Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03431

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,593,369	+				-0.9
3,593,391	+				-0.7
3,593,423	-				-0.7
3,593,435	+		CCNA_03429	0.11	-0.4
3,593,438	+		CCNA_03429	0.12	-1.0
3,593,480	-		CCNA_03429	0.18	+0.3
3,593,491	-		CCNA_03429	0.20	+0.7
3,593,513	+		CCNA_03429	0.24	-0.9
3,593,521	-		CCNA_03429	0.25	+0.2
3,593,570	-		CCNA_03429	0.33	+0.1
3,593,580	-		CCNA_03429	0.35	-2.9
3,593,607	+		CCNA_03429	0.39	-0.8
3,593,607	+		CCNA_03429	0.39	+3.2
3,593,615	-				+1.2
3,593,731	+		CCNA_03429	0.59	-1.6
3,593,751	+		CCNA_03429	0.62	+0.6
3,593,846	-		CCNA_03429	0.78	+1.4
3,594,254	+				+1.2
3,594,262	-				+0.9
3,594,299	+				-0.5
3,594,321	+				-0.3
3,594,321	+				+0.8
3,594,329	-				-0.1
3,594,381	-				+0.5
3,594,403	+				-0.9
3,594,406	-				-0.5
3,594,408	+				+0.6
3,594,411	-				+0.2
3,594,437	-				+0.8
3,594,437	-				+0.1
3,594,437	-				+1.3
3,594,438	+				+0.5
3,594,438	+				+0.7
3,594,451	+		CCNA_03431	0.10	+1.3
3,594,459	-		CCNA_03431	0.11	+1.2
3,594,545	-		CCNA_03431	0.17	-1.6
3,594,550	+		CCNA_03431	0.18	-0.0
3,594,552	+		CCNA_03431	0.18	+0.5
3,594,552	+		CCNA_03431	0.18	+1.8
3,594,552	+		CCNA_03431	0.18	+0.3
3,594,560	-		CCNA_03431	0.19	+0.1
3,594,577	-		CCNA_03431	0.20	+2.3
3,594,626	+		CCNA_03431	0.24	+1.7
3,594,626	+		CCNA_03431	0.24	+0.9
3,594,642	+		CCNA_03431	0.25	+1.6
3,594,650	-		CCNA_03431	0.25	-0.2
3,594,694	+				+1.0
3,594,746	+		CCNA_03431	0.33	+1.2
3,594,747	+		CCNA_03431	0.33	+1.7
3,594,763	-		CCNA_03431	0.34	+0.9
3,594,769	+		CCNA_03431	0.35	+1.4
3,594,779	-		CCNA_03431	0.35	-1.1
3,594,790	+		CCNA_03431	0.36	+1.0
3,594,820	+		CCNA_03431	0.39	+1.1
3,594,827	+		CCNA_03431	0.39	+0.9
3,594,857	+		CCNA_03431	0.41	+1.6
3,594,857	+		CCNA_03431	0.41	+1.4
3,594,857	+		CCNA_03431	0.41	+1.2
3,594,863	+		CCNA_03431	0.42	+0.7
3,594,863	+		CCNA_03431	0.42	+1.1
3,594,865	-		CCNA_03431	0.42	+1.1
3,594,865	-		CCNA_03431	0.42	+0.9
3,594,888	-		CCNA_03431	0.44	+0.3
3,594,911	+		CCNA_03431	0.46	+1.6
3,594,926	+		CCNA_03431	0.47	+1.8
3,594,926	+		CCNA_03431	0.47	+1.4
3,594,934	+		CCNA_03431	0.47	+1.5
3,594,934	-		CCNA_03431	0.47	-0.2
3,594,934	-		CCNA_03431	0.47	+0.3
