Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01917

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
2,058,990	+		CCNA_01916	0.13	+0.9
2,058,990	+		CCNA_01916	0.13	+0.4
2,058,998	-		CCNA_01916	0.14	-2.6
2,059,069	-		CCNA_01916	0.21	+0.2
2,059,137	-		CCNA_01916	0.28	+0.2
2,059,167	+		CCNA_01916	0.31	+2.4
2,059,167	+		CCNA_01916	0.31	+0.9
2,059,175	-		CCNA_01916	0.32	+0.3
2,059,212	+		CCNA_01916	0.36	+0.4
2,059,239	-		CCNA_01916	0.38	-2.3
2,059,239	-		CCNA_01916	0.38	-1.8
2,059,239	-		CCNA_01916	0.38	-1.4
2,059,242	+		CCNA_01916	0.39	+2.4
2,059,277	-		CCNA_01916	0.42	+0.5
2,059,277	-		CCNA_01916	0.42	+0.3
2,059,280	-				+1.2
2,059,290	+		CCNA_01916	0.44	-0.1
2,059,311	+		CCNA_01916	0.46	+0.4
2,059,311	+		CCNA_01916	0.46	+2.4
2,059,319	-		CCNA_01916	0.47	-0.6
2,059,319	-		CCNA_01916	0.47	+1.7
2,059,346	-		CCNA_01916	0.49	+0.6
2,059,374	-		CCNA_01916	0.52	-0.6
2,059,396	+		CCNA_01916	0.54	-0.1
2,059,460	-		CCNA_01916	0.61	-0.6
2,059,472	+		CCNA_01916	0.62	-0.1
2,059,480	-		CCNA_01916	0.63	+1.8
2,059,487	+		CCNA_01916	0.64	+0.9
2,059,505	+		CCNA_01916	0.65	-0.1
2,059,505	+		CCNA_01916	0.65	+1.1
2,059,513	-		CCNA_01916	0.66	-0.7
2,059,513	-		CCNA_01916	0.66	+0.1
2,059,518	+				+1.4
2,059,520	-		CCNA_01916	0.67	-0.2
2,059,526	-		CCNA_01916	0.67	+0.4
2,059,591	+		CCNA_01916	0.74	+0.4
2,059,599	+		CCNA_01916	0.75	+0.1
2,059,636	+		CCNA_01916	0.79	+1.4
2,059,644	-		CCNA_01916	0.79	-0.1
2,059,685	+		CCNA_01916	0.84	-1.4
2,059,693	-		CCNA_01916	0.84	+0.3
2,059,724	+		CCNA_01916	0.88	-1.1
2,059,725	-		CCNA_01916	0.88	-0.2
2,059,757	+				-1.6
2,059,768	+				+0.9
2,059,768	+				+0.9
2,059,770	-				-0.1
2,059,770	-				-0.1
2,059,770	-				+1.0
2,059,778	+				-2.3
2,059,825	-				+0.2
2,059,825	-				+0.6
2,059,832	+				+1.4
2,059,840	-				+0.9
2,059,878	+				+0.9
2,059,898	-				-0.1
2,059,915	-				+1.3
2,059,923	-				-0.1
2,059,951	+				-1.5
2,059,963	+				+1.4
2,059,965	+				+0.1
2,059,974	+				+0.9
2,059,976	+				-1.5
2,059,987	-				+0.3
2,060,003	+				-1.1
2,060,003	+				-0.4
2,060,005	-				+0.0
2,060,011	-				+1.3
2,060,011	-				+0.1
2,060,028	+				-1.6
2,060,159	-		CCNA_01917	0.15	-1.9
2,060,161	+		CCNA_01917	0.15	-0.6
2,060,162	-		CCNA_01917	0.16	-1.3
2,060,169	-		CCNA_01917	0.16	-1.4
2,060,169	-		CCNA_01917	0.16	-3.1
2,060,169	-		CCNA_01917	0.16	-4.9
2,060,169	-		CCNA_01917	0.16	+0.4
2,060,182	-		CCNA_01917	0.17	-1.8
2,060,206	+		CCNA_01917	0.19	-1.6
2,060,211	+		CCNA_01917	0.20	-1.8
2,060,214	-		CCNA_01917	0.20	-1.7
2,060,219	-		CCNA_01917	0.21	+0.1
2,060,219	-		CCNA_01917	0.21	+0.9
2,060,229	+		CCNA_01917	0.21	-0.6
2,060,237	-		CCNA_01917	0.22	-1.6
2,060,237	-		CCNA_01917	0.22	-3.4
2,060,269	-		CCNA_01917	0.25	-1.1
2,060,275	-		CCNA_01917	0.26	-1.6
2,060,300	-		CCNA_01917	0.28	-0.6
2,060,324	-		CCNA_01917	0.30	+0.4
2,060,332	+		CCNA_01917	0.31	+0.9
2,060,381	-		CCNA_01917	0.35	+0.1
