0117 0.50 -0.6 115,794 + Dsui_0117 0.50 -1.9 115,804 + Dsui_0117 0.51 +0.4 115,812 - Dsui_0117 0.51 +0.4 115,829 - Dsui_0117 0.52 -1.2 115,835 + Dsui_0117 0.53 +0.4 115,874 + Dsui_0117 0.55 -0.6 115,904 + Dsui_0117 0.57 -0.6 115,904 + Dsui_0117 0.57 +0.4 115,911 + Dsui_0117 0.57 -1.2 115,940 + Dsui_0117 0.59 -3.0 115,982 - Dsui_0117 0.62 -1.6 116,043 + Dsui_0117 0.65 +0.4 116,125 + +0.4 116,127 + +0.4 116,137 - Dsui_0117 0.71 +0.4 116,146 + Dsui_0117 0.72 -1.2 116,207 + Dsui_0117 0.75 -1.6 116,256 - Dsui_0117 0.78 -1.5 116,281 - Dsui_0117 0.80 -0.5 116,290 - Dsui_0117 0.80 -0.7 116,329 - Dsui_0117 0.83 -1.4 116,331 + Dsui_0117 0.83 +0.4 116,339 - Dsui_0117 0.83 +1.4 116,379 + Dsui_0117 0.86 -0.6 116,379 + Dsui_0117 0.86 -0.6 116,379 + Dsui_0117 0.86 +0.4 116,387 - Dsui_0117 0.86 -0.4 116,387 - Dsui_0117 0.86 -2.4 116,509 + -2.9 116,509 + -2.9 116,592 + +0.4 116,592 + +0.4 116,759 - -0.2 116,759 - +0.0 116,762 + -0.6 116,762 + +0.4 116,769 - -0.2 116,775 - -0.2 116,870 + Dsui_0118 0.33 -1.2 116,922 - Dsui_0118 0.49 -0.4 116,939 + Dsui_0118 0.55 -0.6 116,957 - Dsui_0118 0.60 -0.1 116,970 - Dsui_0118 0.64 -0.1 116,974 - Dsui_0118 0.65 -0.3 117,036 - Dsui_0118 0.85 +0.1 117,069 + +0.4 117,094 - +0.1
Or see this region's nucleotide sequence