Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02949

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
3,108,258	-		CCNA_02947	0.71	-2.9
3,108,276	+		CCNA_02947	0.73	-3.5
3,108,310	+		CCNA_02947	0.76	-2.0
3,108,311	+		CCNA_02947	0.76	-1.9
3,108,316	+		CCNA_02947	0.77	-2.0
3,108,316	+		CCNA_02947	0.77	-4.2
3,108,316	+				+0.0
3,108,319	-		CCNA_02947	0.77	-2.1
3,108,319	-		CCNA_02947	0.77	-1.0
3,108,324	-		CCNA_02947	0.77	-2.0
3,108,324	-		CCNA_02947	0.77	-2.2
3,108,338	+		CCNA_02947	0.79	-1.8
3,108,360	-		CCNA_02947	0.81	-2.2
3,108,366	+		CCNA_02947	0.82	-1.6
3,108,366	+		CCNA_02947	0.82	-1.5
3,108,378	+		CCNA_02947	0.83	-0.2
3,108,400	-		CCNA_02947	0.85	-1.9
3,108,426	+		CCNA_02947	0.88	-2.4
3,108,434	-		CCNA_02947	0.88	-3.9
3,108,461	+				-2.8
3,108,506	+				-1.0
3,108,530	+				-1.1
3,108,551	-				-0.8
3,108,590	+		CCNA_02948	0.13	+0.6
3,108,590	+		CCNA_02948	0.13	-1.9
3,108,590	+		CCNA_02948	0.13	-2.0
3,108,598	-		CCNA_02948	0.15	+0.2
3,108,600	+		CCNA_02948	0.15	-0.7
3,108,608	-		CCNA_02948	0.17	+0.1
3,108,613	+		CCNA_02948	0.19	+1.6
3,108,613	+		CCNA_02948	0.19	-0.8
3,108,621	-		CCNA_02948	0.21	-1.9
3,108,625	+		CCNA_02948	0.22	-0.4
3,108,651	+		CCNA_02948	0.29	-0.5
3,108,655	+		CCNA_02948	0.30	+1.1
3,108,663	-		CCNA_02948	0.33	-1.2
3,108,663	-		CCNA_02948	0.33	+0.2
3,108,752	-		CCNA_02948	0.57	-1.5
3,108,759	+		CCNA_02948	0.59	-0.1
3,108,760	+		CCNA_02948	0.59	-0.2
3,108,765	+		CCNA_02948	0.60	+0.7
3,108,831	+		CCNA_02948	0.78	-0.3
3,108,839	-		CCNA_02948	0.81	-1.1
3,108,839	-		CCNA_02948	0.81	+0.3
3,108,839	-		CCNA_02948	0.81	-2.7
3,108,878	+				+0.5
3,108,878	+				+0.6
3,108,886	-				-1.0
3,108,886	-				-0.2
3,108,903	+				-0.7
3,108,917	-				-0.7
3,108,923	+				+0.4
3,108,926	+				+0.4
3,108,952	-				-0.2
3,108,954	+				+1.1
3,108,978	-				+0.0
3,109,009	+				+0.5
3,109,010	-				-1.0
3,109,023	+				+1.3
3,109,053	-				-1.1
3,109,059	+				+0.8
3,109,067	-				+0.3
3,109,070	-				+1.1
3,109,114	-				-0.3
3,109,114	-				-0.1
3,109,114	-				+0.2
3,109,116	+				+2.3
3,109,124	-				+0.3
3,109,133	+				+1.0
3,109,133	+				+0.3
3,109,141	-				+0.1
3,109,158	-				+0.1
3,109,176	+				+1.6
3,109,185	-				-0.2
3,109,243	+				+1.0
3,109,321	-		CCNA_02949	0.12	+0.5
3,109,326	-		CCNA_02949	0.12	-0.0
3,109,398	-		CCNA_02949	0.23	+0.2
3,109,398	-		CCNA_02949	0.23	-0.2
3,109,402	+		CCNA_02949	0.24	+1.1
3,109,402	+		CCNA_02949	0.24	+1.1
3,109,402	+		CCNA_02949	0.24	+2.9
3,109,402	+		CCNA_02949	0.24	+1.8
3,109,410	-		CCNA_02949	0.25	+1.0
3,109,410	-		CCNA_02949	0.25	+0.2
3,109,415	-		CCNA_02949	0.26	+0.2
3,109,466	+		CCNA_02949	0.34	+2.0
3,109,476	+		CCNA_02949	0.35	+1.1
3,109,489	-		CCNA_02949	0.38	-0.9
3,109,491	+		CCNA_02949	0.38	+0.7
3,109,491	+		CCNA_02949	0.38	+0.4
3,109,491	+		CCNA_02949	0.38	+0.8
3,109,499	-		CCNA_02949	0.39	+0.2
3,109,505	-		CCNA_02949	0.40	+1.8
3,109,522	+		CCNA_02949	0.43	+1.0
3,109,537	-		CCNA_02949	0.45	+0.3
3,109,554	+		CCNA_02949	0.48	+1.1
