Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24170 and BWI76_RS24175 are separated by 67 nucleotides BWI76_RS24175 and BWI76_RS24180 are separated by 70 nucleotides BWI76_RS24180 and BWI76_RS24185 are separated by 168 nucleotides
BWI76_RS24170: BWI76_RS24170 - nucleoside permease, at 5,038,628 to 5,039,884
_RS24170
BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090
_RS24175
BWI76_RS24180: BWI76_RS24180 - hypothetical protein, at 5,042,161 to 5,042,359
_RS24180
BWI76_RS24185: BWI76_RS24185 - membrane protein, at 5,042,528 to 5,043,244
_RS24185
Position (kb)
5039
5040
5041
5042
5043 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 5038.963 kb on + strand, within BWI76_RS24170 at 5038.971 kb on - strand, within BWI76_RS24170 at 5039.060 kb on - strand, within BWI76_RS24170 at 5039.110 kb on + strand, within BWI76_RS24170 at 5039.133 kb on + strand, within BWI76_RS24170 at 5039.139 kb on - strand, within BWI76_RS24170 at 5039.141 kb on - strand, within BWI76_RS24170 at 5039.141 kb on - strand, within BWI76_RS24170 at 5039.154 kb on + strand, within BWI76_RS24170 at 5039.162 kb on - strand, within BWI76_RS24170 at 5039.162 kb on - strand, within BWI76_RS24170 at 5039.490 kb on - strand, within BWI76_RS24170 at 5039.566 kb on + strand, within BWI76_RS24170 at 5039.576 kb on + strand at 5039.830 kb on + strand at 5039.838 kb on - strand at 5039.865 kb on - strand at 5039.970 kb on + strand at 5039.970 kb on + strand at 5039.981 kb on + strand at 5040.016 kb on + strand at 5040.301 kb on - strand, within BWI76_RS24175 at 5040.313 kb on - strand, within BWI76_RS24175 at 5040.675 kb on - strand, within BWI76_RS24175 at 5040.676 kb on - strand, within BWI76_RS24175 at 5040.703 kb on - strand, within BWI76_RS24175 at 5040.857 kb on + strand, within BWI76_RS24175 at 5041.172 kb on + strand, within BWI76_RS24175 at 5041.187 kb on - strand, within BWI76_RS24175 at 5041.208 kb on + strand, within BWI76_RS24175 at 5041.216 kb on + strand, within BWI76_RS24175 at 5041.398 kb on - strand, within BWI76_RS24175 at 5041.411 kb on + strand, within BWI76_RS24175 at 5041.580 kb on - strand, within BWI76_RS24175 at 5041.638 kb on - strand, within BWI76_RS24175 at 5041.690 kb on + strand, within BWI76_RS24175 at 5041.839 kb on + strand, within BWI76_RS24175 at 5041.920 kb on + strand at 5042.011 kb on - strand at 5042.013 kb on + strand at 5042.013 kb on + strand at 5042.013 kb on + strand at 5042.021 kb on - strand at 5042.021 kb on - strand at 5042.036 kb on + strand at 5042.057 kb on - strand at 5042.138 kb on + strand at 5042.141 kb on + strand at 5042.160 kb on + strand at 5042.249 kb on + strand, within BWI76_RS24180 at 5042.257 kb on - strand, within BWI76_RS24180 at 5042.372 kb on + strand at 5042.407 kb on + strand at 5042.407 kb on + strand at 5042.528 kb on + strand at 5042.692 kb on + strand, within BWI76_RS24185 at 5042.722 kb on - strand, within BWI76_RS24185 at 5042.773 kb on + strand, within BWI76_RS24185 at 5042.781 kb on - strand, within BWI76_RS24185 at 5042.843 kb on + strand, within BWI76_RS24185 at 5042.999 kb on - strand, within BWI76_RS24185
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 5,038,963 + BWI76_RS24170 0.27 +0.0 5,038,971 - BWI76_RS24170 0.27 -1.0 5,039,060 - BWI76_RS24170 0.34 +0.3 5,039,110 + BWI76_RS24170 0.38 -0.0 5,039,133 + BWI76_RS24170 0.40 -0.4 5,039,139 - BWI76_RS24170 0.41 -1.4 5,039,141 - BWI76_RS24170 0.41 +0.3 5,039,141 - BWI76_RS24170 0.41 +1.6 5,039,154 + BWI76_RS24170 0.42 +1.6 5,039,162 - BWI76_RS24170 0.42 -1.4 5,039,162 - BWI76_RS24170 0.42 -0.1 5,039,490 - BWI76_RS24170 0.69 -1.7 5,039,566 + BWI76_RS24170 0.75 +0.5 5,039,576 + +2.1 5,039,830 + -0.2 5,039,838 - -1.8 5,039,865 - +1.1 5,039,970 + +0.8 5,039,970 + -0.9 5,039,981 + +0.2 5,040,016 + -0.1 5,040,301 - BWI76_RS24175 0.16 -0.2 5,040,313 - BWI76_RS24175 0.17 -1.1 5,040,675 - BWI76_RS24175 0.34 +0.8 5,040,676 - BWI76_RS24175 0.34 +0.1 5,040,703 - BWI76_RS24175 0.35 +0.0 5,040,857 + BWI76_RS24175 0.42 -4.4 5,041,172 + BWI76_RS24175 0.57 +0.1 5,041,187 - BWI76_RS24175 0.58 -2.0 5,041,208 + BWI76_RS24175 0.59 +0.1 5,041,216 + BWI76_RS24175 0.59 +0.2 5,041,398 - BWI76_RS24175 0.68 +0.1 5,041,411 + BWI76_RS24175 0.68 +2.2 5,041,580 - BWI76_RS24175 0.76 +0.4 5,041,638 - BWI76_RS24175 0.79 -0.2 5,041,690 + BWI76_RS24175 0.81 +0.4 5,041,839 + BWI76_RS24175 0.88 +0.6 5,041,920 + +0.1 5,042,011 - +0.1 5,042,013 + -0.1 5,042,013 + +0.1 5,042,013 + -2.8 5,042,021 - +1.3 5,042,021 - +2.1 5,042,036 + -0.1 5,042,057 - -0.2 5,042,138 + +1.1 5,042,141 + +0.2 5,042,160 + +0.2 5,042,249 + BWI76_RS24180 0.44 +1.8 5,042,257 - BWI76_RS24180 0.48 +0.8 5,042,372 + +0.5 5,042,407 + -1.3 5,042,407 + +0.6 5,042,528 + -0.4 5,042,692 + BWI76_RS24185 0.23 -2.0 5,042,722 - BWI76_RS24185 0.27 +0.7 5,042,773 + BWI76_RS24185 0.34 +0.1 5,042,781 - BWI76_RS24185 0.35 -0.3 5,042,843 + BWI76_RS24185 0.44 +0.3 5,042,999 - BWI76_RS24185 0.66 -2.2
Or see this region's nucleotide sequence