3,594,934	-		CCNA_03431	0.47	+0.8
3,594,953	+		CCNA_03431	0.49	+1.9
3,594,954	+		CCNA_03431	0.49	+2.6
3,594,957	-		CCNA_03431	0.49	-0.7
3,594,959	+		CCNA_03431	0.49	+1.3
3,594,962	-		CCNA_03431	0.49	+0.2
3,594,980	+		CCNA_03431	0.51	+1.5
3,594,993	+		CCNA_03431	0.52	+1.3
3,594,993	+		CCNA_03431	0.52	+1.6
3,594,993	+		CCNA_03431	0.52	+1.9
3,594,993	+		CCNA_03431	0.52	+2.1
3,594,999	-		CCNA_03431	0.52	+1.3
3,595,001	-		CCNA_03431	0.52	-1.6
3,595,001	-		CCNA_03431	0.52	+1.0
3,595,001	-		CCNA_03431	0.52	+0.4
3,595,001	-		CCNA_03431	0.52	+0.3
3,595,009	-		CCNA_03431	0.53	-1.7
3,595,034	-		CCNA_03431	0.55	+0.8
3,595,046	+		CCNA_03431	0.56	+1.2
3,595,047	+		CCNA_03431	0.56	+1.9
3,595,073	+		CCNA_03431	0.58	+1.4
3,595,106	+		CCNA_03431	0.61	+1.2
3,595,113	-		CCNA_03431	0.61	-0.0
3,595,124	+		CCNA_03431	0.62	+1.5
3,595,131	+		CCNA_03431	0.62	+1.7
3,595,131	+		CCNA_03431	0.62	+1.3
3,595,139	-		CCNA_03431	0.63	+0.1
3,595,156	+		CCNA_03431	0.64	+1.6
3,595,162	+		CCNA_03431	0.65	+1.4
3,595,162	-		CCNA_03431	0.65	+1.1
3,595,177	+		CCNA_03431	0.66	+1.9
3,595,199	-		CCNA_03431	0.68	+1.0
3,595,214	+		CCNA_03431	0.69	-0.1
3,595,214	+		CCNA_03431	0.69	+1.0
3,595,214	+		CCNA_03431	0.69	+1.8
3,595,214	+		CCNA_03431	0.69	+1.4
3,595,214	+		CCNA_03431	0.69	+1.3
3,595,214	+		CCNA_03431	0.69	+0.8
3,595,214	+		CCNA_03431	0.69	+1.6
3,595,214	+		CCNA_03431	0.69	+1.2
3,595,214	+		CCNA_03431	0.69	+1.3
3,595,214	+		CCNA_03431	0.69	+1.6
3,595,214	+		CCNA_03431	0.69	+1.2
3,595,214	+		CCNA_03431	0.69	+1.3
3,595,214	+		CCNA_03431	0.69	+1.8
3,595,214	+		CCNA_03431	0.69	+0.2
3,595,214	+		CCNA_03431	0.69	+1.5
3,595,214	+		CCNA_03431	0.69	+1.0
3,595,214	+		CCNA_03431	0.69	+1.0
3,595,214	+		CCNA_03431	0.69	+2.1
3,595,214	+		CCNA_03431	0.69	+1.0
3,595,214	+		CCNA_03431	0.69	+1.3
3,595,214	+		CCNA_03431	0.69	+1.3
3,595,214	+		CCNA_03431	0.69	+1.5
3,595,214	+		CCNA_03431	0.69	+1.3
3,595,214	+		CCNA_03431	0.69	+1.2
3,595,214	+		CCNA_03431	0.69	+1.8
3,595,214	+		CCNA_03431	0.69	+0.6
3,595,216	-		CCNA_03431	0.69	+0.5
3,595,222	-		CCNA_03431	0.69	-0.1
3,595,222	-		CCNA_03431	0.69	-0.1
3,595,222	-		CCNA_03431	0.69	+1.8
3,595,222	-		CCNA_03431	0.69	+0.2
3,595,222	-		CCNA_03431	0.69	+1.0
3,595,222	-		CCNA_03431	0.69	+0.2
