Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02448

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
2,588,141	-		CCNA_02446	0.84	+0.1
2,588,143	+		CCNA_02446	0.84	-0.3
2,588,143	+		CCNA_02446	0.84	+1.4
2,588,143	+		CCNA_02446	0.84	-0.7
2,588,143	+		CCNA_02446	0.84	+2.4
2,588,143	+		CCNA_02446	0.84	+0.4
2,588,143	+		CCNA_02446	0.84	+0.1
2,588,143	+		CCNA_02446	0.84	+1.4
2,588,143	+		CCNA_02446	0.84	+0.6
2,588,143	+		CCNA_02446	0.84	-0.7
2,588,143	+		CCNA_02446	0.84	+1.1
2,588,143	+		CCNA_02446	0.84	+0.1
2,588,143	+		CCNA_02446	0.84	+2.4
2,588,143	+		CCNA_02446	0.84	+0.4
2,588,143	+		CCNA_02446	0.84	-0.2
2,588,151	-		CCNA_02446	0.85	-0.2
2,588,151	-		CCNA_02446	0.85	-0.7
2,588,151	-		CCNA_02446	0.85	-0.1
2,588,151	-		CCNA_02446	0.85	-0.3
2,588,151	-		CCNA_02446	0.85	-2.3
2,588,151	-		CCNA_02446	0.85	-2.3
2,588,151	-		CCNA_02446	0.85	-0.6
2,588,151	-		CCNA_02446	0.85	-0.0
2,588,151	-		CCNA_02446	0.85	-0.6
2,588,151	-		CCNA_02446	0.85	-1.1
2,588,151	-		CCNA_02446	0.85	-0.3
2,588,151	-		CCNA_02446	0.85	-0.3
2,588,151	-		CCNA_02446	0.85	-0.3
2,588,151	-		CCNA_02446	0.85	-1.2
2,588,151	-		CCNA_02446	0.85	-0.9
2,588,151	-		CCNA_02446	0.85	-0.6
2,588,151	-		CCNA_02446	0.85	-1.0
2,588,151	-		CCNA_02446	0.85	-0.6
2,588,151	-		CCNA_02446	0.85	-1.5
2,588,151	-		CCNA_02446	0.85	-1.8
2,588,151	-		CCNA_02446	0.85	+0.3
2,588,151	-		CCNA_02446	0.85	+0.9
2,588,151	-		CCNA_02446	0.85	-0.9
2,588,151	-		CCNA_02446	0.85	-0.4
2,588,151	-		CCNA_02446	0.85	+0.1
2,588,151	-		CCNA_02446	0.85	-0.9
2,588,151	-		CCNA_02446	0.85	-0.7
2,588,151	-		CCNA_02446	0.85	-0.4
2,588,151	-		CCNA_02446	0.85	-2.6
2,588,156	-		CCNA_02446	0.85	-2.7
2,588,159	+		CCNA_02446	0.85	+0.4
2,588,189	+		CCNA_02446	0.88	+0.1
2,588,190	+		CCNA_02446	0.88	-0.6
2,588,198	-		CCNA_02446	0.89	+0.3
2,588,221	-				+1.0
2,588,240	-				-0.8
2,588,263	+				+0.4
2,588,298	-				-0.2
2,588,355	+				+1.9
2,588,382	-				+0.7
2,588,411	+		CCNA_02447	0.11	-0.7
2,588,411	+		CCNA_02447	0.11	+0.5
2,588,495	-		CCNA_02447	0.22	+0.8
2,588,508	+		CCNA_02447	0.24	+0.5
2,588,508	+		CCNA_02447	0.24	+0.7
2,588,508	+		CCNA_02447	0.24	+0.7
2,588,516	-		CCNA_02447	0.25	+1.3
2,588,516	-		CCNA_02447	0.25	+1.4
2,588,516	-		CCNA_02447	0.25	+1.5
2,588,525	+		CCNA_02447	0.26	+0.4
2,588,526	+		CCNA_02447	0.26	-0.9
2,588,538	-		CCNA_02447	0.28	+0.3
2,588,543	-		CCNA_02447	0.28	+1.7
2,588,557	-		CCNA_02447	0.30	+0.5
2,588,559	+		CCNA_02447	0.30	+1.0
2,588,567	-		CCNA_02447	0.31	+1.6
2,588,569	+		CCNA_02447	0.32	+1.6
2,588,576	-		CCNA_02447	0.33	+0.9
2,588,605	+		CCNA_02447	0.36	-0.3
