Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01412

Experiment: PYE 0.5x 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep2 12 days
1,528,979	-				-2.6
1,528,984	-				-0.3
1,529,010	+				-1.0
1,529,070	-				+1.4
1,529,121	-				+0.1
1,529,165	+				-0.6
1,529,165	+				-0.6
1,529,173	-				+0.5
1,529,173	-				+0.7
1,529,173	-				+0.9
1,529,205	-				+0.7
1,529,225	+				-0.6
1,529,271	+				-1.3
1,529,271	+				+0.1
1,529,279	-				+1.0
1,529,289	+				+0.4
1,529,297	-				+0.4
1,529,297	-				+1.2
1,529,299	+		CCNA_03949	0.10	+2.4
1,529,299	+		CCNA_03949	0.10	+1.4
1,529,307	-		CCNA_03949	0.12	-0.1
1,529,380	-		CCNA_03949	0.28	+2.8
1,529,410	-		CCNA_03949	0.34	+0.2
1,529,421	+		CCNA_03949	0.37	+1.4
1,529,429	-		CCNA_03949	0.38	-0.1
1,529,439	+		CCNA_03949	0.41	-0.4
1,529,442	-		CCNA_03949	0.41	+0.5
1,529,468	-		CCNA_03949	0.47	+0.6
1,529,468	-		CCNA_03949	0.47	+0.2
1,529,515	+		CCNA_03949	0.57	+2.4
1,529,517	-		CCNA_03949	0.58	-0.6
1,529,523	-		CCNA_03949	0.59	+1.0
1,529,534	-		CCNA_03949	0.61	+0.6
1,529,534	-		CCNA_03949	0.61	+0.6
1,529,534	-		CCNA_03949	0.61	-0.2
1,529,606	+		CCNA_03949	0.77	+1.4
1,529,606	+		CCNA_03949	0.77	-0.2
1,529,606	+		CCNA_03949	0.77	-1.4
1,529,608	+		CCNA_03949	0.77	+0.4
1,529,608	+		CCNA_03949	0.77	+1.4
1,529,614	-		CCNA_03949	0.79	+0.7
1,529,614	-		CCNA_03949	0.79	+1.0
1,529,616	-		CCNA_03949	0.79	+0.6
1,529,616	-		CCNA_03949	0.79	+0.6
1,529,659	+		CCNA_03949	0.88	+2.1
1,529,659	+		CCNA_03949	0.88	-1.8
1,529,667	-				-0.5
1,529,667	-				+0.4
1,529,667	-				-1.3
1,529,671	-				+0.6
1,529,684	-				+0.1
1,529,695	+				+2.4
1,529,727	+				+0.1
1,529,728	-				+0.6
1,529,756	-				-0.8
1,529,756	-				+0.2
1,529,783	-				+1.0
1,529,783	-				+1.1
1,529,783	-				+1.0
1,529,784	+				-1.9
1,529,786	+				+1.3
1,529,930	-				+0.6
1,529,948	+				+0.2
1,529,953	+				+1.2
1,529,953	+				+0.5
1,529,958	+				-0.5
1,530,014	+				+0.3
1,530,052	-				-0.2
1,530,088	+				+0.3
1,530,114	+		CCNA_01412	0.12	+0.4
1,530,124	+		CCNA_01412	0.13	+1.1
1,530,124	+		CCNA_01412	0.13	+0.8
1,530,193	-		CCNA_01412	0.19	-1.6
1,530,208	+		CCNA_01412	0.20	+0.9
1,530,224	-		CCNA_01412	0.22	-0.6
1,530,231	+		CCNA_01412	0.22	+0.7
1,530,291	+		CCNA_01412	0.28	+0.3
1,530,299	-		CCNA_01412	0.28	+0.1
1,530,316	+		CCNA_01412	0.30	+1.2
1,530,316	+		CCNA_01412	0.30	+1.1
1,530,350	-		CCNA_01412	0.33	+1.8
1,530,368	+		CCNA_01412	0.34	+0.6
1,530,376	-		CCNA_01412	0.35	+2.4
1,530,380	+		CCNA_01412	0.35	+0.3
1,530,388	+		CCNA_01412	0.36	+1.0
1,530,403	+		CCNA_01412	0.37	-0.5
1,530,411	-		CCNA_01412	0.38	-1.0
1,530,422	+		CCNA_01412	0.39	+1.1
1,530,422	+		CCNA_01412	0.39	+0.6
1,530,469	+		CCNA_01412	0.43	+1.1
1,530,469	+		CCNA_01412	0.43	+0.7
1,530,469	+		CCNA_01412	0.43	+1.7
1,530,477	-		CCNA_01412	0.44	+2.4
1,530,505	+		CCNA_01412	0.46	+1.3
1,530,505	+		CCNA_01412	0.46	+0.0
1,530,506	+		CCNA_01412	0.46	+1.2
1,530,513	-		CCNA_01412	0.47	-2.0
1,530,513	-		CCNA_01412	0.47	-0.9
1,530,538	+		CCNA_01412	0.49	+0.9
1,530,538	+		CCNA_01412	0.49	+1.3
1,530,538	-		CCNA_01412	0.49	+2.4
1,530,539	+		CCNA_01412	0.49	+1.3
1,530,545	-		CCNA_01412	0.50	+2.4
