Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03180

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,338,416	+		CCNA_03179	0.21	-0.9
3,338,423	-		CCNA_03179	0.21	+0.6
3,338,443	-		CCNA_03179	0.23	-1.7
3,338,493	-		CCNA_03179	0.27	-0.1
3,338,493	-		CCNA_03179	0.27	-0.5
3,338,493	-		CCNA_03179	0.27	-0.3
3,338,493	-		CCNA_03179	0.27	-1.0
3,338,503	-		CCNA_03179	0.27	-0.6
3,338,519	-		CCNA_03179	0.29	-0.1
3,338,545	-		CCNA_03179	0.31	+1.9
3,338,606	-		CCNA_03179	0.36	-0.4
3,338,619	-		CCNA_03179	0.37	-1.1
3,338,624	-		CCNA_03179	0.37	+0.7
3,338,624	-		CCNA_03179	0.37	+0.2
3,338,670	+		CCNA_03179	0.41	-0.1
3,338,670	+		CCNA_03179	0.41	-1.1
3,338,673	-		CCNA_03179	0.41	-0.8
3,338,680	+				-0.4
3,338,680	+		CCNA_03179	0.41	-1.1
3,338,687	+		CCNA_03179	0.42	+0.8
3,338,687	+		CCNA_03179	0.42	+1.1
3,338,695	-		CCNA_03179	0.42	-1.3
3,338,736	+		CCNA_03179	0.46	-2.4
3,338,760	-		CCNA_03179	0.48	-2.2
3,338,760	-		CCNA_03179	0.48	+0.2
3,338,784	+		CCNA_03179	0.49	+1.5
3,338,784	+		CCNA_03179	0.49	-0.8
3,338,784	+		CCNA_03179	0.49	-1.6
3,338,792	-		CCNA_03179	0.50	-0.9
3,338,841	-		CCNA_03179	0.54	+1.2
3,338,841	-				-0.4
3,338,891	-		CCNA_03179	0.58	+0.0
3,338,901	+		CCNA_03179	0.59	+0.5
3,338,914	+		CCNA_03179	0.60	+0.2
3,338,923	-		CCNA_03179	0.60	-1.3
3,338,923	-		CCNA_03179	0.60	-1.7
3,338,925	+		CCNA_03179	0.60	+0.1
3,338,934	+		CCNA_03179	0.61	+0.2
3,338,948	-		CCNA_03179	0.62	+0.2
3,338,963	+		CCNA_03179	0.63	-0.7
3,338,992	+		CCNA_03179	0.66	+0.2
3,339,002	+		CCNA_03179	0.67	-0.0
3,339,006	-		CCNA_03179	0.67	-0.6
3,339,019	+		CCNA_03179	0.68	+0.5
3,339,163	+		CCNA_03179	0.79	+0.6
3,339,169	+		CCNA_03179	0.80	-0.0
3,339,177	-		CCNA_03179	0.80	-0.9
3,339,182	+		CCNA_03179	0.81	-0.6
3,339,187	+		CCNA_03179	0.81	-0.4
3,339,192	+		CCNA_03179	0.81	-0.4
3,339,192	+		CCNA_03179	0.81	-0.6
3,339,200	-		CCNA_03179	0.82	-0.9
3,339,200	-		CCNA_03179	0.82	-2.2
3,339,206	-		CCNA_03179	0.82	-0.3
3,339,216	+		CCNA_03179	0.83	-1.8
3,339,242	-		CCNA_03179	0.85	-0.6
3,339,245	+		CCNA_03179	0.86	+1.5
3,339,283	+		CCNA_03179	0.88	-2.0
3,339,283	+		CCNA_03179	0.88	-1.1
3,339,283	+		CCNA_03179	0.88	-0.4
3,339,283	+		CCNA_03179	0.88	-0.4
3,339,291	-		CCNA_03179	0.89	-1.3
3,339,291	-		CCNA_03179	0.89	-0.8
3,339,298	+		CCNA_03179	0.90	+0.2
3,339,384	+				-0.1
3,339,390	+				-1.0
3,339,390	+				-2.0
3,339,423	+				+0.9
3,339,423	+				-0.4
3,339,431	-				-0.3
3,339,431	-				-1.1
3,339,431	-				+0.0
3,339,433	+				+0.9
3,339,584	+		CCNA_03180	0.23	-1.9
3,339,590	+		CCNA_03180	0.24	-1.6
3,339,598	+		CCNA_03180	0.25	-2.1
3,339,600	+		CCNA_03180	0.25	-2.2
3,339,613	+		CCNA_03180	0.27	-1.4
3,339,620	+		CCNA_03180	0.28	-0.4
3,339,663	+		CCNA_03180	0.34	-0.5
3,339,673	-		CCNA_03180	0.35	-1.0
3,339,688	-		CCNA_03180	0.37	-1.5
3,339,748	+		CCNA_03180	0.45	-0.8
3,339,751	-		CCNA_03180	0.46	+0.6
3,339,751	-		CCNA_03180	0.46	-0.3
3,339,756	-		CCNA_03180	0.46	-0.9