3,595,222	-		CCNA_03431	0.69	+0.6
3,595,222	-		CCNA_03431	0.69	-0.1
3,595,222	-		CCNA_03431	0.69	+1.2
3,595,222	-		CCNA_03431	0.69	+0.3
3,595,222	-		CCNA_03431	0.69	+0.7
3,595,222	-		CCNA_03431	0.69	-0.1
3,595,222	-		CCNA_03431	0.69	+1.1
3,595,222	-		CCNA_03431	0.69	+0.2
3,595,222	-		CCNA_03431	0.69	+1.0
3,595,222	-		CCNA_03431	0.69	+0.0
3,595,222	-		CCNA_03431	0.69	-0.2
3,595,222	-		CCNA_03431	0.69	+1.6
3,595,222	-		CCNA_03431	0.69	-0.8
3,595,224	+		CCNA_03431	0.70	+0.7
3,595,229	+		CCNA_03431	0.70	+1.6
3,595,275	+		CCNA_03431	0.74	+1.1
3,595,291	-		CCNA_03431	0.75	+1.5
3,595,310	+		CCNA_03431	0.76	+0.8
3,595,317	+		CCNA_03431	0.77	+1.1
3,595,336	-		CCNA_03431	0.78	+1.5
3,595,344	-		CCNA_03431	0.79	+0.5
3,595,344	-		CCNA_03431	0.79	+0.6
3,595,348	+		CCNA_03431	0.79	+1.4
3,595,349	-		CCNA_03431	0.79	+1.0
3,595,467	+		CCNA_03431	0.88	+1.2
3,595,477	-		CCNA_03431	0.89	+1.1
3,595,499	-				-0.2
3,595,501	+				+1.5
3,595,568	+				+1.1
3,595,582	-				+1.9
3,595,589	+				+0.5
3,595,597	-				-0.1
3,595,597	-				-0.9
3,595,597	-				-1.3
3,595,597	-				-2.1
3,595,597	-				+0.7
3,595,597	-				+0.7
3,595,601	+				-0.6
3,595,601	+				+0.9
3,595,606	+				+1.4
3,595,606	+				+0.4
3,595,647	+				+1.3
3,595,647	+				+0.9
3,595,647	+				+0.1
3,595,649	+				+1.2
3,595,657	-				-0.9
3,595,657	-				-1.6
3,595,657	-				-1.0
3,595,681	-				-0.1
3,595,683	+				+1.0
3,595,683	+				+0.6
3,595,683	+				+0.1
3,595,683	+				-0.1
3,595,683	+				-0.1
3,595,691	-				-0.4
3,595,691	-				-1.1
3,595,691	-				-0.4
3,595,692	+				+0.7
3,595,699	-		CCNA_03432	0.11	+0.3
3,595,700	-		CCNA_03432	0.11	-0.1
3,595,711	+		CCNA_03432	0.12	+0.6
3,595,721	+		CCNA_03432	0.13	-0.5
3,595,721	+		CCNA_03432	0.13	-0.2
3,595,721	+		CCNA_03432	0.13	-0.1
3,595,723	+		CCNA_03432	0.13	+0.2
3,595,723	+		CCNA_03432	0.13	-1.2
3,595,723	+		CCNA_03432	0.13	-0.7
3,595,729	-		CCNA_03432	0.14	-0.4
3,595,729	-		CCNA_03432	0.14	+0.3
3,595,729	-		CCNA_03432	0.14	-2.3
3,595,731	-		CCNA_03432	0.14	-1.6
3,595,743	+		CCNA_03432	0.16	-1.7
3,595,751	-		CCNA_03432	0.17	+0.9
3,595,751	-		CCNA_03432	0.17	-0.1
3,595,753	-		CCNA_03432	0.17	-0.3
3,595,781	+		CCNA_03432	0.20	-0.5
3,595,789	-		CCNA_03432	0.21	+0.3
