Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02619

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
2,766,239	+		CCNA_02617	0.79	+1.4
2,766,239	+		CCNA_02617	0.79	+1.4
2,766,239	+		CCNA_02617	0.79	+0.8
2,766,244	+		CCNA_02617	0.79	+2.4
2,766,247	-		CCNA_02617	0.79	-1.6
2,766,247	-		CCNA_02617	0.79	-1.3
2,766,247	-		CCNA_02617	0.79	-1.7
2,766,247	-		CCNA_02617	0.79	-1.4
2,766,247	-		CCNA_02617	0.79	-0.9
2,766,266	+		CCNA_02617	0.81	-0.4
2,766,293	-		CCNA_02617	0.83	-2.6
2,766,322	-		CCNA_02617	0.86	-2.4
2,766,324	+		CCNA_02617	0.86	+0.4
2,766,324	+		CCNA_02617	0.86	+2.4
2,766,332	-		CCNA_02617	0.87	+0.8
2,766,332	-		CCNA_02617	0.87	-2.3
2,766,337	+		CCNA_02617	0.87	+2.4
2,766,343	-		CCNA_02617	0.88	-1.9
2,766,345	-		CCNA_02617	0.88	-1.9
2,766,345	-		CCNA_02617	0.88	-2.8
2,766,345	-		CCNA_02617	0.88	-2.4
2,766,345	-		CCNA_02617	0.88	-2.9
2,766,364	+		CCNA_02617	0.90	+2.4
2,766,369	+				+0.8
2,766,377	-				-2.7
2,766,408	-				-3.6
2,766,427	-				-2.0
2,766,444	-				-3.0
2,766,573	+				-0.3
2,766,721	-		CCNA_02618	0.26	-1.7
2,766,730	-		CCNA_02618	0.28	-3.2
2,766,740	-		CCNA_02618	0.30	-1.1
2,766,809	-		CCNA_02618	0.44	-2.3
2,766,815	+		CCNA_02618	0.46	-1.1
2,766,823	+		CCNA_02618	0.47	-2.2
2,766,843	+		CCNA_02618	0.52	-0.2
2,766,852	+		CCNA_02618	0.54	-0.2
2,766,860	+		CCNA_02618	0.55	-0.8
2,766,865	+		CCNA_02618	0.56	-2.1
2,766,873	-		CCNA_02618	0.58	-1.4
2,766,873	-		CCNA_02618	0.58	-1.7
2,766,873	-		CCNA_02618	0.58	-2.8
2,766,878	-		CCNA_02618	0.59	-1.9
2,766,897	-		CCNA_02618	0.63	+0.5
2,766,924	+		CCNA_02618	0.69	+0.1
2,766,924	+		CCNA_02618	0.69	+2.4
2,766,929	+		CCNA_02618	0.70	+0.1
2,766,932	-		CCNA_02618	0.70	-1.4
2,766,932	-		CCNA_02618	0.70	-2.1
2,766,932	-		CCNA_02618	0.70	-1.2
2,766,937	-		CCNA_02618	0.72	-1.0
2,766,947	+		CCNA_02618	0.74	-0.6
2,766,970	-		CCNA_02618	0.79	-1.4
2,766,970	-		CCNA_02618	0.79	-1.3
2,766,979	+		CCNA_02618	0.80	-0.1
2,766,988	+		CCNA_02618	0.82	+0.8
2,766,998	+		CCNA_02618	0.85	-1.7
2,767,062	-				-1.5
2,767,164	+				-0.8
2,767,172	-				+0.3
2,767,209	+				+1.0
2,767,276	-				-0.0
2,767,282	-				+1.9
2,767,282	-				+1.5
2,767,287	+				+1.2
2,767,295	-				+0.7
2,767,332	-		CCNA_02619	0.14	+0.8
2,767,342	+		CCNA_02619	0.15	+1.2
2,767,346	+		CCNA_02619	0.15	+1.8
2,767,349	-		CCNA_02619	0.16	+0.3
2,767,359	+		CCNA_02619	0.17	+1.8
2,767,364	+		CCNA_02619	0.17	+1.3
2,767,398	-		CCNA_02619	0.21	+1.3
2,767,398	-		CCNA_02619	0.21	+0.0
2,767,409	+		CCNA_02619	0.22	+1.8
2,767,422	-		CCNA_02619	0.24	+0.1
2,767,435	+		CCNA_02619	0.25	+1.4
2,767,435	+		CCNA_02619	0.25	+1.0
2,767,450	+		CCNA_02619	0.27	+1.7
2,767,450	+		CCNA_02619	0.27	+1.5
2,767,450	+		CCNA_02619	0.27	+1.3
2,767,456	-		CCNA_02619	0.28	+1.6
2,767,458	-		CCNA_02619	0.28	+1.0
2,767,472	+		CCNA_02619	0.29	+1.3
2,767,492	+		CCNA_02619	0.32	+1.6
2,767,492	+		CCNA_02619	0.32	+1.7