1,530,546	-		CCNA_01412	0.50	+1.4
1,530,547	-		CCNA_01412	0.50	+1.4
1,530,548	+		CCNA_01412	0.50	+1.3
1,530,549	+		CCNA_01412	0.50	+1.2
1,530,607	+		CCNA_01412	0.55	+1.9
1,530,615	-		CCNA_01412	0.56	-0.9
1,530,624	+				+2.4
1,530,659	+		CCNA_01412	0.60	+1.2
1,530,665	+		CCNA_01412	0.60	+1.0
1,530,667	-		CCNA_01412	0.60	+2.4
1,530,686	+		CCNA_01412	0.62	+1.4
1,530,691	+		CCNA_01412	0.62	+0.8
1,530,696	+		CCNA_01412	0.63	+1.5
1,530,701	+		CCNA_01412	0.63	+1.3
1,530,701	+		CCNA_01412	0.63	+1.0
1,530,703	+		CCNA_01412	0.64	+1.6
1,530,709	-		CCNA_01412	0.64	+2.4
1,530,709	-		CCNA_01412	0.64	+0.8
1,530,709	-		CCNA_01412	0.64	+1.4
1,530,729	+		CCNA_01412	0.66	+0.7
1,530,748	+		CCNA_01412	0.67	+3.8
1,530,755	+		CCNA_01412	0.68	+1.1
1,530,760	+		CCNA_01412	0.68	+0.9
1,530,763	-		CCNA_01412	0.69	+0.4
1,530,767	+		CCNA_01412	0.69	+0.5
1,530,768	-		CCNA_01412	0.69	+2.4
1,530,805	+		CCNA_01412	0.72	+0.7
1,530,805	+		CCNA_01412	0.72	+1.3
1,530,813	-		CCNA_01412	0.73	+2.4
1,530,813	-		CCNA_01412	0.73	-0.7
1,530,828	-		CCNA_01412	0.74	+0.4
1,530,855	-		CCNA_01412	0.77	+0.8
1,530,912	+		CCNA_01412	0.82	+1.4
1,530,919	+		CCNA_01412	0.82	+1.0
1,530,922	-		CCNA_01412	0.83	-1.5
1,530,927	-		CCNA_01412	0.83	+0.6
1,530,957	+		CCNA_01412	0.86	+1.2
1,531,007	+				+1.7
1,531,007	+				+1.5
1,531,012	+				+1.1
1,531,015	-				+0.4
1,531,017	+				+1.0
1,531,068	+				+1.0
1,531,078	+				+1.6
1,531,100	+				+0.9
1,531,100	+				+1.5
1,531,211	+		CCNA_01413	0.14	+0.9
1,531,217	-		CCNA_01413	0.15	-0.2
1,531,226	+		CCNA_01413	0.16	+1.4
1,531,232	+		CCNA_01413	0.17	+0.6
1,531,234	-		CCNA_01413	0.18	+0.8
1,531,244	+		CCNA_01413	0.19	+0.8
1,531,250	+		CCNA_01413	0.20	+1.0
1,531,324	+		CCNA_01413	0.33	+0.9
1,531,344	+		CCNA_01413	0.36	+0.6
1,531,344	+		CCNA_01413	0.36	+0.5
1,531,344	+		CCNA_01413	0.36	+0.0
1,531,363	+		CCNA_01413	0.39	-0.9
1,531,380	+		CCNA_01413	0.42	+0.8
1,531,383	-		CCNA_01413	0.42	-1.3
1,531,388	-		CCNA_01413	0.43	+0.3
1,531,403	+		CCNA_01413	0.46	+1.0
1,531,499	+		CCNA_01413	0.62	-0.0
1,531,546	-		CCNA_01413	0.70	+1.4
1,531,573	+		CCNA_01413	0.74	+1.0
1,531,581	-		CCNA_01413	0.76	+0.8
1,531,596	-		CCNA_01413	0.78	+2.2
1,531,609	+		CCNA_01413	0.80	+1.3
1,531,625	+		CCNA_01413	0.83	+0.9
1,531,722	+				+0.6
1,531,746	+				+0.6
1,531,754	+				+0.8
1,531,754	+				+0.4
1,531,754	+				+0.9
1,531,754	+				+0.4
1,531,754	+				+1.8
1,531,754	+				+1.0
1,531,754	+				+0.8
1,531,754	+				+0.6
1,531,754	+				+0.9
1,531,762	-				-2.3
1,531,762	-				-1.7
1,531,790	+				-1.5
1,531,795	+				-4.0
1,531,801	+				-5.5
1,531,846	+		CCNA_01414	0.10	-1.0
1,531,849	-		CCNA_01414	0.11	+2.4
1,531,856	+		CCNA_01414	0.11	-3.1
1,531,856	+		CCNA_01414	0.11	-3.0
1,531,856	+		CCNA_01414	0.11	-4.6
1,531,864	-		CCNA_01414	0.12	-1.6
1,531,866	-		CCNA_01414	0.12	+0.9
1,531,887	+		CCNA_01414	0.14	-1.9
1,531,892	+		CCNA_01414	0.15	-3.7
1,531,892	+		CCNA_01414	0.15	-4.0
1,531,911	-		CCNA_01414	0.17	-2.8
1,531,949	+				+2.4
1,531,974	+		CCNA_01414	0.23	-3.9
1,532,038	-		CCNA_01414	0.29	+2.4
1,532,064	+		CCNA_01414	0.31	-2.8
1,532,066	+		CCNA_01414	0.31	-4.0
1,532,102	+		CCNA_01414	0.35	-4.4