Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03813

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,975,638	+				+1.1
3,975,643	-				-3.2
3,975,740	-				-0.4
3,975,744	+				+0.3
3,975,744	+				+0.5
3,975,744	+				+0.5
3,975,790	+				+0.3
3,975,802	+				-0.3
3,975,841	-				-0.1
3,975,879	-				-1.8
3,975,879	-				-1.2
3,975,904	-				-0.1
3,975,937	+				-1.9
3,976,000	+		CCNA_03812	0.16	-0.2
3,976,013	+		CCNA_03812	0.18	+1.0
3,976,013	+		CCNA_03812	0.18	-0.3
3,976,092	+		CCNA_03812	0.33	+0.0
3,976,100	-		CCNA_03812	0.34	-0.4
3,976,105	-		CCNA_03812	0.35	-0.4
3,976,183	+		CCNA_03812	0.49	-0.3
3,976,183	+		CCNA_03812	0.49	-0.4
3,976,205	+		CCNA_03812	0.53	+0.5
3,976,205	+		CCNA_03812	0.53	-1.2
3,976,205	+		CCNA_03812	0.53	-2.1
3,976,213	-		CCNA_03812	0.55	+0.8
3,976,213	-		CCNA_03812	0.55	+0.5
3,976,213	-		CCNA_03812	0.55	-0.7
3,976,263	+		CCNA_03812	0.64	+0.0
3,976,263	+		CCNA_03812	0.64	-0.2
3,976,263	+		CCNA_03812	0.64	-1.0
3,976,263	+				+0.5
3,976,263	+		CCNA_03812	0.64	-1.8
3,976,268	+		CCNA_03812	0.65	-0.8
3,976,271	-		CCNA_03812	0.65	-0.7
3,976,271	-		CCNA_03812	0.65	-0.0
3,976,271	-		CCNA_03812	0.65	-2.9
3,976,271	-		CCNA_03812	0.65	+0.6
3,976,271	-		CCNA_03812	0.65	+0.1
3,976,271	-		CCNA_03812	0.65	-0.6
3,976,271	-		CCNA_03812	0.65	-2.3
3,976,271	-		CCNA_03812	0.65	-1.0
3,976,337	-		CCNA_03812	0.77	-1.1
3,976,362	+		CCNA_03812	0.82	+0.3
3,976,376	+		CCNA_03812	0.84	-3.0
3,976,393	+		CCNA_03812	0.87	-0.7
3,976,416	-				-1.6
3,976,435	+				+0.1
3,976,456	+				-1.6
3,976,464	-				-1.2
3,976,464	-				+1.1
3,976,464	-				+0.2
3,976,469	-				+2.1
3,976,474	-				-0.8
3,976,509	-				-1.3
3,976,566	-				+2.4
3,976,598	+				+1.3
3,976,599	+				+2.2
3,976,603	+				+2.5
3,976,606	-				+1.5
3,976,606	-				+0.6
3,976,613	+				+0.9
3,976,679	-				+1.9
3,976,701	+				+2.1
3,976,701	+				+1.8
3,976,725	-				+1.1
3,976,746	+				+1.4
3,976,755	-		CCNA_03813	0.10	+0.3
3,976,756	+		CCNA_03813	0.10	+2.0
3,976,761	+		CCNA_03813	0.11	+2.5
3,976,769	-		CCNA_03813	0.11	+0.6
3,976,774	-		CCNA_03813	0.12	+1.1
3,976,774	-		CCNA_03813	0.12	+1.1
3,976,796	-		CCNA_03813	0.13	+2.6
3,976,796	-		CCNA_03813	0.13	+2.1
3,976,887	+		CCNA_03813	0.20	+3.5
3,976,895	-		CCNA_03813	0.20	+0.4
3,976,919	+				+0.5
3,976,926	-		CCNA_03813	0.23	+1.9
3,976,931	-		CCNA_03813	0.23	-0.7
3,977,002	-		CCNA_03813	0.28	-0.1
3,977,052	+		CCNA_03813	0.32	+2.5
3,977,057	+		CCNA_03813	0.32	+2.6
3,977,060	-		CCNA_03813	0.32	+1.2
3,977,090	-		CCNA_03813	0.35	+2.4
3,977,145	+		CCNA_03813	0.39	+2.4
3,977,147	+		CCNA_03813	0.39	+2.6
3,977,214	-		CCNA_03813	0.44	+1.6
3,977,221	+		CCNA_03813	0.44	+2.5
3,977,221	+		CCNA_03813	0.44	+2.5
3,977,226	+		CCNA_03813	0.44	+2.0
3,977,229	-		CCNA_03813	0.45	+1.5
3,977,229	-		CCNA_03813	0.45	+0.2
3,977,234	-		CCNA_03813	0.45	+0.8
3,977,234	-		CCNA_03813	0.45	+0.3
3,977,234	-		CCNA_03813	0.45	+0.2
3,977,275	+		CCNA_03813	0.48	+1.7
3,977,285	+		CCNA_03813	0.49	+2.5
3,977,285	+		CCNA_03813	0.49	+2.4
3,977,293	-		CCNA_03813	0.49	+0.6
3,977,293	-		CCNA_03813	0.49	+0.5
3,977,293	-		CCNA_03813	0.49	+0.9
