Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03239

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,402,191	+				+1.3
3,402,208	+				-1.2
3,402,213	+				+0.6
3,402,213	+				+1.2
3,402,216	-				+0.6
3,402,216	-				+1.2
3,402,216	-				+1.8
3,402,216	-				+1.0
3,402,216	-				+1.6
3,402,221	-		CCNA_03238	0.10	+1.7
3,402,378	-		CCNA_03238	0.27	+1.2
3,402,386	+		CCNA_03238	0.28	+1.5
3,402,386	+		CCNA_03238	0.28	+1.8
3,402,386	+		CCNA_03238	0.28	+0.2
3,402,386	+		CCNA_03238	0.28	+0.6
3,402,386	+		CCNA_03238	0.28	+1.2
3,402,386	+		CCNA_03238	0.28	+0.2
3,402,386	+		CCNA_03238	0.28	+1.2
3,402,394	-		CCNA_03238	0.29	-0.5
3,402,394	-		CCNA_03238	0.29	-0.6
3,402,394	-		CCNA_03238	0.29	+1.7
3,402,394	-		CCNA_03238	0.29	+0.2
3,402,394	-		CCNA_03238	0.29	+0.2
3,402,394	-		CCNA_03238	0.29	+1.7
3,402,394	-		CCNA_03238	0.29	-0.6
3,402,394	-		CCNA_03238	0.29	+3.8
3,402,394	-		CCNA_03238	0.29	+0.6
3,402,394	-		CCNA_03238	0.29	+1.2
3,402,394	-		CCNA_03238	0.29	+0.9
3,402,420	+		CCNA_03238	0.32	+0.6
3,402,420	+		CCNA_03238	0.32	-0.1
3,402,420	+		CCNA_03238	0.32	+1.2
3,402,428	-		CCNA_03238	0.33	+0.5
3,402,428	-		CCNA_03238	0.33	+1.2
3,402,428	-		CCNA_03238	0.33	-0.1
3,402,428	-		CCNA_03238	0.33	+0.4
3,402,428	-		CCNA_03238	0.33	+2.7
3,402,428	-		CCNA_03238	0.33	+0.5
3,402,438	-		CCNA_03238	0.34	+0.6
3,402,455	-		CCNA_03238	0.36	+2.1
3,402,457	+		CCNA_03238	0.36	+1.2
3,402,457	+		CCNA_03238	0.36	-1.6
3,402,457	+		CCNA_03238	0.36	+1.6
3,402,465	-		CCNA_03238	0.37	+0.6
3,402,465	-		CCNA_03238	0.37	+1.0
3,402,465	-		CCNA_03238	0.37	-0.1
3,402,465	-		CCNA_03238	0.37	+0.2
3,402,467	+		CCNA_03238	0.37	+0.2
3,402,467	+		CCNA_03238	0.37	+1.2
3,402,467	+		CCNA_03238	0.37	+0.6
3,402,475	-		CCNA_03238	0.38	-1.4
3,402,475	-		CCNA_03238	0.38	+1.4
3,402,475	-		CCNA_03238	0.38	+1.5
3,402,488	-		CCNA_03238	0.39	+2.5
3,402,498	-		CCNA_03238	0.40	+0.2
3,402,503	-		CCNA_03238	0.41	+2.8
3,402,520	-		CCNA_03238	0.43	+1.4
3,402,520	-		CCNA_03238	0.43	+0.6
3,402,552	+		CCNA_03238	0.46	-0.1
3,402,575	+		CCNA_03238	0.49	+2.2
3,402,578	-		CCNA_03238	0.49	+0.0
3,402,578	-		CCNA_03238	0.49	+1.4
3,402,638	-		CCNA_03238	0.55	+1.6
3,402,649	+		CCNA_03238	0.57	-0.1
3,402,674	+		CCNA_03238	0.59	+2.2
3,402,674	-		CCNA_03238	0.59	+1.0
3,402,674	-		CCNA_03238	0.59	+1.2
3,402,679	+		CCNA_03238	0.60	+0.3
3,402,687	-		CCNA_03238	0.61	-4.7
3,402,692	+		CCNA_03238	0.61	+1.0
3,402,728	+		CCNA_03238	0.65	+1.6
3,402,728	+		CCNA_03238	0.65	-1.0
3,402,730	-		CCNA_03238	0.65	-0.1
3,402,735	-		CCNA_03238	0.66	+0.5
3,402,736	-		CCNA_03238	0.66	-0.4
3,402,751	+		CCNA_03238	0.68	-0.6
3,402,787	+		CCNA_03238	0.72	-0.6
