Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01425

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
1,540,561	+				-0.4
1,540,676	-				-0.4
1,540,677	-				-0.7
1,540,688	+				+0.0
1,540,745	+		CCNA_01424	0.15	+0.3
1,540,753	-		CCNA_01424	0.16	+0.9
1,540,767	+		CCNA_01424	0.19	+0.1
1,540,775	-		CCNA_01424	0.21	+0.1
1,540,959	+		CCNA_01424	0.58	-0.2
1,540,959	+		CCNA_01424	0.58	-0.6
1,540,965	-		CCNA_01424	0.59	-0.6
1,540,969	+		CCNA_01424	0.60	+0.2
1,540,977	-		CCNA_01424	0.62	-0.7
1,541,006	+		CCNA_01424	0.67	+0.5
1,541,011	+		CCNA_01424	0.68	-2.1
1,541,029	-		CCNA_01424	0.72	-0.3
1,541,031	+		CCNA_01424	0.73	-3.2
1,541,039	+		CCNA_01424	0.74	+0.0
1,541,044	+		CCNA_01424	0.75	-0.4
1,541,044	+		CCNA_01424	0.75	-1.2
1,541,047	-		CCNA_01424	0.76	-1.9
1,541,052	-		CCNA_01424	0.77	-0.7
1,541,052	-		CCNA_01424	0.77	+0.3
1,541,052	-		CCNA_01424	0.77	+0.4
1,541,052	-		CCNA_01424	0.77	+0.6
1,541,052	-		CCNA_01424	0.77	+0.1
1,541,052	-		CCNA_01424	0.77	-1.9
1,541,058	+		CCNA_01424	0.78	-2.5
1,541,058	+		CCNA_01424	0.78	-1.1
1,541,058	+		CCNA_01424	0.78	+0.9
1,541,066	-		CCNA_01424	0.80	+0.4
1,541,066	-		CCNA_01424	0.80	+2.4
1,541,069	+		CCNA_01424	0.80	+0.5
1,541,168	-				+0.1
1,541,223	-				-0.6
1,541,225	+				+1.7
1,541,233	-				+0.9
1,541,270	-				-1.1
1,541,273	+				+1.3
1,541,273	+				+1.8
1,541,273	+				+1.8
1,541,299	+				+2.8
1,541,299	+				+2.3
1,541,381	-				+1.4
1,541,454	+				+2.4
1,541,462	-				-0.1
1,541,462	-				+1.4
1,541,464	+				+0.2
1,541,467	-				-0.6
1,541,467	-				+2.4
1,541,552	+				+1.2
1,541,552	+				+1.7
1,541,552	+				-0.3
1,541,552	+				+0.8
1,541,560	-				+1.7
1,541,560	-				+0.9
1,541,560	-				+1.2
1,541,579	+				-0.2
1,541,593	+				+0.2
1,541,624	+		CCNA_01425	0.10	+0.4
1,541,730	+		CCNA_01425	0.15	+1.4
1,541,730	+		CCNA_01425	0.15	+0.8
1,541,740	+		CCNA_01425	0.15	+0.3
1,541,740	+		CCNA_01425	0.15	+0.7
1,541,748	-		CCNA_01425	0.16	+0.9
1,541,748	-		CCNA_01425	0.16	+0.9
1,541,773	-		CCNA_01425	0.17	+0.1
1,541,805	-		CCNA_01425	0.19	-1.1
1,541,807	+		CCNA_01425	0.19	+2.4
1,541,812	+		CCNA_01425	0.19	+0.5
1,541,820	+		CCNA_01425	0.19	+0.8
1,541,842	+		CCNA_01425	0.20	+1.2
1,541,878	+		CCNA_01425	0.22	+1.3
1,541,886	-		CCNA_01425	0.22	+0.4
1,541,894	-		CCNA_01425	0.23	+2.4
1,541,943	+		CCNA_01425	0.25	+0.7
1,541,956	-		CCNA_01425	0.26	-0.7
1,541,958	+		CCNA_01425	0.26	+1.0
1,541,983	+		CCNA_01425	0.27	+1.0
1,542,002	+		CCNA_01425	0.28	+1.2
1,542,080	-		CCNA_01425	0.31	+0.6
1,542,104	+		CCNA_01425	0.32	+1.7
1,542,112	-		CCNA_01425	0.33	-0.4
1,542,112	-		CCNA_01425	0.33	+1.5
1,542,112	-		CCNA_01425	0.33	+0.6
1,542,136	+		CCNA_01425	0.34	+1.2
1,542,141	-		CCNA_01425	0.34	-0.8
1,542,181	-		CCNA_01425	0.36	-0.0
1,542,194	+		CCNA_01425	0.37	-0.6
1,542,267	+		CCNA_01425	0.40	+0.9
1,542,283	-		CCNA_01425	0.41	+0.1
1,542,286	+		CCNA_01425	0.41	+0.6
1,542,310	-		CCNA_01425	0.42	+0.2
1,542,360	-		CCNA_01425	0.44	+1.3
1,542,386	+		CCNA_01425	0.46	+0.9
1,542,388	-		CCNA_01425	0.46	+0.9
1,542,407	+		CCNA_01425	0.47	+0.2
1,542,407	+		CCNA_01425	0.47	+1.2
1,542,407	+		CCNA_01425	0.47	+0.4
1,542,415	-		CCNA_01425	0.47	+2.1
1,542,472	-		CCNA_01425	0.50	-1.0
