Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03806

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,970,166	-		CCNA_03804	0.63	+1.1
3,970,167	+		CCNA_03804	0.64	-1.8
3,970,172	+		CCNA_03804	0.65	+0.9
3,970,172	+		CCNA_03804	0.65	+0.7
3,970,172	+		CCNA_03804	0.65	+0.6
3,970,180	-		CCNA_03804	0.68	-0.7
3,970,180	-		CCNA_03804	0.68	-1.9
3,970,180	-		CCNA_03804	0.68	-0.7
3,970,191	+		CCNA_03804	0.71	-2.2
3,970,208	+		CCNA_03804	0.76	-1.5
3,970,254	+				-0.4
3,970,254	+				+0.5
3,970,254	+				-0.2
3,970,294	-				-3.2
3,970,321	-		CCNA_03805	0.11	-1.0
3,970,328	-		CCNA_03805	0.12	+0.6
3,970,328	-		CCNA_03805	0.12	-1.8
3,970,367	-		CCNA_03805	0.19	-0.4
3,970,367	-		CCNA_03805	0.19	-0.7
3,970,369	-		CCNA_03805	0.20	-2.0
3,970,388	-		CCNA_03805	0.23	-1.5
3,970,417	-		CCNA_03805	0.28	-4.2
3,970,417	-		CCNA_03805	0.28	-2.2
3,970,417	-		CCNA_03805	0.28	-3.3
3,970,439	-		CCNA_03805	0.32	-0.8
3,970,441	-		CCNA_03805	0.32	-4.4
3,970,464	-		CCNA_03805	0.36	-1.2
3,970,483	-		CCNA_03805	0.39	-2.5
3,970,505	-		CCNA_03805	0.43	-1.6
3,970,505	-		CCNA_03805	0.43	-2.1
3,970,544	-		CCNA_03805	0.50	+0.4
3,970,544	-		CCNA_03805	0.50	-2.0
3,970,567	-		CCNA_03805	0.54	-4.8
3,970,572	-		CCNA_03805	0.55	-0.3
3,970,572	-		CCNA_03805	0.55	-0.1
3,970,631	-		CCNA_03805	0.65	+0.0
3,970,690	-		CCNA_03805	0.75	-0.4
3,970,690	-		CCNA_03805	0.75	-0.7
3,970,737	+		CCNA_03805	0.83	-0.7
3,970,745	-		CCNA_03805	0.84	-0.0
3,970,947	+				+0.0
3,970,989	+				-0.2
3,970,989	-				-0.6
3,970,990	+				-0.4
3,971,019	+				+0.2
3,971,044	-				-0.1
3,971,080	+				+0.3
3,971,085	+				+0.1
3,971,104	+				+0.8
3,971,104	+				+0.6
3,971,104	+				+1.0
3,971,211	-				+1.4
3,971,280	-		CCNA_03806	0.16	+0.1
3,971,288	+		CCNA_03806	0.17	+1.3
3,971,304	-		CCNA_03806	0.19	+1.8
3,971,366	+		CCNA_03806	0.26	+0.9
3,971,366	+		CCNA_03806	0.26	+1.2
3,971,366	+		CCNA_03806	0.26	+1.2
3,971,366	+		CCNA_03806	0.26	+1.1
3,971,366	+		CCNA_03806	0.26	+1.2
3,971,366	+		CCNA_03806	0.26	+1.0
3,971,366	+		CCNA_03806	0.26	+1.5
3,971,374	-		CCNA_03806	0.27	+0.4
3,971,374	-		CCNA_03806	0.27	+0.3
3,971,374	-		CCNA_03806	0.27	-1.1
3,971,374	-		CCNA_03806	0.27	+1.2
3,971,374	-		CCNA_03806	0.27	+0.2
3,971,374	-		CCNA_03806	0.27	+0.9
3,971,374	-		CCNA_03806	0.27	+0.0
3,971,374	-		CCNA_03806	0.27	+0.6
3,971,374	-		CCNA_03806	0.27	-0.2
3,971,379	-		CCNA_03806	0.28	+2.1
3,971,379	-		CCNA_03806	0.28	-0.2
3,971,379	-		CCNA_03806	0.28	+0.1
3,971,404	-		CCNA_03806	0.31	+0.9
3,971,409	-		CCNA_03806	0.31	+0.1
3,971,495	+		CCNA_03806	0.41	+1.1
3,971,503	-		CCNA_03806	0.42	-0.1
3,971,542	+		CCNA_03806	0.47	+1.0
3,971,555	-		CCNA_03806	0.48	-0.1
3,971,575	-		CCNA_03806	0.51	-0.6
3,971,585	+		CCNA_03806	0.52	+1.5
3,971,627	+		CCNA_03806	0.57	+1.1
3,971,657	+		CCNA_03806	0.60	+0.6
3,971,657	+		CCNA_03806	0.60	+0.9
