Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01526

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
1,633,654	-		CCNA_01524	0.77	+0.6
1,633,680	-		CCNA_01524	0.78	-0.6
1,633,680	-		CCNA_01524	0.78	-0.8
1,633,692	+		CCNA_01524	0.79	+2.5
1,633,697	+		CCNA_01524	0.79	+1.0
1,633,724	+		CCNA_01524	0.81	+1.5
1,633,729	+		CCNA_01524	0.81	-0.2
1,633,729	-		CCNA_01524	0.81	+1.1
1,633,767	-		CCNA_01524	0.83	-0.6
1,633,789	+		CCNA_01524	0.84	+0.0
1,633,789	+		CCNA_01524	0.84	-2.4
1,633,789	+		CCNA_01524	0.84	+0.8
1,633,789	+		CCNA_01524	0.84	-0.4
1,633,789	+		CCNA_01524	0.84	+0.5
1,633,789	+		CCNA_01524	0.84	-0.0
1,633,789	+		CCNA_01524	0.84	+1.1
1,633,793	+		CCNA_01524	0.85	-0.0
1,633,793	+		CCNA_01524	0.85	-1.2
1,633,797	-		CCNA_01524	0.85	+0.7
1,633,797	-				+0.2
1,633,798	-		CCNA_01524	0.85	-0.3
1,633,798	-		CCNA_01524	0.85	-0.4
1,633,847	+		CCNA_01524	0.88	+0.2
1,633,852	+		CCNA_01524	0.88	+0.4
1,633,855	-		CCNA_01524	0.88	+0.6
1,633,855	-		CCNA_01524	0.88	+1.1
1,633,855	-		CCNA_01524	0.88	+0.6
1,633,860	-		CCNA_01524	0.88	+1.0
1,633,896	-				+0.9
1,633,915	+				+0.8
1,633,923	-				-0.2
1,633,923	-				-0.8
1,633,923	-				-0.4
1,633,947	-				-0.5
1,633,985	+				-0.9
1,633,985	+				-0.6
1,633,993	-				-0.6
1,633,994	-				+1.5
1,634,017	+				-2.7
1,634,022	+				-0.3
1,634,023	+				-0.0
1,634,025	-				+2.5
1,634,025	-				+1.0
1,634,026	-				+1.0
1,634,062	+				+0.2
1,634,062	+				-0.0
1,634,064	+				-0.8
1,634,070	-				+0.7
1,634,070	-				+0.0
1,634,075	+				-1.2
1,634,075	+				+0.3
1,634,075	+				-0.9
1,634,083	-				+1.5
1,634,083	-				-0.0
1,634,083	-				+1.0
1,634,083	-				-1.5
1,634,083	-				-0.5
1,634,107	-				+0.1
1,634,112	+				+0.2
1,634,112	+				+0.2
1,634,112	+				+1.3
1,634,112	+				+0.3
1,634,112	+				-0.6
1,634,112	+				-0.2
1,634,120	-				+0.9
1,634,120	-				+1.7
1,634,120	-				+0.5
1,634,124	+				+1.5
1,634,124	+				+0.1
1,634,124	+				+0.1
1,634,124	+				+0.0
1,634,124	+				-1.2
1,634,124	+				-0.0
1,634,124	+				+0.5
1,634,124	+				-1.4
1,634,124	+				-0.1
1,634,124	+				+1.3
1,634,124	+				-1.0
1,634,132	-				+0.5
1,634,132	-				-0.8
1,634,132	-				-0.0
1,634,132	-				-1.7
1,634,132	-				+0.2
1,634,212	+				+0.8
1,634,230	-				-2.0
1,634,283	+				+0.2
1,634,290	-				-1.5
1,634,297	-				-1.9
1,634,345	+		CCNA_01525	0.19	+0.6
1,634,347	+		CCNA_01525	0.19	-0.1
1,634,355	-		CCNA_01525	0.21	+2.5
1,634,417	-		CCNA_01525	0.35	+0.2
1,634,417	-		CCNA_01525	0.35	-0.3
1,634,515	+		CCNA_01525	0.58	-0.4
1,634,534	+		CCNA_01525	0.63	+0.3
1,634,542	-		CCNA_01525	0.65	+1.0
1,634,545	+		CCNA_01525	0.65	+0.5
1,634,561	-		CCNA_01525	0.69	+1.5
1,634,564	+		CCNA_01525	0.70	+1.1
1,634,565	+		CCNA_01525	0.70	-0.2
1,634,592	+		CCNA_01525	0.77	+0.2
1,634,599	+		CCNA_01525	0.78	+0.6
1,634,612	+		CCNA_01525	0.81	+0.3
1,634,641	+		CCNA_01525	0.88	+1.5
1,634,650	-				+1.5
1,634,655	+				+1.6
1,634,686	+				+1.2
1,634,792	+		CCNA_01526	0.39	+1.1
