Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03062

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,212,822	-		CCNA_03060	0.47	+0.6
3,212,836	+		CCNA_03060	0.55	+1.0
3,212,889	+		CCNA_03060	0.84	+0.3
3,212,910	+				+0.3
3,212,911	+				+1.4
3,212,923	-				-1.4
3,212,955	+				+0.4
3,212,963	-				-0.9
3,212,966	+				+0.8
3,212,966	+				+0.8
3,212,966	+				+0.6
3,212,974	-				+0.2
3,212,974	-				-0.7
3,212,974	-				+0.6
3,212,975	+				+0.7
3,212,975	+				-1.9
3,212,982	-				-1.0
3,212,983	-				+0.5
3,212,983	-				-0.4
3,212,983	-				-1.4
3,212,984	-				-0.5
3,212,984	-				-1.2
3,213,090	+				+0.1
3,213,090	+				-0.4
3,213,095	+		CCNA_03061	0.10	-0.8
3,213,098	-		CCNA_03061	0.11	-0.3
3,213,098	-		CCNA_03061	0.11	-1.9
3,213,098	-		CCNA_03061	0.11	-0.6
3,213,098	-		CCNA_03061	0.11	+1.2
3,213,098	-		CCNA_03061	0.11	-0.6
3,213,098	-		CCNA_03061	0.11	-2.9
3,213,098	-		CCNA_03061	0.11	-0.9
3,213,103	-		CCNA_03061	0.11	-1.8
3,213,148	+		CCNA_03061	0.17	-0.6
3,213,161	+		CCNA_03061	0.18	-0.1
3,213,164	-		CCNA_03061	0.19	-3.4
3,213,167	-				+2.6
3,213,169	-		CCNA_03061	0.19	-0.1
3,213,171	+		CCNA_03061	0.20	-1.5
3,213,207	-		CCNA_03061	0.24	+0.6
3,213,211	+		CCNA_03061	0.25	-0.4
3,213,211	+		CCNA_03061	0.25	-1.9
3,213,281	+		CCNA_03061	0.33	+0.5
3,213,281	+		CCNA_03061	0.33	-0.8
3,213,291	+		CCNA_03061	0.34	-0.2
3,213,293	+		CCNA_03061	0.35	-1.8
3,213,299	-		CCNA_03061	0.35	-1.8
3,213,299	-		CCNA_03061	0.35	-0.2
3,213,327	+		CCNA_03061	0.39	-0.6
3,213,338	+				+1.2
3,213,338	+		CCNA_03061	0.40	-0.8
3,213,394	-		CCNA_03061	0.47	-0.4
3,213,413	-		CCNA_03061	0.49	-0.2
3,213,448	-		CCNA_03061	0.53	+0.2
3,213,465	-		CCNA_03061	0.55	-0.2
3,213,472	-		CCNA_03061	0.56	+0.5
3,213,472	-		CCNA_03061	0.56	+0.2
3,213,522	-				+1.2
3,213,523	+		CCNA_03061	0.63	-1.1
3,213,531	-		CCNA_03061	0.64	+0.5
3,213,587	-		CCNA_03061	0.70	-0.2
3,213,606	-		CCNA_03061	0.73	-0.7
3,213,615	+		CCNA_03061	0.74	-0.2
3,213,623	-		CCNA_03061	0.75	+0.1
3,213,623	-		CCNA_03061	0.75	+0.0
3,213,633	-		CCNA_03061	0.76	+0.2
3,213,633	-		CCNA_03061	0.76	+0.2
3,213,639	+		CCNA_03061	0.77	-0.6
3,213,650	+		CCNA_03061	0.78	-0.4
3,213,671	+		CCNA_03061	0.81	-0.5
3,213,679	-		CCNA_03061	0.82	+0.6
