Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01914

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
2,056,028	-				+0.4
2,056,040	+				+0.1
2,056,040	+				+2.4
2,056,040	+				+2.4
2,056,048	-				-1.6
2,056,050	+				-0.3
2,056,050	+				-1.1
2,056,053	-				-0.7
2,056,097	-				+0.4
2,056,109	-				-1.3
2,056,126	+				+0.9
2,056,134	-				-0.0
2,056,134	-				-1.1
2,056,134	-				-0.8
2,056,134	-				-0.7
2,056,136	+				+2.4
2,056,136	+				+1.4
2,056,136	+				+0.9
2,056,151	+				+1.4
2,056,218	-		CCNA_01912	0.28	-1.1
2,056,225	+		CCNA_01912	0.30	+0.9
2,056,330	-		CCNA_01912	0.63	+0.1
2,056,331	-		CCNA_01912	0.63	+1.1
2,056,341	+		CCNA_01912	0.66	-0.4
2,056,344	-		CCNA_01912	0.67	-2.2
2,056,349	-		CCNA_01912	0.69	-1.1
2,056,362	-		CCNA_01912	0.73	-0.9
2,056,364	-		CCNA_01912	0.73	+0.9
2,056,376	+		CCNA_01912	0.77	+2.0
2,056,376	+		CCNA_01912	0.77	-0.1
2,056,390	+		CCNA_01912	0.81	-0.9
2,056,390	+		CCNA_01912	0.81	-2.0
2,056,390	+		CCNA_01912	0.81	+2.4
2,056,398	-		CCNA_01912	0.84	+0.3
2,056,500	-				-1.9
2,056,559	+				+0.6
2,056,560	+				+0.9
2,056,567	-				-0.1
2,056,638	+		CCNA_01913	0.25	+0.8
2,056,643	+		CCNA_01913	0.27	+0.6
2,056,662	+		CCNA_01913	0.31	+1.1
2,056,679	+		CCNA_01913	0.36	+1.1
2,056,706	+		CCNA_01913	0.43	+0.8
2,056,708	+		CCNA_01913	0.44	+1.1
2,056,708	+		CCNA_01913	0.44	+0.8
2,056,709	-		CCNA_01913	0.44	+2.4
2,056,733	+		CCNA_01913	0.50	+0.8
2,056,733	+		CCNA_01913	0.50	+0.7
2,056,759	+		CCNA_01913	0.57	-0.8
2,056,759	+		CCNA_01913	0.57	+1.7
2,056,797	+		CCNA_01913	0.67	+0.8
2,056,797	+		CCNA_01913	0.67	+1.1
2,056,797	+		CCNA_01913	0.67	+0.8
2,056,800	-		CCNA_01913	0.68	+2.4
2,056,811	+		CCNA_01913	0.71	+0.7
2,056,821	+		CCNA_01913	0.73	+1.2
2,056,831	+		CCNA_01913	0.76	+0.9
2,056,839	-		CCNA_01913	0.78	+0.1
2,056,839	-		CCNA_01913	0.78	+2.4
2,056,856	+		CCNA_01913	0.82	+0.9
2,056,856	+		CCNA_01913	0.82	+0.9
2,056,856	+		CCNA_01913	0.82	+0.8
2,056,856	+		CCNA_01913	0.82	+1.1
2,056,856	+		CCNA_01913	0.82	+1.0
2,056,864	-		CCNA_01913	0.85	+2.4
2,056,864	-		CCNA_01913	0.85	+0.9
2,056,895	-				+1.4
2,056,941	+				+0.3
2,056,968	+				-0.5
2,057,002	+				-0.4
2,057,017	-				+2.4
2,057,038	+				+1.4
2,057,038	+				+0.7
2,057,045	-				+1.1
2,057,076	+				+2.7
2,057,092	-				-1.3
2,057,103	+				+2.1
2,057,114	+		CCNA_01914	0.11	+3.1
2,057,119	+		CCNA_01914	0.11	+2.1
2,057,127	-		CCNA_01914	0.12	+2.7
2,057,129	-		CCNA_01914	0.12	+2.4
2,057,223	+		CCNA_01914	0.23	+1.8
2,057,235	+		CCNA_01914	0.24	+1.3
2,057,245	+		CCNA_01914	0.25	+2.6
2,057,245	-		CCNA_01914	0.25	-0.1
2,057,301	+		CCNA_01914	0.31	+2.0
2,057,303	+		CCNA_01914	0.31	+1.7
2,057,310	+		CCNA_01914	0.32	+2.5
2,057,345	+		CCNA_01914	0.36	+1.7
2,057,353	-		CCNA_01914	0.37	+0.6
2,057,375	+		CCNA_01914	0.39	+2.7