1,634,806	-		CCNA_01526	0.43	+0.5
1,634,812	+		CCNA_01526	0.44	+0.6
1,634,814	-		CCNA_01526	0.45	+2.5
1,634,862	+		CCNA_01526	0.58	+1.2
1,634,862	+		CCNA_01526	0.58	+1.0
1,634,865	-		CCNA_01526	0.59	+0.2
1,634,880	-		CCNA_01526	0.63	+2.5
1,634,895	+		CCNA_01526	0.67	+1.0
1,634,908	+		CCNA_01526	0.71	+0.7
1,634,929	+		CCNA_01526	0.77	+1.0
1,634,956	+		CCNA_01526	0.84	+1.0
1,634,979	+				+1.6
1,635,030	+				+1.1
1,635,039	+				+1.7
1,635,057	+				+1.1
1,635,256	+				+0.7
1,635,285	-				+0.5
1,635,286	-				-0.2
1,635,337	+				+0.8
1,635,342	+				+1.2
1,635,342	+				+1.3
1,635,342	+				+2.9
1,635,350	-		CCNA_01527	0.11	-1.7
1,635,350	-		CCNA_01527	0.11	-0.2
1,635,350	-		CCNA_01527	0.11	+0.2
1,635,350	-		CCNA_01527	0.11	-0.1
1,635,350	-		CCNA_01527	0.11	-0.3
1,635,386	+		CCNA_01527	0.15	+1.2
1,635,386	+		CCNA_01527	0.15	+1.2
1,635,430	-		CCNA_01527	0.21	-1.3
1,635,438	+		CCNA_01527	0.22	+1.2
1,635,440	+		CCNA_01527	0.22	+1.4
1,635,446	-		CCNA_01527	0.23	-0.5
1,635,448	-		CCNA_01527	0.23	+0.0
1,635,456	-		CCNA_01527	0.24	-0.0
1,635,457	+		CCNA_01527	0.24	+0.0
1,635,460	+		CCNA_01527	0.24	+1.1
1,635,499	+		CCNA_01527	0.29	+0.7
1,635,499	+		CCNA_01527	0.29	+1.2
1,635,499	+		CCNA_01527	0.29	+0.8
1,635,514	+		CCNA_01527	0.31	+0.8
1,635,541	-		CCNA_01527	0.34	+0.2
1,635,545	+		CCNA_01527	0.35	+1.2
1,635,567	+		CCNA_01527	0.37	+1.5
1,635,584	+		CCNA_01527	0.39	+0.9
1,635,593	+		CCNA_01527	0.40	+1.6
1,635,611	-		CCNA_01527	0.43	+1.0
1,635,626	+		CCNA_01527	0.44	+0.4
1,635,634	-		CCNA_01527	0.45	+0.5
1,635,660	+		CCNA_01527	0.49	+0.9
1,635,661	-		CCNA_01527	0.49	-0.3
1,635,661	-		CCNA_01527	0.49	-0.5
1,635,693	-		CCNA_01527	0.53	+0.2
1,635,733	-		CCNA_01527	0.57	-0.5
1,635,738	+		CCNA_01527	0.58	+1.3
1,635,738	+		CCNA_01527	0.58	+1.4
1,635,738	+		CCNA_01527	0.58	+1.0
1,635,738	+		CCNA_01527	0.58	+0.9
1,635,738	+		CCNA_01527	0.58	+0.9
1,635,738	+		CCNA_01527	0.58	+0.8
1,635,738	+		CCNA_01527	0.58	+1.3
1,635,746	-		CCNA_01527	0.59	+0.3
1,635,746	-		CCNA_01527	0.59	+1.4
1,635,746	-		CCNA_01527	0.59	+1.2
1,635,746	-		CCNA_01527	0.59	+0.1
1,635,747	-		CCNA_01527	0.59	+0.6
1,635,785	-		CCNA_01527	0.64	-1.5
1,635,806	-		CCNA_01527	0.66	-1.3
1,635,857	+		CCNA_01527	0.73	+1.1
1,635,897	+		CCNA_01527	0.77	+0.6
1,635,897	+		CCNA_01527	0.77	+1.2
1,635,898	-		CCNA_01527	0.77	+0.3
1,635,905	-		CCNA_01527	0.78	-0.8
1,635,905	-		CCNA_01527	0.78	+0.1
1,635,905	-		CCNA_01527	0.78	-2.2
1,635,916	+		CCNA_01527	0.80	+1.4
1,635,918	+		CCNA_01527	0.80	+1.0
1,635,918	+		CCNA_01527	0.80	+1.4
1,635,926	-		CCNA_01527	0.81	-1.6
1,635,926	-		CCNA_01527	0.81	-1.9
1,635,926	-		CCNA_01527	0.81	-0.4
1,635,936	-		CCNA_01527	0.82	+3.1
1,635,936	-		CCNA_01527	0.82	-0.0
1,635,958	+		CCNA_01527	0.85	+1.5
1,635,958	+		CCNA_01527	0.85	+1.2
1,635,986	+		CCNA_01527	0.88	+1.5
1,635,994	-		CCNA_01527	0.89	+1.0
1,636,000	+				+1.1
1,636,004	-				+1.1
1,636,013	+				+0.9