3,339,799	-		CCNA_03180	0.52	-1.8
3,339,809	+		CCNA_03180	0.54	-0.6
3,339,810	+		CCNA_03180	0.54	-0.4
3,339,817	-		CCNA_03180	0.55	-2.0
3,339,828	-		CCNA_03180	0.56	-0.7
3,339,828	-		CCNA_03180	0.56	-1.1
3,339,828	-		CCNA_03180	0.56	-2.1
3,339,853	-		CCNA_03180	0.60	-0.1
3,339,875	+		CCNA_03180	0.63	+0.6
3,339,961	+		CCNA_03180	0.74	-0.6
3,339,962	+		CCNA_03180	0.75	-0.3
3,339,969	-		CCNA_03180	0.76	-2.3
3,339,972	+		CCNA_03180	0.76	-0.8
3,339,980	-		CCNA_03180	0.77	-1.3
3,339,986	+		CCNA_03180	0.78	-1.5
3,339,994	-		CCNA_03180	0.79	-1.6
3,340,062	+		CCNA_03180	0.88	-0.4
3,340,081	-				-0.4
3,340,081	-				-0.9
3,340,088	-				-2.0
3,340,136	-				-1.2
3,340,249	-				+0.2
3,340,253	+				-0.4
3,340,253	+				+0.0
3,340,253	+				+0.5
3,340,253	+				+0.6
3,340,253	+				+0.5
3,340,253	+				-0.6
3,340,253	+				+0.3
3,340,253	+				-0.2
3,340,253	+				-0.4
3,340,253	+				-0.6
3,340,253	+				-0.1
3,340,261	-				+0.0
3,340,261	-				-0.3
3,340,261	-				-1.3
3,340,261	-				+0.6
3,340,261	-				+0.6
3,340,261	-				+1.2
3,340,261	-				-0.4
3,340,261	-				-1.1
3,340,320	-				+1.2
3,340,327	-				-0.8
3,340,355	+				-0.4
3,340,439	+				-0.4
3,340,439	+				-1.1
3,340,439	+				-3.5
3,340,439	+				+0.1
3,340,465	+				+0.8
3,340,465	+				-1.4
3,340,526	-				-1.1
3,340,567	+		CCNA_03181	0.11	+0.2
3,340,567	+		CCNA_03181	0.11	+0.1
3,340,575	-		CCNA_03181	0.12	-0.5
3,340,642	-		CCNA_03181	0.17	+0.6
3,340,648	+		CCNA_03181	0.18	-0.0
3,340,648	+		CCNA_03181	0.18	-2.1
3,340,648	+		CCNA_03181	0.18	+0.6
3,340,656	-		CCNA_03181	0.18	+1.0
3,340,656	-		CCNA_03181	0.18	-0.6
3,340,656	-		CCNA_03181	0.18	+2.2
3,340,658	+		CCNA_03181	0.18	-1.4
3,340,666	-		CCNA_03181	0.19	+0.6
3,340,745	+		CCNA_03181	0.25	-0.8
3,340,749	+		CCNA_03181	0.25	-1.8
3,340,764	-		CCNA_03181	0.27	-1.0
3,340,799	+		CCNA_03181	0.29	-0.1
3,340,802	-		CCNA_03181	0.30	-1.7
3,340,825	-		CCNA_03181	0.31	+0.5
3,340,838	+		CCNA_03181	0.32	-1.4
3,340,864	+		CCNA_03181	0.35	-2.2
3,340,875	+		CCNA_03181	0.35	-0.3
3,340,898	+		CCNA_03181	0.37	+0.6
3,340,903	+		CCNA_03181	0.38	+1.2
3,340,911	-		CCNA_03181	0.38	+0.9
3,340,911	-		CCNA_03181	0.38	-1.5
3,340,911	-		CCNA_03181	0.38	+0.2
3,340,911	-		CCNA_03181	0.38	-1.4
3,340,911	-		CCNA_03181	0.38	+0.2
3,340,954	-		CCNA_03181	0.42	-1.6
3,340,961	-		CCNA_03181	0.42	+0.6
3,340,976	+		CCNA_03181	0.43	+1.0
3,340,985	-		CCNA_03181	0.44	-1.5
3,340,987	+		CCNA_03181	0.44	-0.1
3,340,990	-		CCNA_03181	0.44	+0.4
3,341,013	+		CCNA_03181	0.46	-1.6
3,341,037	-		CCNA_03181	0.48	-0.9
3,341,053	+		CCNA_03181	0.49	+1.5
3,341,056	-		CCNA_03181	0.50	-1.1
3,341,061	-		CCNA_03181	0.50	+1.2
3,341,061	-		CCNA_03181	0.50	+0.2
3,341,061	-		CCNA_03181	0.50	+0.0
3,341,061	-		CCNA_03181	0.50	-2.0
3,341,073	+		CCNA_03181	0.51	-0.1
3,341,073	+		CCNA_03181	0.51	+0.6
3,341,073	+		CCNA_03181	0.51	+0.2
3,341,081	-		CCNA_03181	0.52	-2.5
3,341,101	-		CCNA_03181	0.53	-0.1