2,588,613	-		CCNA_02447	0.37	+0.6
2,588,613	-		CCNA_02447	0.37	+0.8
2,588,634	+		CCNA_02447	0.40	+1.2
2,588,640	+		CCNA_02447	0.41	+0.5
2,588,640	-		CCNA_02447	0.41	+0.9
2,588,690	+		CCNA_02447	0.48	+0.3
2,588,690	+		CCNA_02447	0.48	+0.8
2,588,690	+		CCNA_02447	0.48	-0.6
2,588,698	-		CCNA_02447	0.49	+0.8
2,588,704	-		CCNA_02447	0.49	+0.7
2,588,707	+		CCNA_02447	0.50	+0.9
2,588,710	-		CCNA_02447	0.50	+1.1
2,588,738	-		CCNA_02447	0.54	+1.7
2,588,778	-		CCNA_02447	0.59	+0.5
2,588,798	+				+1.4
2,588,798	+		CCNA_02447	0.62	+0.7
2,588,798	+		CCNA_02447	0.62	+0.8
2,588,798	+		CCNA_02447	0.62	+0.1
2,588,798	+		CCNA_02447	0.62	+0.0
2,588,806	-		CCNA_02447	0.63	+1.8
2,588,816	-		CCNA_02447	0.64	+1.4
2,588,837	+		CCNA_02447	0.67	+0.6
2,588,837	+		CCNA_02447	0.67	+0.2
2,588,845	-		CCNA_02447	0.68	+1.3
2,588,857	+		CCNA_02447	0.70	+0.4
2,588,863	+		CCNA_02447	0.70	+0.3
2,588,865	-		CCNA_02447	0.71	+0.2
2,588,871	-		CCNA_02447	0.71	+0.7
2,588,900	+		CCNA_02447	0.75	-0.1
2,588,933	+		CCNA_02447	0.80	+0.5
2,588,948	+		CCNA_02447	0.82	+3.0
2,588,954	+		CCNA_02447	0.82	+0.9
2,588,956	-		CCNA_02447	0.83	+1.4
2,588,959	+		CCNA_02447	0.83	+0.5
2,588,988	+		CCNA_02447	0.87	-0.7
2,589,008	+		CCNA_02447	0.89	+1.7
2,589,008	+		CCNA_02447	0.89	+0.1
2,589,009	-		CCNA_02447	0.90	+1.0
2,589,018	+				+0.0
2,589,025	+				+1.3
2,589,037	+				+0.4
2,589,037	+				+0.8
2,589,037	+				+0.1
2,589,037	+				+0.8
2,589,045	-				+1.2
2,589,045	-				+1.3
2,589,045	-				+0.9
2,589,045	-				+1.2
2,589,045	-				+1.5
2,589,045	-				+1.3
2,589,050	+				+2.2
2,589,050	+				+0.4
2,589,050	+				+1.3
2,589,050	+				-0.2
2,589,063	-				+1.1
2,589,069	-				+1.6
2,589,070	-				+1.3
2,589,070	-				+1.0
2,589,085	+				+0.6
2,589,115	-				+0.6
2,589,115	-				+0.9
2,589,166	+				+0.0
2,589,171	+				+0.9
2,589,202	-		CCNA_02448	0.14	+1.9
2,589,231	+		CCNA_02448	0.18	+1.2
2,589,245	+		CCNA_02448	0.20	-0.9
2,589,248	-		CCNA_02448	0.20	+1.2
2,589,253	-		CCNA_02448	0.21	+2.1
2,589,277	+		CCNA_02448	0.25	+1.7
2,589,303	+		CCNA_02448	0.29	+0.4
2,589,311	-		CCNA_02448	0.30	+1.8
2,589,318	-		CCNA_02448	0.31	+1.7
2,589,348	-		CCNA_02448	0.35	+1.5
2,589,350	+		CCNA_02448	0.36	-0.9
2,589,360	+		CCNA_02448	0.37	+2.9
2,589,361	+		CCNA_02448	0.37	+0.7
2,589,361	-		CCNA_02448	0.37	+2.0
2,589,374	-		CCNA_02448	0.39	+1.4
2,589,394	-		CCNA_02448	0.42	+2.1
2,589,444	+		CCNA_02448	0.50	+1.0
2,589,454	+		CCNA_02448	0.51	-0.2
2,589,473	-		CCNA_02448	0.54	+1.6
2,589,473	-		CCNA_02448	0.54	+1.5
2,589,483	+		CCNA_02448	0.55	+0.4
2,589,508	+		CCNA_02448	0.59	+1.0
