Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21785 and BWI76_RS21790 are separated by 352 nucleotides BWI76_RS21790 and BWI76_RS21795 are separated by 5 nucleotides BWI76_RS21795 and BWI76_RS21800 are separated by 347 nucleotides
BWI76_RS21785: BWI76_RS21785 - IS6 family transposase, at 4,552,134 to 4,552,736
_RS21785
BWI76_RS21790: BWI76_RS21790 - hypothetical protein, at 4,553,089 to 4,553,412
_RS21790
BWI76_RS21795: BWI76_RS21795 - EAL domain-containing protein, at 4,553,418 to 4,554,110
_RS21795
BWI76_RS21800: BWI76_RS21800 - MASE2 domain/diguanylate cyclase, at 4,554,458 to 4,555,516
_RS21800
Position (kb)
4553
4554
4555 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4552.484 kb on - strand, within BWI76_RS21785 at 4552.497 kb on + strand, within BWI76_RS21785 at 4552.516 kb on + strand, within BWI76_RS21785 at 4552.524 kb on - strand, within BWI76_RS21785 at 4552.565 kb on + strand, within BWI76_RS21785 at 4552.566 kb on + strand, within BWI76_RS21785 at 4552.568 kb on - strand, within BWI76_RS21785 at 4552.573 kb on - strand, within BWI76_RS21785 at 4552.578 kb on - strand, within BWI76_RS21785 at 4552.682 kb on - strand at 4552.686 kb on + strand at 4552.707 kb on + strand at 4552.723 kb on - strand at 4552.738 kb on - strand at 4552.739 kb on + strand at 4552.749 kb on + strand at 4552.755 kb on + strand at 4552.755 kb on + strand at 4552.756 kb on - strand at 4552.763 kb on - strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.770 kb on + strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.778 kb on - strand at 4552.788 kb on - strand at 4552.788 kb on - strand at 4552.789 kb on - strand at 4552.807 kb on + strand at 4552.811 kb on + strand at 4552.815 kb on - strand at 4552.822 kb on + strand at 4552.822 kb on + strand at 4552.831 kb on + strand at 4552.841 kb on + strand at 4552.841 kb on + strand at 4552.869 kb on - strand at 4552.899 kb on - strand at 4552.916 kb on + strand at 4552.917 kb on + strand at 4552.922 kb on + strand at 4552.924 kb on + strand at 4552.924 kb on + strand at 4552.924 kb on + strand at 4552.932 kb on + strand at 4552.932 kb on - strand at 4552.932 kb on - strand at 4552.932 kb on - strand at 4552.939 kb on + strand at 4552.949 kb on - strand at 4552.951 kb on + strand at 4552.964 kb on + strand at 4552.975 kb on + strand at 4552.988 kb on - strand at 4553.038 kb on + strand at 4553.208 kb on - strand at 4553.208 kb on - strand, within BWI76_RS21790 at 4553.265 kb on - strand, within BWI76_RS21790 at 4553.270 kb on - strand, within BWI76_RS21790 at 4553.666 kb on - strand, within BWI76_RS21795 at 4553.712 kb on + strand, within BWI76_RS21795 at 4553.845 kb on - strand, within BWI76_RS21795 at 4553.929 kb on - strand, within BWI76_RS21795 at 4553.967 kb on + strand, within BWI76_RS21795 at 4553.975 kb on - strand, within BWI76_RS21795 at 4554.062 kb on + strand at 4554.107 kb on - strand at 4554.107 kb on - strand at 4554.210 kb on + strand at 4554.328 kb on - strand at 4554.333 kb on - strand at 4554.335 kb on - strand at 4554.338 kb on + strand at 4554.338 kb on - strand at 4554.340 kb on - strand at 4554.340 kb on - strand at 4554.340 kb on - strand at 4554.346 kb on - strand at 4554.346 kb on - strand at 4554.455 kb on + strand at 4554.477 kb on - strand at 4554.675 kb on - strand, within BWI76_RS21800 at 4554.726 kb on + strand, within BWI76_RS21800 at 4554.726 kb on + strand, within BWI76_RS21800 at 4554.736 kb on - strand, within BWI76_RS21800 at 4554.741 kb on - strand, within BWI76_RS21800 at 4554.751 