3,213,704	+		CCNA_03061	0.85	-0.8
3,213,719	+		CCNA_03061	0.86	-0.4
3,213,719	+		CCNA_03061	0.86	-0.9
3,213,726	+		CCNA_03061	0.87	-1.8
3,213,726	+		CCNA_03061	0.87	-1.2
3,213,726	+		CCNA_03061	0.87	-3.1
3,213,726	+		CCNA_03061	0.87	-0.2
3,213,726	+		CCNA_03061	0.87	+0.2
3,213,726	+		CCNA_03061	0.87	-0.4
3,213,734	-		CCNA_03061	0.88	-0.2
3,213,734	-		CCNA_03061	0.88	-0.1
3,213,734	-		CCNA_03061	0.88	+1.6
3,213,734	-		CCNA_03061	0.88	+0.3
3,213,734	-		CCNA_03061	0.88	+0.5
3,213,734	-		CCNA_03061	0.88	+1.2
3,213,734	-		CCNA_03061	0.88	+0.7
3,213,778	+				-1.4
3,213,801	-				+0.5
3,213,801	-				+0.8
3,213,826	-				+0.5
3,213,877	-				+1.2
3,213,916	+		CCNA_03062	0.11	+0.5
3,213,970	+		CCNA_03062	0.16	+1.0
3,213,973	-		CCNA_03062	0.16	+2.1
3,213,975	+		CCNA_03062	0.16	+0.4
3,213,978	-		CCNA_03062	0.16	+2.4
3,213,983	-		CCNA_03062	0.17	+2.1
3,214,040	-		CCNA_03062	0.22	+2.1
3,214,054	+		CCNA_03062	0.23	+0.5
3,214,131	-		CCNA_03062	0.30	+2.5
3,214,134	+		CCNA_03062	0.30	-1.2
3,214,136	+		CCNA_03062	0.31	+1.6
3,214,150	+		CCNA_03062	0.32	+0.1
3,214,150	+		CCNA_03062	0.32	+0.8
3,214,150	+		CCNA_03062	0.32	+0.1
3,214,150	+		CCNA_03062	0.32	+1.6
3,214,150	+		CCNA_03062	0.32	+0.5
3,214,158	-		CCNA_03062	0.33	+2.6
3,214,158	-		CCNA_03062	0.33	+3.5
3,214,158	-		CCNA_03062	0.33	+2.5
3,214,168	-		CCNA_03062	0.33	+2.2
3,214,168	-		CCNA_03062	0.33	+2.5
3,214,168	-		CCNA_03062	0.33	+2.5
3,214,168	-		CCNA_03062	0.33	+2.2
3,214,168	-		CCNA_03062	0.33	+2.4
3,214,205	+		CCNA_03062	0.37	-0.6
3,214,245	-		CCNA_03062	0.40	+2.5
3,214,276	+		CCNA_03062	0.43	+0.4
3,214,294	-		CCNA_03062	0.45	+2.0
3,214,309	+				+1.5
3,214,316	-		CCNA_03062	0.47	+2.7
3,214,319	+		CCNA_03062	0.47	-0.2
3,214,319	+		CCNA_03062	0.47	+0.3
3,214,327	-		CCNA_03062	0.48	+2.7
3,214,342	-		CCNA_03062	0.49	+2.6
3,214,372	+		CCNA_03062	0.52	+1.1
3,214,372	+		CCNA_03062	0.52	+1.3
3,214,387	+		CCNA_03062	0.53	+0.6
3,214,390	-		CCNA_03062	0.53	+2.5
3,214,451	-		CCNA_03062	0.59	+1.5
3,214,469	-		CCNA_03062	0.60	+2.4
3,214,473	+		CCNA_03062	0.61	+1.1
3,214,479	-		CCNA_03062	0.61	+2.6
3,214,521	-		CCNA_03062	0.65	+2.5
3,214,572	-		CCNA_03062	0.70	+2.5
3,214,587	+		CCNA_03062	0.71	-0.2
3,214,589	-		CCNA_03062	0.71	+2.6