2,589,520	-		CCNA_02448	0.61	+2.0
2,589,530	+		CCNA_02448	0.62	+0.9
2,589,530	+		CCNA_02448	0.62	+1.7
2,589,530	+		CCNA_02448	0.62	+2.4
2,589,530	+		CCNA_02448	0.62	+1.5
2,589,531	+		CCNA_02448	0.62	+1.0
2,589,531	+		CCNA_02448	0.62	+0.7
2,589,531	+		CCNA_02448	0.62	+0.8
2,589,531	+		CCNA_02448	0.62	+0.6
2,589,532	+		CCNA_02448	0.63	+0.6
2,589,539	-		CCNA_02448	0.64	+1.7
2,589,539	-		CCNA_02448	0.64	+1.2
2,589,562	-		CCNA_02448	0.67	+1.8
2,589,570	+		CCNA_02448	0.68	+0.8
2,589,570	-		CCNA_02448	0.68	+1.8
2,589,582	+		CCNA_02448	0.70	+0.5
2,589,588	-		CCNA_02448	0.71	+2.1
2,589,588	-		CCNA_02448	0.71	+2.1
2,589,588	-		CCNA_02448	0.71	+2.2
2,589,591	+		CCNA_02448	0.71	+1.4
2,589,595	+		CCNA_02448	0.72	+0.9
2,589,600	+		CCNA_02448	0.73	+1.3
2,589,600	+		CCNA_02448	0.73	+0.9
2,589,603	-		CCNA_02448	0.73	+1.7
2,589,616	-		CCNA_02448	0.75	+1.3
2,589,629	-		CCNA_02448	0.77	+2.1
2,589,634	+		CCNA_02448	0.78	+1.0
2,589,634	+		CCNA_02448	0.78	+0.9
2,589,639	+		CCNA_02448	0.79	+0.6
2,589,639	+		CCNA_02448	0.79	+0.7
2,589,639	+		CCNA_02448	0.79	+1.7
2,589,647	-		CCNA_02448	0.80	+1.8
2,589,647	-		CCNA_02448	0.80	+1.6
2,589,647	-		CCNA_02448	0.80	+2.0
2,589,647	-		CCNA_02448	0.80	+1.8
2,589,647	-		CCNA_02448	0.80	+1.9
2,589,664	+		CCNA_02448	0.82	+0.9
2,589,664	+		CCNA_02448	0.82	+1.0
2,589,672	-		CCNA_02448	0.83	+1.3
2,589,674	+		CCNA_02448	0.84	+1.8
2,589,695	-		CCNA_02448	0.87	+1.8
2,589,762	+				+0.7
2,589,829	+				+0.1
2,589,853	-				-1.2
2,589,913	+				-0.8
2,589,915	+				+1.4
2,589,982	+				+0.8
2,589,990	-				+1.4
2,590,027	-		CCNA_02449	0.15	-0.4
2,590,058	-		CCNA_02449	0.19	+1.4
2,590,108	+		CCNA_02449	0.27	+0.4
2,590,117	-		CCNA_02449	0.28	+2.4
2,590,117	-		CCNA_02449	0.28	+2.4
2,590,154	-		CCNA_02449	0.34	+1.4
2,590,154	-		CCNA_02449	0.34	+0.8
2,590,253	-		CCNA_02449	0.49	+1.4
2,590,310	-		CCNA_02449	0.58	+2.4
2,590,310	-		CCNA_02449	0.58	+2.4
2,590,341	-		CCNA_02449	0.63	+2.4
2,590,382	+		CCNA_02449	0.69	+0.8
2,590,387	+		CCNA_02449	0.70	-0.7
2,590,390	-		CCNA_02449	0.70	-1.3
2,590,397	-		CCNA_02449	0.71	+0.8
2,590,426	+		CCNA_02449	0.76	-0.4
2,590,439	+		CCNA_02449	0.78	+0.1
2,590,439	+		CCNA_02449	0.78	-0.5
2,590,444	+		CCNA_02449	0.78	-2.1
2,590,447	-		CCNA_02449	0.79	+1.4
2,590,449	+		CCNA_02449	0.79	-0.4
2,590,454	+		CCNA_02449	0.80	-2.8
2,590,461	-		CCNA_02449	0.81	+2.4
2,590,527	+				-0.9
2,590,560	+				+0.3
2,590,572	+				+0.4
2,590,580	-				+2.4
2,590,580	-				+2.4
2,590,617	-				+0.1
2,590,708	+				+0.8
2,590,723	-				+0.4
2,590,743	+				-1.3
2,590,743	+				+1.4
2,590,761	+				+0.1
2,590,768	+				+0.8