3,977,342	-		CCNA_03813	0.53	+2.8
3,977,363	-		CCNA_03813	0.54	+0.1
3,977,438	-		CCNA_03813	0.60	-1.1
3,977,464	-		CCNA_03813	0.62	-2.1
3,977,469	-		CCNA_03813	0.62	+0.3
3,977,472	+		CCNA_03813	0.62	+2.5
3,977,472	+		CCNA_03813	0.62	+2.4
3,977,544	+		CCNA_03813	0.68	+2.1
3,977,544	+		CCNA_03813	0.68	+2.6
3,977,552	-		CCNA_03813	0.68	-0.1
3,977,552	-		CCNA_03813	0.68	+1.3
3,977,556	+		CCNA_03813	0.68	+2.4
3,977,659	+		CCNA_03813	0.76	+2.1
3,977,676	-		CCNA_03813	0.77	+0.7
3,977,705	+		CCNA_03813	0.79	+2.2
3,977,715	+		CCNA_03813	0.80	+2.5
3,977,795	-		CCNA_03813	0.86	+1.9
3,977,900	-				+1.3
3,977,900	-				+0.8
3,977,932	+				+2.0
3,977,989	+				+1.3
3,977,990	+				+1.7
3,977,990	+				+1.3
3,977,990	+				+1.2
3,977,997	-				-2.2
3,977,998	-				+0.9
3,978,031	+				+1.1
3,978,062	-				-0.1
3,978,067	+				-1.1
3,978,076	+				+1.1
3,978,090	+				-1.2
3,978,097	+				-1.3
3,978,097	+				+0.3
3,978,098	-				-0.1
3,978,098	-				-0.2
3,978,106	-				+0.2
3,978,112	+				-0.8
3,978,112	+				+0.1
3,978,112	+				-0.7
3,978,120	-				+0.5
3,978,130	-		CCNA_03814	0.11	+0.5
3,978,155	+		CCNA_03814	0.16	+0.7
3,978,155	+		CCNA_03814	0.16	-0.8
3,978,163	-		CCNA_03814	0.18	+0.4
3,978,176	+		CCNA_03814	0.20	+0.6
3,978,203	-		CCNA_03814	0.25	+1.0
3,978,217	-		CCNA_03814	0.28	+0.4
3,978,260	+		CCNA_03814	0.36	-0.7
3,978,260	+		CCNA_03814	0.36	+0.0
3,978,269	-		CCNA_03814	0.38	-0.6
3,978,286	+		CCNA_03814	0.41	-0.3
3,978,301	+		CCNA_03814	0.44	-0.4
3,978,319	+		CCNA_03814	0.48	-1.2
3,978,319	-		CCNA_03814	0.48	+0.3
3,978,319	-		CCNA_03814	0.48	-0.1
3,978,327	-		CCNA_03814	0.49	+0.5
3,978,332	-		CCNA_03814	0.50	+1.0
3,978,387	+		CCNA_03814	0.61	-0.1
3,978,398	+		CCNA_03814	0.63	+0.0
3,978,404	+		CCNA_03814	0.64	-1.3
3,978,407	-		CCNA_03814	0.65	-0.0
3,978,409	+		CCNA_03814	0.65	+0.6
3,978,409	+		CCNA_03814	0.65	-0.1
3,978,409	+		CCNA_03814	0.65	-2.2
3,978,409	+		CCNA_03814	0.65	-0.2
3,978,417	-		CCNA_03814	0.66	-0.1
3,978,417	-		CCNA_03814	0.66	+1.0
3,978,417	-		CCNA_03814	0.66	+1.3
3,978,417	-		CCNA_03814	0.66	+0.7
3,978,417	-		CCNA_03814	0.66	-0.3
3,978,417	-		CCNA_03814	0.66	+0.8
3,978,461	+		CCNA_03814	0.75	+0.1
3,978,469	-		CCNA_03814	0.76	+0.4
3,978,469	-		CCNA_03814	0.76	+0.3
3,978,498	+		CCNA_03814	0.82	-0.0
3,978,506	-		CCNA_03814	0.84	+0.5
3,978,506	-		CCNA_03814	0.84	+0.5
3,978,506	-		CCNA_03814	0.84	-0.4
3,978,527	+		CCNA_03814	0.88	+0.3
3,978,620	-				+0.8
3,978,622	+				-2.0
3,978,630	-				-0.4
3,978,647	-				+1.1
3,978,659	-				+0.1
3,978,679	+				+0.9
3,978,696	+				-0.5
3,978,704	-				+0.3
3,978,734	-				+0.3
3,978,790	+		CCNA_03815	0.14	-0.2
3,978,797	-		CCNA_03815	0.15	+0.9
3,978,797	-		CCNA_03815	0.15	+0.6
3,978,798	-		CCNA_03815	0.15	+0.5
3,978,798	-		CCNA_03815	0.15	+0.2
3,978,846	+		CCNA_03815	0.20	-0.6
3,978,927	-		CCNA_03815	0.28	+1.5
3,978,958	-		CCNA_03815	0.32	+0.1
3,978,959	-		CCNA_03815	0.32	+1.0
3,978,970	+		CCNA_03815	0.33	+0.4
3,978,978	-		CCNA_03815	0.34	+0.7
3,978,978	-		CCNA_03815	0.34	+0.7
3,978,978	-		CCNA_03815	0.34	+0.7
3,978,988	+		CCNA_03815	0.35	-2.6