kb on + strand at 4554.759 kb on - strand, within BWI76_RS21800 at 4554.759 kb on - strand, within BWI76_RS21800 at 4554.759 kb on - strand, within BWI76_RS21800 at 4554.773 kb on - strand, within BWI76_RS21800 at 4555.013 kb on - strand, within BWI76_RS21800 at 4555.016 kb on - strand at 4555.029 kb on - strand, within BWI76_RS21800 at 4555.044 kb on - strand, within BWI76_RS21800 at 4555.045 kb on - strand, within BWI76_RS21800 at 4555.046 kb on + strand, within BWI76_RS21800 at 4555.054 kb on - strand, within BWI76_RS21800 at 4555.054 kb on - strand, within BWI76_RS21800 at 4555.054 kb on - strand, within BWI76_RS21800
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 4,552,484 - BWI76_RS21785 0.58 +0.5 4,552,497 + BWI76_RS21785 0.60 -0.1 4,552,516 + BWI76_RS21785 0.63 -0.5 4,552,524 - BWI76_RS21785 0.65 -0.1 4,552,565 + BWI76_RS21785 0.71 -1.3 4,552,566 + BWI76_RS21785 0.72 +0.1 4,552,568 - BWI76_RS21785 0.72 +2.5 4,552,573 - BWI76_RS21785 0.73 +1.6 4,552,578 - BWI76_RS21785 0.74 -1.6 4,552,682 - -0.4 4,552,686 + -3.2 4,552,707 + -3.2 4,552,723 - +0.5 4,552,738 - -0.4 4,552,739 + +0.9 4,552,749 + -2.5 4,552,755 + -0.0 4,552,755 + -1.5 4,552,756 - -2.0 4,552,763 - +0.1 4,552,770 + -0.5 4,552,770 + -0.3 4,552,770 + -3.4 4,552,770 + -0.0 4,552,770 + -3.0 4,552,770 + +1.2 4,552,770 + -0.3 4,552,770 + +0.8 4,552,770 + -0.9 4,552,770 + +0.8 4,552,770 + -0.7 4,552,770 + -0.9 4,552,770 + +1.4 4,552,770 + +0.6 4,552,770 + -0.6 4,552,770 + -0.7 4,552,778 - -2.1 4,552,778 - -1.4 4,552,778 - +1.2 4,552,778 - +0.2 4,552,778 - -0.9 4,552,778 - -0.5 4,552,778 - -0.2 4,552,778 - +0.4 4,552,778 - +0.1 4,552,778 - +2.1 4,552,778 - -0.7 4,552,778 - -0.9 4,552,778 - +0.5 4,552,778 - -0.3 4,552,778 - -1.1 4,552,788 - +1.9 4,552,788 - -2.7 4,552,789 - +0.8 4,552,807 + +0.6 4,552,811 + +0.9 4,552,815 - -2.0 4,552,822 + +0.5 4,552,822 + +0.2 4,552,831 + +0.5 4,552,841 + -1.1 4,552,841 + +0.4 4,552,869 - -0.7 4,552,899 - -1.8 4,552,916 + -1.5 4,552,917 + -0.5 4,552,922 + +2.7 4,552,924 + +0.5 4,552,924 + -0.1 4,552,924 + -0.2 4,552,932 + +0.5 4,552,932 - -1.5 4,552,932 - -2.3 4,552,932 - +1.6 4,552,939 + +0.8 4,552,949 - -2.8 4,552,951 + +2.6 4,552,964 + +0.1 4,552,975 + -0.1 4,552,988 - +1.7 4,553,038 + +2.2 4,553,208 - -0.3 4,553,208 - BWI76_RS21790 0.37 -0.0 4,553,265 - BWI76_RS21790 0.54 +0.5 4,553,270 - BWI76_RS21790 0.56 +0.7 4,553,666 - BWI76_RS21795 0.36 -0.5 4,553,712 + BWI76_RS21795 0.42 -1.6 4,553,845 - BWI76_RS21795 0.62 -1.1 4,553,929 - BWI76_RS21795 0.74 +0.5 4,553,967 + BWI76_RS21795 0.79 -2.8 4,553,975 - BWI76_RS21795 0.80 -0.4 4,554,062 + -0.9 4,554,107 - +1.1 4,554,107 - +0.5 4,554,210 + +1.1 4,554,328 - -0.0 4,554,333 - -1.1 4,554,335 - +0.6 4,554,338 + +0.3 4,554,338 - +0.2 4,554,340 - +0.5 4,554,340 - +1.9 4,554,340 - -1.8 4,554,346 - +2.1 4,554,346 - -1.9 4,554,455 + +0.9 4,554,477 - +0.2 4,554,675 - BWI76_RS21800 0.20 +1.2 4,554,726 + BWI76_RS21800 0.25 -0.7 4,554,726 + BWI76_RS21800 0.25 -0.9 4,554,736 - BWI76_RS21800 0.26 +4.0 4,554,741 - BWI76_RS21800 0.27 -1.4 4,554,751 + +1.1 4,554,759 - BWI76_RS21800 0.28 -0.2 4,554,759 - BWI76_RS21800 0.28 +0.9 4,554,759 - BWI76_RS21800 0.28 +3.7 4,554,773 - BWI76_RS21800 0.30 -0.9 4,555,013 - BWI76_RS21800 0.52 +0.3 4,555,016 - +0.1 4,555,029 - BWI76_RS21800 0.54 -1.9 4,555,044 - BWI76_RS21800 0.55 -0.3 4,555,045 - BWI76_RS21800 0.55 +0.5 4,555,046 + BWI76_RS21800 0.56 +0.2 4,555,054 - BWI76_RS21800 0.56 +0.1 4,555,054 - BWI76_RS21800 0.56 +1.2 4,555,054 - BWI76_RS21800 0.56 -2.3
Or see this region's nucleotide sequence