3,402,794	-		CCNA_03238	0.72	+1.8
3,402,795	-		CCNA_03238	0.73	+0.6
3,402,799	+		CCNA_03238	0.73	+0.2
3,402,807	-		CCNA_03238	0.74	+0.7
3,402,842	-		CCNA_03238	0.78	+1.3
3,402,868	+		CCNA_03238	0.80	+2.0
3,402,901	-		CCNA_03238	0.84	+2.2
3,402,929	+		CCNA_03238	0.87	+0.6
3,402,937	-		CCNA_03238	0.88	+0.2
3,402,938	+		CCNA_03238	0.88	-0.7
3,402,953	+		CCNA_03238	0.90	+1.2
3,402,961	-				-1.1
3,402,966	-				+1.4
3,402,968	+				-1.0
3,402,973	+				+1.5
3,402,981	-				+1.2
3,403,007	+				-1.2
3,403,007	+				+1.9
3,403,027	-				-1.4
3,403,032	-				+2.5
3,403,042	+				-1.5
3,403,042	+				+0.2
3,403,050	-				+0.7
3,403,068	-				-0.1
3,403,084	-				-0.9
3,403,105	-				+0.0
3,403,115	-				-0.4
3,403,172	+				-0.1
3,403,172	+				+0.9
3,403,172	+				-0.8
3,403,172	+				+3.2
3,403,173	+				+0.2
3,403,180	-				-0.4
3,403,230	+				-1.2
3,403,232	+				+1.2
3,403,232	+				+1.0
3,403,232	+				+2.2
3,403,238	-				+2.3
3,403,238	-				+2.2
3,403,292	-		CCNA_03239	0.11	+2.2
3,403,301	-		CCNA_03239	0.11	+2.0
3,403,303	-		CCNA_03239	0.12	+1.1
3,403,338	+		CCNA_03239	0.15	+2.2
3,403,369	-		CCNA_03239	0.18	+1.7
3,403,376	-		CCNA_03239	0.18	+1.9
3,403,400	-		CCNA_03239	0.20	+1.5
3,403,413	+		CCNA_03239	0.21	+2.2
3,403,437	+		CCNA_03239	0.24	+0.6
3,403,445	-		CCNA_03239	0.24	+0.5
3,403,447	+		CCNA_03239	0.25	+2.2
3,403,455	-		CCNA_03239	0.25	+1.5
3,403,463	-		CCNA_03239	0.26	+1.9
3,403,490	+		CCNA_03239	0.28	-1.2
3,403,549	+		CCNA_03239	0.34	+0.6
3,403,554	+		CCNA_03239	0.34	+1.2
3,403,589	+		CCNA_03239	0.37	+1.2
3,403,638	+		CCNA_03239	0.42	+0.6
3,403,641	-		CCNA_03239	0.42	+2.2
3,403,646	-		CCNA_03239	0.43	+1.5
3,403,646	-		CCNA_03239	0.43	+0.1
3,403,646	-		CCNA_03239	0.43	+1.0
3,403,646	-		CCNA_03239	0.43	+1.8
3,403,646	-		CCNA_03239	0.43	+1.9
3,403,648	+		CCNA_03239	0.43	+3.2
3,403,703	+		CCNA_03239	0.48	+0.2
3,403,711	-		CCNA_03239	0.48	+0.9
3,403,711	-		CCNA_03239	0.48	-0.1
3,403,711	-		CCNA_03239	0.48	+1.5
3,403,724	-		CCNA_03239	0.50	+0.9
3,403,729	+		CCNA_03239	0.50	+2.8
3,403,732	-		CCNA_03239	0.50	-2.0
3,403,740	+		CCNA_03239	0.51	+1.2
3,403,740	+		CCNA_03239	0.51	+2.2
3,403,740	+		CCNA_03239	0.51	+0.6
3,403,740	+		CCNA_03239	0.51	+1.2
3,403,748	-		CCNA_03239	0.52	-1.0
3,403,748	-		CCNA_03239	0.52	+1.5
3,403,763	-		CCNA_03239	0.53	-0.2
3,403,787	+		CCNA_03239	0.55	+2.2
3,403,788	+		CCNA_03239	0.55	+1.2
3,403,788	+		CCNA_03239	0.55	+0.6
3,403,788	+		CCNA_03239	0.55	+0.2
3,403,796	-		CCNA_03239	0.56	+2.1
3,403,796	-		CCNA_03239	0.56	+0.6
3,403,796	-		CCNA_03239	0.56	+1.6
3,403,796	-		CCNA_03239	0.56	+0.3
3,403,796	-		CCNA_03239	0.56	+0.6
3,403,796	-		CCNA_03239	0.56	-1.5