2,767,492	+		CCNA_02619	0.32	+1.2
2,767,492	+		CCNA_02619	0.32	+1.5
2,767,495	-		CCNA_02619	0.32	+1.4
2,767,499	-		CCNA_02619	0.32	+1.3
2,767,500	-		CCNA_02619	0.32	+1.9
2,767,500	-		CCNA_02619	0.32	+1.3
2,767,500	-		CCNA_02619	0.32	+0.7
2,767,500	-		CCNA_02619	0.32	+0.6
2,767,500	-		CCNA_02619	0.32	+1.1
2,767,505	-		CCNA_02619	0.33	+0.4
2,767,520	+		CCNA_02619	0.35	+1.6
2,767,586	+		CCNA_02619	0.42	+1.6
2,767,609	-		CCNA_02619	0.44	+0.7
2,767,617	+		CCNA_02619	0.45	+1.6
2,767,624	+		CCNA_02619	0.46	+2.0
2,767,625	+		CCNA_02619	0.46	+1.8
2,767,628	+		CCNA_02619	0.47	+2.1
2,767,733	-		CCNA_02619	0.58	+0.9
2,767,734	+		CCNA_02619	0.58	+1.6
2,767,741	-		CCNA_02619	0.59	+0.1
2,767,769	+		CCNA_02619	0.62	+1.8
2,767,770	+		CCNA_02619	0.62	+1.6
2,767,770	+		CCNA_02619	0.62	+1.5
2,767,770	+		CCNA_02619	0.62	+1.7
2,767,770	+		CCNA_02619	0.62	+1.9
2,767,770	+		CCNA_02619	0.62	+2.0
2,767,770	+		CCNA_02619	0.62	+1.7
2,767,770	+		CCNA_02619	0.62	+1.7
2,767,777	-		CCNA_02619	0.63	-1.2
2,767,778	-		CCNA_02619	0.63	+1.3
2,767,778	-		CCNA_02619	0.63	-0.1
2,767,778	-		CCNA_02619	0.63	+0.4
2,767,778	-		CCNA_02619	0.63	+0.6
2,767,831	+		CCNA_02619	0.69	+2.0
2,767,857	-		CCNA_02619	0.72	-1.0
2,767,871	+		CCNA_02619	0.73	+1.4
2,767,871	+		CCNA_02619	0.73	+2.0
2,767,877	+		CCNA_02619	0.74	+1.3
2,767,877	+		CCNA_02619	0.74	+1.5
2,767,885	-		CCNA_02619	0.75	+0.1
2,767,885	-		CCNA_02619	0.75	+0.4
2,767,885	-		CCNA_02619	0.75	+0.1
2,767,938	+		CCNA_02619	0.81	+1.5
2,767,943	+		CCNA_02619	0.81	+1.9
2,767,946	-		CCNA_02619	0.82	+0.9
2,767,964	+		CCNA_02619	0.84	+1.8
2,767,991	+		CCNA_02619	0.87	+1.5
2,768,065	+				+1.2
2,768,078	-				-1.0
2,768,142	+				+0.6
2,768,243	+		CCNA_02620	0.18	-0.4
2,768,272	+		CCNA_02620	0.28	+0.0
2,768,285	-		CCNA_02620	0.33	-0.4
2,768,359	+		CCNA_02620	0.58	-1.2
2,768,389	-		CCNA_02620	0.68	+1.6
2,768,409	+		CCNA_02620	0.75	-2.7
2,768,426	-		CCNA_02620	0.81	-0.2
2,768,475	+				-0.3
2,768,483	-				-2.1
2,768,492	+				-0.3
2,768,500	-				-2.1
2,768,500	-				-0.6
2,768,600	-				-1.9
2,768,604	+				-2.4
2,768,612	-				-0.6
2,768,621	-				-0.6
2,768,623	+				+1.2
2,768,636	-				+0.7
2,768,636	-				-0.6
2,768,637	+				-1.2
2,768,683	-				+0.4
2,768,688	-				+0.1
2,768,799	+		CCNA_02621	0.21	-0.5
2,768,807	-		CCNA_02621	0.22	-2.5
2,768,827	+		CCNA_02621	0.24	-0.8
2,768,835	-		CCNA_02621	0.25	-1.0
2,768,835	-		CCNA_02621	0.25	-2.3
2,768,836	-		CCNA_02621	0.25	+0.8
2,768,909	-		CCNA_02621	0.33	+0.3
2,768,945	+		CCNA_02621	0.36	+0.3
2,768,950	+		CCNA_02621	0.37	-0.4
2,768,958	-		CCNA_02621	0.38	+0.4
2,768,997	-		CCNA_02621	0.42	-1.3
2,769,014	-		CCNA_02621	0.44	-0.2
2,769,027	+		CCNA_02621	0.45	+0.3
2,769,035	-		CCNA_02621	0.46	-1.4
2,769,063	+		CCNA_02621	0.49	-0.8
2,769,066	-		CCNA_02621	0.49	-0.4
2,769,071	-		CCNA_02621	0.50	+0.1
2,769,107	+		CCNA_02621	0.54	-0.6