3,595,792	+		CCNA_03432	0.22	+0.1
3,595,798	-		CCNA_03432	0.22	-0.9
3,595,818	-		CCNA_03432	0.25	+0.0
3,595,818	-		CCNA_03432	0.25	-0.8
3,595,818	-		CCNA_03432	0.25	+1.2
3,595,827	+		CCNA_03432	0.26	-0.1
3,595,836	-		CCNA_03432	0.27	-0.1
3,595,857	+		CCNA_03432	0.29	-0.3
3,595,865	-		CCNA_03432	0.30	-1.4
3,595,960	+		CCNA_03432	0.41	+1.6
3,596,004	+		CCNA_03432	0.47	+0.2
3,596,010	+		CCNA_03432	0.47	+0.9
3,596,012	-		CCNA_03432	0.48	-0.9
3,596,012	-		CCNA_03432	0.48	+0.1
3,596,060	-		CCNA_03432	0.53	+0.6
3,596,072	-		CCNA_03432	0.55	+0.3
3,596,072	-		CCNA_03432	0.55	-0.1
3,596,085	+				+0.6
3,596,085	+		CCNA_03432	0.56	+2.2
3,596,093	-		CCNA_03432	0.57	-0.2
3,596,093	-		CCNA_03432	0.57	+0.2
3,596,095	-		CCNA_03432	0.57	-0.5
3,596,100	-		CCNA_03432	0.58	-0.4
3,596,100	-		CCNA_03432	0.58	+0.5
3,596,100	-		CCNA_03432	0.58	+0.4
3,596,100	-		CCNA_03432	0.58	-0.2
3,596,111	+		CCNA_03432	0.59	-0.6
3,596,111	+		CCNA_03432	0.59	+0.4
3,596,118	-		CCNA_03432	0.60	-0.4
3,596,119	-		CCNA_03432	0.60	-1.3
3,596,119	-		CCNA_03432	0.60	-0.9
3,596,120	-		CCNA_03432	0.60	+0.2
3,596,165	-		CCNA_03432	0.66	-0.0
3,596,178	-		CCNA_03432	0.67	-0.3
3,596,192	+		CCNA_03432	0.69	-0.6
3,596,192	+		CCNA_03432	0.69	+0.8
3,596,192	+		CCNA_03432	0.69	-1.2
3,596,200	-		CCNA_03432	0.70	-0.7
3,596,200	-		CCNA_03432	0.70	-2.5
3,596,200	-		CCNA_03432	0.70	-0.5
3,596,203	+		CCNA_03432	0.70	+1.2
3,596,204	-		CCNA_03432	0.70	-1.9
3,596,213	+		CCNA_03432	0.71	-0.4
3,596,213	+		CCNA_03432	0.71	+0.2
3,596,213	+		CCNA_03432	0.71	-0.1
3,596,213	+		CCNA_03432	0.71	-1.8
3,596,213	+		CCNA_03432	0.71	-1.6
3,596,213	+		CCNA_03432	0.71	-2.1
3,596,225	+		CCNA_03432	0.73	-0.3
3,596,288	+		CCNA_03432	0.80	-1.0
3,596,297	+		CCNA_03432	0.81	+1.1
3,596,309	-		CCNA_03432	0.83	+1.2
3,596,331	-		CCNA_03432	0.85	+0.9
3,596,341	-		CCNA_03432	0.87	-0.1
3,596,354	-		CCNA_03432	0.88	+0.7
3,596,356	+		CCNA_03432	0.88	-0.1
3,596,364	+		CCNA_03432	0.89	-1.0
3,596,365	-		CCNA_03432	0.89	+0.2
3,596,447	-				-1.2
3,596,473	-				+0.7
3,596,473	-				-1.4
3,596,485	+				-0.4
3,596,515	-				-0.2
3,596,553	+				-2.8
3,596,555	-				+1.5
3,596,559	+				+1.2
3,596,584	-				-0.7
3,596,594	+				+0.0
3,596,600	-				-1.1