3,971,657	+		CCNA_03806	0.60	+1.1
3,971,658	-		CCNA_03806	0.60	+1.1
3,971,672	+		CCNA_03806	0.62	+1.2
3,971,677	+		CCNA_03806	0.63	+1.0
3,971,685	+		CCNA_03806	0.64	+0.9
3,971,685	+		CCNA_03806	0.64	+1.4
3,971,693	-		CCNA_03806	0.64	+0.2
3,971,693	-		CCNA_03806	0.64	+0.9
3,971,787	-		CCNA_03806	0.75	-1.4
3,971,790	+		CCNA_03806	0.76	+2.0
3,971,837	+		CCNA_03806	0.81	+1.3
3,971,837	+		CCNA_03806	0.81	+1.7
3,971,837	+		CCNA_03806	0.81	+1.4
3,971,845	-		CCNA_03806	0.82	+1.1
3,971,845	-		CCNA_03806	0.82	+0.6
3,971,845	-		CCNA_03806	0.82	-0.7
3,971,850	+		CCNA_03806	0.83	+0.5
3,971,850	+		CCNA_03806	0.83	+0.6
3,971,890	+		CCNA_03806	0.87	+1.2
3,971,897	-		CCNA_03806	0.88	-0.5
3,971,986	+				+0.7
3,971,999	-				-1.4
3,972,000	-				-1.2
3,972,001	-				-2.7
3,972,058	+				+1.2
3,972,058	+				+1.1
3,972,059	-				+0.6
3,972,095	+		CCNA_03807	0.15	+0.9
3,972,103	-		CCNA_03807	0.16	-3.0
3,972,103	-		CCNA_03807	0.16	+1.5
3,972,105	+		CCNA_03807	0.17	+1.1
3,972,106	+		CCNA_03807	0.17	+1.6
3,972,106	+		CCNA_03807	0.17	+1.7
3,972,133	+		CCNA_03807	0.21	+1.0
3,972,150	+		CCNA_03807	0.23	+2.2
3,972,150	+		CCNA_03807	0.23	+1.5
3,972,150	+		CCNA_03807	0.23	+1.3
3,972,150	+		CCNA_03807	0.23	+1.0
3,972,150	+		CCNA_03807	0.23	+0.3
3,972,150	+		CCNA_03807	0.23	+1.5
3,972,150	+		CCNA_03807	0.23	+0.6
3,972,150	+		CCNA_03807	0.23	+1.3
3,972,210	-		CCNA_03807	0.32	-1.2
3,972,299	+		CCNA_03807	0.46	+1.2
3,972,307	-		CCNA_03807	0.47	-0.0
3,972,307	-		CCNA_03807	0.47	-0.0
3,972,338	-		CCNA_03807	0.52	-0.9
3,972,396	-		CCNA_03807	0.60	+1.1
3,972,398	-		CCNA_03807	0.61	-0.9
3,972,460	+		CCNA_03807	0.70	+0.5
3,972,465	+		CCNA_03807	0.71	+1.1
3,972,475	+		CCNA_03807	0.72	+0.9
3,972,483	-		CCNA_03807	0.74	+0.7
3,972,490	+		CCNA_03807	0.75	+0.7
3,972,493	+		CCNA_03807	0.75	+1.2
3,972,493	+		CCNA_03807	0.75	+1.1
3,972,493	+		CCNA_03807	0.75	+1.2
3,972,493	+		CCNA_03807	0.75	+1.3
3,972,493	+		CCNA_03807	0.75	+1.4
3,972,493	+		CCNA_03807	0.75	+1.5
3,972,493	+		CCNA_03807	0.75	+1.4
3,972,493	-		CCNA_03807	0.75	+0.4
3,972,501	-		CCNA_03807	0.76	-0.1
3,972,501	-		CCNA_03807	0.76	-0.7
3,972,520	-		CCNA_03807	0.79	+0.3
3,972,542	-		CCNA_03807	0.83	-1.5
3,972,542	-		CCNA_03807	0.83	+0.1
3,972,542	-		CCNA_03807	0.83	-0.3
3,972,552	+		CCNA_03807	0.84	+1.1
3,972,662	+				+1.0
3,972,662	+				+0.2
3,972,684	+				+0.5
3,972,753	+		CCNA_03808	0.13	+1.0
3,972,753	+		CCNA_03808	0.13	+1.0
3,972,753	+		CCNA_03808	0.13	+1.2
3,972,781	-		CCNA_03808	0.18	-0.7
3,972,857	+		CCNA_03808	0.33	+1.1
3,972,873	+		CCNA_03808	0.36	+0.9
3,972,889	+		CCNA_03808	0.39	+1.2
3,972,897	+		CCNA_03808	0.41	+1.4
3,972,897	+		CCNA_03808	0.41	+1.4
3,972,902	+		CCNA_03808	0.42	+0.8
3,972,905	-		CCNA_03808	0.42	-0.9
3,972,909	+		CCNA_03808	0.43	+1.3
3,972,909	+		CCNA_03808	0.43	+1.4
3,972,972	+				+1.7
3,972,991	+		CCNA_03808	0.59	+1.6