2,060,386	-		CCNA_01917	0.35	+2.4
2,060,386	-		CCNA_01917	0.35	-1.1
2,060,414	+		CCNA_01917	0.38	+1.4
2,060,441	+		CCNA_01917	0.40	+1.4
2,060,441	+		CCNA_01917	0.40	+1.4
2,060,441	+		CCNA_01917	0.40	+0.4
2,060,467	-		CCNA_01917	0.43	-1.3
2,060,496	+		CCNA_01917	0.45	-2.3
2,060,513	-		CCNA_01917	0.47	-1.5
2,060,518	+		CCNA_01917	0.47	+0.1
2,060,538	-				+0.4
2,060,603	-		CCNA_01917	0.55	-0.9
2,060,604	-		CCNA_01917	0.55	-1.0
2,060,621	+		CCNA_01917	0.56	+0.4
2,060,667	-		CCNA_01917	0.60	-3.2
2,060,718	-		CCNA_01917	0.65	+0.4
2,060,766	+		CCNA_01917	0.69	-2.1
2,060,769	-		CCNA_01917	0.69	-1.7
2,060,774	-		CCNA_01917	0.70	-0.6
2,060,774	-		CCNA_01917	0.70	-1.6
2,060,774	-		CCNA_01917	0.70	-1.0
2,060,774	-		CCNA_01917	0.70	-3.3
2,060,795	+		CCNA_01917	0.72	-2.6
2,060,795	+		CCNA_01917	0.72	-4.5
2,060,795	+		CCNA_01917	0.72	-3.5
2,060,796	+		CCNA_01917	0.72	-1.1
2,060,827	-		CCNA_01917	0.74	-3.4
2,060,840	-		CCNA_01917	0.76	-0.1
2,060,903	-		CCNA_01917	0.81	-0.9
2,060,903	-		CCNA_01917	0.81	+1.4
2,060,903	-		CCNA_01917	0.81	+0.1
2,060,925	+		CCNA_01917	0.83	+1.4
2,060,973	-		CCNA_01917	0.87	-2.8
2,060,986	+		CCNA_01917	0.89	+0.1
2,060,994	-		CCNA_01917	0.89	-2.8
2,060,994	-		CCNA_01917	0.89	-0.9
2,060,994	-		CCNA_01917	0.89	-2.6
2,061,015	-				+2.4
2,061,022	+				+0.9
2,061,036	+				+1.4
2,061,102	+				-1.0
2,061,135	+				-0.9
2,061,136	+				-0.6
2,061,136	+				-1.0
2,061,144	-				+0.3
2,061,179	-				-0.0
2,061,204	+				+1.0
2,061,235	-				-1.1
2,061,243	-				-0.4
2,061,258	-				-1.2
2,061,260	+				+0.9
2,061,268	-				-1.0
2,061,272	+				-0.4
2,061,298	+				+0.6
2,061,309	+				+0.3
2,061,317	-				-0.1
2,061,409	+				+1.3
2,061,417	-				+0.1
2,061,469	+				+0.7
2,061,477	-		CCNA_01918	0.10	-1.9
2,061,510	+		CCNA_01918	0.13	+1.2
2,061,510	+		CCNA_01918	0.13	+1.3
2,061,600	+		CCNA_01918	0.19	+1.4
2,061,632	+		CCNA_01918	0.22	+1.5
2,061,642	+		CCNA_01918	0.23	+1.2
2,061,642	+		CCNA_01918	0.23	+1.5
2,061,642	+		CCNA_01918	0.23	+1.0
2,061,649	+		CCNA_01918	0.23	+1.5
2,061,650	-		CCNA_01918	0.23	+1.9
2,061,650	-		CCNA_01918	0.23	-0.6
2,061,657	-		CCNA_01918	0.24	+0.2
2,061,657	-		CCNA_01918	0.24	+1.4
2,061,766	-		CCNA_01918	0.32	-1.3
2,061,768	+		CCNA_01918	0.32	+0.9
2,061,783	-		CCNA_01918	0.33	-1.0
2,061,837	+		CCNA_01918	0.37	+1.7
2,061,837	+		CCNA_01918	0.37	+1.1
2,061,837	+		CCNA_01918	0.37	+1.2
2,061,837	+		CCNA_01918	0.37	+0.8
2,061,845	-		CCNA_01918	0.38	+0.5
2,061,845	-		CCNA_01918	0.38	-1.1
2,061,845	-		CCNA_01918	0.38	-0.5
2,061,873	-		CCNA_01918	0.40	+0.1
2,061,939	-		CCNA_01918	0.45	-2.8
2,061,985	-		CCNA_01918	0.48	-2.3
2,062,013	+		CCNA_01918	0.51	+1.4
2,062,023	+		CCNA_01918	0.51	+1.4
2,062,023	+		CCNA_01918	0.51	+1.3
2,062,028	+		CCNA_01918	0.52	+1.5
2,062,031	-		CCNA_01918	0.52	+0.1
2,062,031	-		CCNA_01918	0.52	-1.9
2,062,080	+		CCNA_01918	0.56	+1.1
2,062,113	-		CCNA_01918	0.58	-0.9