Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19560 and BWI76_RS19565 are separated by 152 nucleotides BWI76_RS19565 and BWI76_RS19570 are separated by 200 nucleotides
BWI76_RS19560: BWI76_RS19560 - beta-1,4-xylanase, at 4,089,668 to 4,090,501
_RS19560
BWI76_RS19565: BWI76_RS19565 - tRNA dihydrouridine(16) synthase DusC, at 4,090,654 to 4,091,592
_RS19565
BWI76_RS19570: BWI76_RS19570 - 3-hydroxybenzoate 6-hydroxylase, at 4,091,793 to 4,092,986
_RS19570
Position (kb)
4090
4091
4092 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4089.782 kb on + strand, within BWI76_RS19560 at 4089.866 kb on - strand, within BWI76_RS19560 at 4089.985 kb on - strand, within BWI76_RS19560 at 4090.013 kb on - strand, within BWI76_RS19560 at 4090.071 kb on - strand, within BWI76_RS19560 at 4090.120 kb on + strand, within BWI76_RS19560 at 4090.156 kb on - strand, within BWI76_RS19560 at 4090.224 kb on - strand, within BWI76_RS19560 at 4090.303 kb on + strand, within BWI76_RS19560 at 4090.432 kb on - strand at 4090.436 kb on - strand at 4090.596 kb on - strand at 4090.715 kb on + strand at 4090.723 kb on - strand at 4090.723 kb on - strand at 4090.733 kb on + strand at 4090.856 kb on - strand, within BWI76_RS19565 at 4090.858 kb on + strand, within BWI76_RS19565 at 4090.906 kb on + strand, within BWI76_RS19565 at 4091.197 kb on + strand, within BWI76_RS19565 at 4091.311 kb on - strand, within BWI76_RS19565 at 4091.436 kb on + strand, within BWI76_RS19565 at 4091.444 kb on - strand, within BWI76_RS19565 at 4091.636 kb on + strand at 4091.799 kb on - strand at 4091.872 kb on - strand at 4091.988 kb on - strand, within BWI76_RS19570 at 4091.990 kb on - strand, within BWI76_RS19570 at 4092.031 kb on + strand, within BWI76_RS19570 at 4092.062 kb on - strand, within BWI76_RS19570 at 4092.084 kb on + strand, within BWI76_RS19570 at 4092.087 kb on - strand, within BWI76_RS19570
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 4,089,782 + BWI76_RS19560 0.14 -0.8 4,089,866 - BWI76_RS19560 0.24 -1.6 4,089,985 - BWI76_RS19560 0.38 +0.5 4,090,013 - BWI76_RS19560 0.41 +0.6 4,090,071 - BWI76_RS19560 0.48 +0.7 4,090,120 + BWI76_RS19560 0.54 -0.2 4,090,156 - BWI76_RS19560 0.59 -0.4 4,090,224 - BWI76_RS19560 0.67 +0.1 4,090,303 + BWI76_RS19560 0.76 -0.5 4,090,432 - -0.0 4,090,436 - -0.3 4,090,596 - +0.4 4,090,715 + -0.6 4,090,723 - -0.8 4,090,723 - -0.4 4,090,733 + +0.0 4,090,856 - BWI76_RS19565 0.22 -1.2 4,090,858 + BWI76_RS19565 0.22 -1.6 4,090,906 + BWI76_RS19565 0.27 -1.8 4,091,197 + BWI76_RS19565 0.58 -0.1 4,091,311 - BWI76_RS19565 0.70 -0.1 4,091,436 + BWI76_RS19565 0.83 -0.4 4,091,444 - BWI76_RS19565 0.84 +0.1 4,091,636 + -1.2 4,091,799 - +0.4 4,091,872 - +0.0 4,091,988 - BWI76_RS19570 0.16 -1.2 4,091,990 - BWI76_RS19570 0.16 +0.0 4,092,031 + BWI76_RS19570 0.20 +0.1 4,092,062 - BWI76_RS19570 0.23 -0.5 4,092,084 + BWI76_RS19570 0.24 +2.6 4,092,087 - BWI76_RS19570 0.25 -1.8
Or see this region's nucleotide sequence