3,109,566	-		CCNA_02949	0.49	+0.8
3,109,575	+		CCNA_02949	0.51	+0.5
3,109,575	+		CCNA_02949	0.51	+1.8
3,109,593	-		CCNA_02949	0.54	+0.5
3,109,642	+		CCNA_02949	0.61	+0.8
3,109,650	-		CCNA_02949	0.62	+3.1
3,109,694	-		CCNA_02949	0.69	+0.1
3,109,702	-		CCNA_02949	0.70	+1.0
3,109,717	-		CCNA_02949	0.73	-0.2
3,109,743	+		CCNA_02949	0.77	-0.8
3,109,743	+		CCNA_02949	0.77	+1.1
3,109,743	+		CCNA_02949	0.77	+1.9
3,109,743	+		CCNA_02949	0.77	-0.3
3,109,751	-		CCNA_02949	0.78	+0.8
3,109,751	-		CCNA_02949	0.78	+0.8
3,109,751	-		CCNA_02949	0.78	+0.2
3,109,796	-		CCNA_02949	0.85	-1.1
3,109,808	+		CCNA_02949	0.87	+0.4
3,109,873	-				-1.2
3,109,897	+				+0.5
3,109,926	+				+1.1
3,109,978	+				+0.7
3,109,986	-				+1.1
3,109,997	+				+0.6
3,110,004	+				+1.0
3,110,004	+				+0.9
3,110,004	+				-0.2
3,110,012	-				+0.3
3,110,017	-		CCNA_02950	0.10	-0.5
3,110,019	+		CCNA_02950	0.10	+1.4
3,110,024	+		CCNA_02950	0.11	+1.0
3,110,036	-		CCNA_02950	0.12	-1.4
3,110,099	+		CCNA_02950	0.17	+0.8
3,110,101	+		CCNA_02950	0.17	-0.0
3,110,103	-		CCNA_02950	0.17	-1.8
3,110,181	+		CCNA_02950	0.23	+1.1
3,110,184	-		CCNA_02950	0.23	-0.7
3,110,216	-		CCNA_02950	0.26	-0.5
3,110,231	-		CCNA_02950	0.27	+2.4
3,110,239	-		CCNA_02950	0.28	+0.3
3,110,306	+		CCNA_02950	0.33	-1.0
3,110,309	-		CCNA_02950	0.33	+0.9
3,110,348	-		CCNA_02950	0.36	+0.3
3,110,359	+		CCNA_02950	0.37	+0.9
3,110,373	+		CCNA_02950	0.38	+0.7
3,110,431	-		CCNA_02950	0.43	-0.1
3,110,454	+		CCNA_02950	0.45	+0.9
3,110,461	-		CCNA_02950	0.45	+0.6
3,110,461	-		CCNA_02950	0.45	-0.4
3,110,461	-		CCNA_02950	0.45	-1.6
3,110,464	-		CCNA_02950	0.45	+0.5
3,110,473	-		CCNA_02950	0.46	+0.2
3,110,475	+		CCNA_02950	0.46	+0.8
3,110,483	-		CCNA_02950	0.47	-0.2
3,110,483	-		CCNA_02950	0.47	+0.6
3,110,496	-		CCNA_02950	0.48	-1.7
3,110,553	+		CCNA_02950	0.52	+1.0
3,110,554	-		CCNA_02950	0.53	+0.6
3,110,558	+		CCNA_02950	0.53	+1.0
3,110,566	-		CCNA_02950	0.54	+1.5
3,110,582	+		CCNA_02950	0.55	+1.5
3,110,669	+		CCNA_02950	0.62	+0.9
3,110,669	+		CCNA_02950	0.62	+0.4
3,110,669	+		CCNA_02950	0.62	+0.7
3,110,669	+		CCNA_02950	0.62	+0.2
3,110,669	+		CCNA_02950	0.62	+1.0
3,110,669	+		CCNA_02950	0.62	+0.7
3,110,669	+		CCNA_02950	0.62	-0.0
3,110,669	+		CCNA_02950	0.62	+1.3
3,110,677	-		CCNA_02950	0.62	+1.3
3,110,677	-		CCNA_02950	0.62	+3.2
3,110,687	+		CCNA_02950	0.63	+1.0
3,110,725	+		CCNA_02950	0.66	+0.6
3,110,736	+		CCNA_02950	0.67	-0.4
3,110,758	+		CCNA_02950	0.69	+0.3
3,110,761	-		CCNA_02950	0.69	+1.9
3,110,769	+		CCNA_02950	0.70	-0.1
3,110,777	-		CCNA_02950	0.70	+0.0
3,110,779	+		CCNA_02950	0.70	-0.0
3,110,789	+		CCNA_02950	0.71	-0.1
3,110,805	+		CCNA_02950	0.72	-0.2
3,110,809	+		CCNA_02950	0.73	+0.1
3,110,809	+		CCNA_02950	0.73	-1.1
3,110,809	+		CCNA_02950	0.73	-0.3
3,110,809	+		CCNA_02950	0.73	-0.2
3,110,817	-		CCNA_02950	0.73	+0.1
3,110,827	+		CCNA_02950	0.74	+0.3
3,110,833	+		CCNA_02950	0.75	-2.2
3,110,851	-		CCNA_02950	0.76	+1.3
3,110,851	-		CCNA_02950	0.76	+2.6