1,542,481	+		CCNA_01425	0.50	+0.4
1,542,499	-		CCNA_01425	0.51	-0.6
1,542,517	-		CCNA_01425	0.52	+0.1
1,542,524	-		CCNA_01425	0.52	+0.3
1,542,524	-		CCNA_01425	0.52	+0.6
1,542,524	-		CCNA_01425	0.52	-1.7
1,542,582	+		CCNA_01425	0.55	+0.9
1,542,613	+		CCNA_01425	0.56	+1.3
1,542,621	-		CCNA_01425	0.57	+0.6
1,542,797	-		CCNA_01425	0.65	-0.1
1,542,807	-		CCNA_01425	0.65	+1.0
1,542,818	+		CCNA_01425	0.66	+0.5
1,542,826	-		CCNA_01425	0.66	+1.1
1,542,840	+		CCNA_01425	0.67	+0.8
1,542,850	+		CCNA_01425	0.67	+1.1
1,542,850	+		CCNA_01425	0.67	+1.5
1,542,858	-		CCNA_01425	0.68	+3.4
1,542,868	-		CCNA_01425	0.68	-0.6
1,542,871	+		CCNA_01425	0.68	-0.0
1,542,877	-		CCNA_01425	0.69	-1.9
1,542,914	-		CCNA_01425	0.70	+1.4
1,542,943	+		CCNA_01425	0.72	+0.9
1,542,943	+		CCNA_01425	0.72	+1.3
1,542,943	+		CCNA_01425	0.72	+0.3
1,542,951	-		CCNA_01425	0.72	+1.7
1,542,953	+		CCNA_01425	0.72	+1.8
1,542,961	-		CCNA_01425	0.73	-0.7
1,543,014	+		CCNA_01425	0.75	+0.8
1,543,019	+		CCNA_01425	0.75	+1.2
1,543,057	+		CCNA_01425	0.77	+1.3
1,543,100	-		CCNA_01425	0.79	+3.4
1,543,109	+		CCNA_01425	0.79	+0.1
1,543,114	+		CCNA_01425	0.80	+0.4
1,543,131	+		CCNA_01425	0.81	+2.0
1,543,132	-		CCNA_01425	0.81	+0.4
1,543,139	-		CCNA_01425	0.81	+0.6
1,543,139	-		CCNA_01425	0.81	+1.2
1,543,180	+		CCNA_01425	0.83	+1.6
1,543,188	-		CCNA_01425	0.83	-1.1
1,543,229	-		CCNA_01425	0.85	+0.4
1,543,257	+		CCNA_01425	0.86	+1.6
1,543,259	+		CCNA_01425	0.86	+1.3
1,543,269	+		CCNA_01425	0.87	+1.6
1,543,287	-		CCNA_01425	0.88	+1.2
1,543,293	+		CCNA_01425	0.88	+0.3
1,543,306	-		CCNA_01425	0.89	+0.3
1,543,306	-		CCNA_01425	0.89	+1.1
1,543,332	+		CCNA_01425	0.90	+2.0
1,543,332	+				+0.4
1,543,359	+				+1.0
1,543,367	-				-0.4
1,543,411	+				+1.2
1,543,419	-				+0.2
1,543,457	+				+1.7
1,543,535	-				-0.6
1,543,535	-				+0.1
1,543,579	+				+0.0
1,543,587	-				+0.1
1,543,590	+				+0.1
1,543,598	-				+1.6
1,543,598	-				+1.4
1,543,605	+				-1.3
1,543,608	-				-0.7
1,543,620	+				+0.9
1,543,620	+				+0.2
1,543,620	+				-0.3
1,543,628	-				-0.9
1,543,628	-				-0.4
1,543,639	+				+0.1
1,543,686	+				-1.9
1,543,694	-		CCNA_01426	0.10	-0.8
1,543,694	-		CCNA_01426	0.10	+0.5
1,543,734	-		CCNA_01426	0.17	+0.1
1,543,843	+		CCNA_01426	0.37	+0.1
1,543,843	+		CCNA_01426	0.37	-0.4
1,543,851	-		CCNA_01426	0.38	+0.1
1,543,851	-		CCNA_01426	0.38	+1.9
1,543,851	-		CCNA_01426	0.38	-0.3
1,543,851	-		CCNA_01426	0.38	+2.0
1,543,851	-		CCNA_01426	0.38	-0.2
1,543,851	-		CCNA_01426	0.38	+0.1
1,543,855	+		CCNA_01426	0.39	+0.4
1,543,863	-		CCNA_01426	0.41	+0.6
1,543,863	-		CCNA_01426	0.41	-0.8
1,543,865	+		CCNA_01426	0.41	+0.0
1,543,897	-		CCNA_01426	0.47	-0.4
1,543,907	-		CCNA_01426	0.48	-1.3
1,543,937	-		CCNA_01426	0.54	+0.4
1,543,943	+		CCNA_01426	0.55	+0.1
1,543,947	-		CCNA_01426	0.56	-1.7
1,543,951	-		CCNA_01426	0.56	-0.5
1,543,971	-		CCNA_01426	0.60	-0.6
1,543,982	+		CCNA_01426	0.62	-1.5
1,543,993	+		CCNA_01426	0.64	+1.1
1,544,039	+		CCNA_01426	0.72	-0.2
1,544,091	+		CCNA_01426	0.82	-0.6
1,544,099	-		CCNA_01426	0.83	-0.2
1,544,114	-		CCNA_01426	0.86	-1.4
1,544,380	+				-1.7
1,544,380	+				-2.0
1,544,388	-				+0.9
1,544,503	-				-0.2