3,403,796	-		CCNA_03239	0.56	+1.9
3,403,796	-		CCNA_03239	0.56	+2.2
3,403,796	-		CCNA_03239	0.56	-0.1
3,403,796	-		CCNA_03239	0.56	+0.2
3,403,796	-		CCNA_03239	0.56	+1.3
3,403,802	-		CCNA_03239	0.57	+1.5
3,403,818	-		CCNA_03239	0.58	+0.3
3,403,836	-		CCNA_03239	0.60	-1.1
3,403,841	-		CCNA_03239	0.60	-1.6
3,403,841	-		CCNA_03239	0.60	+1.2
3,403,841	-		CCNA_03239	0.60	+5.0
3,403,873	-		CCNA_03239	0.63	+2.2
3,403,941	-		CCNA_03239	0.69	+1.2
3,403,951	-		CCNA_03239	0.70	+0.5
3,404,053	+		CCNA_03239	0.79	+2.2
3,404,090	-		CCNA_03239	0.83	+2.1
3,404,112	-		CCNA_03239	0.85	-1.2
3,404,118	-		CCNA_03239	0.85	+0.9
3,404,133	+		CCNA_03239	0.87	+2.2
3,404,160	+		CCNA_03239	0.89	+1.8
3,404,160	+		CCNA_03239	0.89	+2.2
3,404,160	+		CCNA_03239	0.89	+0.9
3,404,160	+		CCNA_03239	0.89	+2.8
3,404,168	-		CCNA_03239	0.90	+0.9
3,404,168	-		CCNA_03239	0.90	+1.3
3,404,168	-		CCNA_03239	0.90	+1.1
3,404,168	-		CCNA_03239	0.90	-0.2
3,404,168	-		CCNA_03239	0.90	+0.4
3,404,168	-		CCNA_03239	0.90	+2.2
3,404,168	-		CCNA_03239	0.90	+0.2
3,404,184	+				+2.2
3,404,192	-				+1.1
3,404,197	-				+1.5
3,404,219	+				-0.5
3,404,237	+				+2.2
3,404,245	-				+1.3
3,404,252	+				-1.1
3,404,260	-				+1.3
3,404,274	-				+0.4
3,404,302	-				+1.2
3,404,315	-				+0.2
3,404,315	-				+1.4
3,404,325	-				+0.3
3,404,336	+				+2.2
3,404,336	+				+1.2
3,404,416	+				+2.2
3,404,424	-				+0.8
3,404,424	-				+0.6
3,404,491	-				+0.0
3,404,510	-		CCNA_03240	0.11	+0.6
3,404,531	+		CCNA_03240	0.12	+2.2
3,404,539	+		CCNA_03240	0.13	+2.2
3,404,558	+		CCNA_03240	0.14	-0.1
3,404,558	+		CCNA_03240	0.14	+1.6
3,404,566	-		CCNA_03240	0.15	+1.1
3,404,613	+		CCNA_03240	0.18	-1.2
3,404,623	+		CCNA_03240	0.19	+0.6
3,404,626	-		CCNA_03240	0.19	+0.0
3,404,644	-		CCNA_03240	0.21	-0.0
3,404,644	-		CCNA_03240	0.21	+0.6
3,404,649	-		CCNA_03240	0.21	+0.1
3,404,701	-		CCNA_03240	0.25	+0.1
3,404,717	+		CCNA_03240	0.26	-2.0
3,404,723	+		CCNA_03240	0.26	+3.2
3,404,742	+		CCNA_03240	0.28	+1.4
3,404,744	+		CCNA_03240	0.28	+0.4
3,404,861	+		CCNA_03240	0.36	-0.8
3,404,871	+		CCNA_03240	0.37	-1.2
3,404,871	+		CCNA_03240	0.37	-1.4
3,404,872	+		CCNA_03240	0.37	+0.9
3,404,879	-		CCNA_03240	0.38	+1.3
3,404,974	-		CCNA_03240	0.44	+1.0
3,404,974	-		CCNA_03240	0.44	+0.1
3,405,009	+		CCNA_03240	0.47	+1.2
3,405,017	-		CCNA_03240	0.48	+1.1
3,405,017	-		CCNA_03240	0.48	+0.9
3,405,037	-		CCNA_03240	0.49	-1.7
3,405,065	+		CCNA_03240	0.51	-0.7
3,405,103	-		CCNA_03240	0.54	-2.0
3,405,103	-		CCNA_03240	0.54	+0.4
3,405,194	+		CCNA_03240	0.60	-0.8
3,405,204	+		CCNA_03240	0.61	-0.4
3,405,206	+		CCNA_03240	0.61	-1.5
3,405,219	-		CCNA_03240	0.62	+0.2
3,405,221	-		CCNA_03240	0.62	-1.1