2,057,382	-		CCNA_01914	0.40	+2.9
2,057,389	+		CCNA_01914	0.41	+2.1
2,057,402	-		CCNA_01914	0.42	+1.1
2,057,438	+		CCNA_01914	0.46	+2.8
2,057,446	-		CCNA_01914	0.47	+1.4
2,057,487	+		CCNA_01914	0.52	+1.7
2,057,487	+		CCNA_01914	0.52	+2.7
2,057,487	+		CCNA_01914	0.52	+2.0
2,057,488	+		CCNA_01914	0.52	+2.4
2,057,495	-		CCNA_01914	0.53	+1.4
2,057,495	-		CCNA_01914	0.53	+1.7
2,057,537	+		CCNA_01914	0.57	+2.2
2,057,576	+		CCNA_01914	0.61	+1.4
2,057,578	-		CCNA_01914	0.62	+1.4
2,057,595	+		CCNA_01914	0.64	+3.0
2,057,615	+		CCNA_01914	0.66	+2.1
2,057,623	-		CCNA_01914	0.67	+1.7
2,057,686	+		CCNA_01914	0.74	+2.0
2,057,686	+		CCNA_01914	0.74	+2.1
2,057,703	-		CCNA_01914	0.75	+0.9
2,057,745	+		CCNA_01914	0.80	+2.1
2,057,782	+		CCNA_01914	0.84	+2.5
2,057,790	-		CCNA_01914	0.85	+1.7
2,057,791	+		CCNA_01914	0.85	+2.1
2,057,791	-		CCNA_01914	0.85	+2.4
2,057,793	+		CCNA_01914	0.85	+2.3
2,057,799	+		CCNA_01914	0.86	+2.3
2,057,799	+		CCNA_01914	0.86	+2.4
2,057,816	-		CCNA_01914	0.88	+2.8
2,057,825	+		CCNA_01914	0.89	+2.1
2,057,835	+				+2.0
2,057,843	+				+2.9
2,057,846	-				+0.2
2,057,870	+				+1.4
2,057,880	+				+2.2
2,057,884	+				+1.9
2,057,915	-				+0.7
2,057,932	-				+0.9
2,057,981	+				+0.9
2,057,990	+				+0.1
2,057,991	+				-0.1
2,058,018	+		CCNA_01915	0.13	-0.9
2,058,044	-		CCNA_01915	0.16	+2.4
2,058,137	+		CCNA_01915	0.29	-0.2
2,058,191	+		CCNA_01915	0.36	+0.9
2,058,204	-		CCNA_01915	0.38	+0.9
2,058,229	+		CCNA_01915	0.41	-0.1
2,058,251	-		CCNA_01915	0.44	+0.9
2,058,253	+		CCNA_01915	0.45	-1.5
2,058,263	+		CCNA_01915	0.46	-1.0
2,058,263	+		CCNA_01915	0.46	-0.9
2,058,346	-		CCNA_01915	0.57	+1.4
2,058,346	-		CCNA_01915	0.57	+0.1
2,058,346	-		CCNA_01915	0.57	+2.4
2,058,365	-		CCNA_01915	0.60	+1.4
2,058,365	-		CCNA_01915	0.60	+1.4
2,058,369	+		CCNA_01915	0.60	-2.2
2,058,369	+		CCNA_01915	0.60	-0.3
2,058,377	-		CCNA_01915	0.61	+1.4
2,058,451	+		CCNA_01915	0.71	+0.1
2,058,459	-		CCNA_01915	0.72	-0.1
2,058,475	-		CCNA_01915	0.75	+1.4
2,058,505	+		CCNA_01915	0.79	-1.9
2,058,513	-		CCNA_01915	0.80	-0.9
2,058,513	-		CCNA_01915	0.80	+0.1
2,058,515	-		CCNA_01915	0.80	+2.4
2,058,639	+				-0.0
2,058,644	+				+0.4
2,058,652	-				-1.6
2,058,707	+		CCNA_03957	0.22	-0.3
2,058,707	+		CCNA_03957	0.22	-0.4
2,058,707	+		CCNA_03957	0.22	+1.4
2,058,707	+		CCNA_03957	0.22	-0.5
2,058,707	+		CCNA_03957	0.22	-0.4
2,058,707	+		CCNA_03957	0.22	+0.3
2,058,707	+		CCNA_03957	0.22	-0.2
2,058,715	-		CCNA_03957	0.26	-1.4
2,058,725	+		CCNA_03957	0.30	-0.4
2,058,725	-		CCNA_03957	0.30	-0.9
2,058,762	+		CCNA_03957	0.46	+0.3
2,058,762	+		CCNA_03957	0.46	-0.5
2,058,782	-		CCNA_03957	0.54	+0.1
2,058,788	-		CCNA_03957	0.57	-0.8
2,058,808	+		CCNA_03957	0.65	-0.4
2,058,816	-		CCNA_03957	0.69	-2.4
2,058,816	-		CCNA_03957	0.69	+0.6