3,214,646	-		CCNA_03062	0.76	+2.6
3,214,717	+		CCNA_03062	0.83	+0.8
3,214,725	-		CCNA_03062	0.83	+2.3
3,214,736	-		CCNA_03062	0.84	+4.8
3,214,788	-		CCNA_03062	0.89	+2.2
3,214,788	-		CCNA_03062	0.89	+3.0
3,214,788	-		CCNA_03062	0.89	+2.1
3,214,798	-				+3.2
3,214,805	+				+0.4
3,214,812	+				-0.2
3,214,836	-				+2.6
3,214,857	-				+2.4
3,214,934	-				+2.6
3,214,999	+				+0.2
3,215,007	-				+2.1
3,215,007	-				+2.4
3,215,015	+				-0.1
3,215,021	-				+2.1
3,215,087	+				+1.0
3,215,123	+				+1.0
3,215,256	+				+0.8
3,215,319	+				+2.2
3,215,319	+				-1.1
3,215,319	+				+3.2
3,215,325	-				-0.2
3,215,327	-				+1.2
3,215,327	-				-0.7
3,215,327	-				+0.4
3,215,327	-				-0.6
3,215,327	-				+0.1
3,215,327	-				-0.1
3,215,327	-				+0.3
3,215,343	+				+0.3
3,215,346	-				-0.2
3,215,351	-				-0.3
3,215,390	+				+2.2
3,215,391	+				+0.2
3,215,411	-				-0.2
3,215,418	-				+0.6
3,215,445	-		CCNA_03063	0.11	+0.3
3,215,500	-		CCNA_03063	0.16	-0.3
3,215,520	-		CCNA_03063	0.18	+1.1
3,215,560	+		CCNA_03063	0.21	-0.4
3,215,570	+		CCNA_03063	0.22	-1.2
3,215,578	-		CCNA_03063	0.23	+0.2
3,215,594	+		CCNA_03063	0.24	+0.4
3,215,617	+		CCNA_03063	0.27	+2.2
3,215,625	-		CCNA_03063	0.27	-0.1
3,215,625	-		CCNA_03063	0.27	-1.1
3,215,625	-		CCNA_03063	0.27	+0.4
3,215,625	-		CCNA_03063	0.27	-0.5
3,215,625	-		CCNA_03063	0.27	+1.0
3,215,627	+		CCNA_03063	0.27	-0.8
3,215,627	+		CCNA_03063	0.27	-1.7
3,215,627	+		CCNA_03063	0.27	+0.6
3,215,627	+		CCNA_03063	0.27	-0.4
3,215,630	-		CCNA_03063	0.28	+0.2
3,215,635	-		CCNA_03063	0.28	-0.3
3,215,635	-		CCNA_03063	0.28	-1.1
3,215,635	-		CCNA_03063	0.28	+0.9
3,215,635	-		CCNA_03063	0.28	+0.0
3,215,659	+		CCNA_03063	0.30	+0.9
3,215,667	-		CCNA_03063	0.31	-0.7
3,215,667	-		CCNA_03063	0.31	-2.1
3,215,739	+		CCNA_03063	0.38	-1.5
3,215,740	-		CCNA_03063	0.38	-0.3
3,215,756	+		CCNA_03063	0.39	-0.1
3,215,764	-		CCNA_03063	0.40	-0.8
3,215,768	+		CCNA_03063	0.40	-1.2
3,215,776	-		CCNA_03063	0.41	+1.0
3,215,823	-		CCNA_03063	0.45	+2.8
3,215,823	-		CCNA_03063	0.45	+0.8
3,215,829	-		CCNA_03063	0.46	+0.3
3,215,829	-		CCNA_03063	0.46	+0.8
3,215,860	-		CCNA_03063	0.49	+0.3
3,215,860	-		CCNA_03063	0.49	-0.4
3,215,892	-		CCNA_03063	0.52	+0.1