Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17835 and BWI76_RS17840 are separated by 9 nucleotides BWI76_RS17840 and BWI76_RS17845 are separated by 11 nucleotides BWI76_RS17845 and BWI76_RS17850 are separated by 525 nucleotides
BWI76_RS17835: BWI76_RS17835 - sugar ABC transporter permease, at 3,707,218 to 3,708,057
_RS17835
BWI76_RS17840: BWI76_RS17840 - sugar ABC transporter permease, at 3,708,067 to 3,709,008
_RS17840
BWI76_RS17845: BWI76_RS17845 - extracellular solute-binding protein, at 3,709,020 to 3,710,309
_RS17845
BWI76_RS17850: BWI76_RS17850 - alginate lyase, at 3,710,835 to 3,712,073
_RS17850
Position (kb)
3709
3710
3711 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3708.210 kb on + strand, within BWI76_RS17840 at 3708.218 kb on + strand, within BWI76_RS17840 at 3708.297 kb on - strand, within BWI76_RS17840 at 3708.516 kb on + strand, within BWI76_RS17840 at 3708.659 kb on + strand, within BWI76_RS17840 at 3708.719 kb on + strand, within BWI76_RS17840 at 3708.761 kb on - strand, within BWI76_RS17840 at 3708.797 kb on - strand, within BWI76_RS17840 at 3708.797 kb on - strand, within BWI76_RS17840 at 3708.923 kb on + strand at 3709.330 kb on - strand, within BWI76_RS17845 at 3709.423 kb on + strand, within BWI76_RS17845 at 3709.431 kb on - strand, within BWI76_RS17845 at 3709.431 kb on - strand, within BWI76_RS17845 at 3709.431 kb on - strand, within BWI76_RS17845 at 3709.458 kb on + strand, within BWI76_RS17845 at 3709.469 kb on + strand, within BWI76_RS17845 at 3709.472 kb on - strand, within BWI76_RS17845 at 3709.504 kb on + strand, within BWI76_RS17845 at 3709.953 kb on + strand, within BWI76_RS17845 at 3709.961 kb on - strand, within BWI76_RS17845 at 3710.027 kb on - strand, within BWI76_RS17845 at 3710.108 kb on + strand, within BWI76_RS17845 at 3710.116 kb on - strand, within BWI76_RS17845 at 3710.214 kb on + strand at 3710.214 kb on + strand at 3710.214 kb on + strand at 3710.223 kb on + strand at 3710.230 kb on - strand at 3710.231 kb on - strand at 3710.239 kb on + strand at 3710.249 kb on + strand at 3710.249 kb on + strand at 3710.249 kb on + strand at 3710.249 kb on + strand at 3710.252 kb on - strand at 3710.252 kb on - strand at 3710.252 kb on - strand at 3710.255 kb on + strand at 3710.255 kb on + strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.257 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.263 kb on - strand at 3710.307 kb on + strand at 3710.307 kb on + strand at 3710.313 kb on - strand at 3710.385 kb on + strand at 3710.701 kb on + strand at 3710.701 kb on + strand at 3710.709 kb on - strand at 3710.818 kb on + strand at 3710.833 kb on - strand at 3710.839 kb on + strand at 3710.839 kb on + strand at 3710.839 kb on + strand at 3710.839 kb on + strand at 3710.847 kb on - strand at 3710.847 kb on - strand at 3710.847 kb on - strand at 3710.847 kb on - strand at 3710.847 kb on - strand at 3710.847 kb on - strand at 3710.848 kb on - strand at 3710.857 kb on - strand at 3710.859 kb on + strand at 3710.861 kb on + strand at 3710.867 kb on - strand at 3710.869 kb on - strand at 3710.871 kb on + strand at 3710.876 kb on + strand at 3710.876 kb on + strand at 3710.879 kb on - strand at 3710.911 kb on - strand at 3710.921 kb on - strand at 3710.923 kb on + strand at 3710.923 kb on - strand at 3711.132 kb on + strand, within BWI76_RS17850 at 3711.133 kb on - strand, within BWI76_RS17850 at 3711.135 kb on - strand, within BWI76_RS17850 at 3711.142 kb on + strand, within BWI76_RS17850 at 3711.308 kb on + strand, within BWI76_RS17850
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 3,708,210 + BWI76_RS17840 0.15 +0.6 3,708,218 + BWI76_RS17840 0.16 +0.7 3,708,297 - BWI76_RS17840 0.24 +1.0 3,708,516 + BWI76_RS17840 0.48 -0.1 3,708,659 + BWI76_RS17840 0.63 +0.2 3,708,719 + BWI76_RS17840 0.69 +1.7 3,708,761 - BWI76_RS17840 0.74 -0.2 3,708,797 - BWI76_RS17840 0.77 -0.1 3,708,797 - BWI76_RS17840 0.77 -0.2 3,708,923 + -1.7 3,709,330 - BWI76_RS17845 0.24 +4.4 3,709,423 + BWI76_RS17845 0.31 +0.8 3,709,431 - BWI76_RS17845 0.32 +1.5 3,709,431 - BWI76_RS17845 0.32 +0.7 3,709,431 - BWI76_RS17845 0.32 -0.9 3,709,458 + BWI76_RS17845 0.34 +0.6 3,709,469 + BWI76_RS17845 0.35 +0.0 3,709,472 - BWI76_RS17845 0.35 +0.5 3,709,504 + BWI76_RS17845 0.38 -0.1 3,709,953 + BWI76_RS17845 0.72 +0.3 3,709,961 - BWI76_RS17845 0.73 -0.1 3,710,027 - BWI76_RS17845 0.78 -0.1 3,710,108 + BWI76_RS17845 0.84 -0.6 3,710,116 - BWI76_RS17845 0.85 +0.3 3,710,214 + +0.7 3,710,214 + +2.1 3,710,214 + -1.3 3,710,223 + +1.0 3,710,230 - -3.5 3,710,231 - +0.2 3,710,239 + -2.3 3,710,249 + +0.2 3,710,249 + -0.9 3,710,249 + +2.0 3,710,249 + +0.1 3,710,252 - -1.7 3,710,252 - +0.2 3,710,252 - -2.3 3,710,255 + -0.6 3,710,255 + -0.6 3,710,257 - -2.7 3,710,257 - -0.9 3,710,257 - +0.4 3,710,257 - +2.2 3,710,257 - -2.1 3,710,257 - -0.1 3,710,257 - -0.9 3,710,257 - -0.0 3,710,257 - -0.1 3,710,257 - -2.3 3,710,257 - -0.1 3,710,257 - -0.0 3,710,257 - -0.3 3,710,257 - +1.2 3,710,263 - +0.1 3,710,263 - -0.9 3,710,263 - +0.2 3,710,263 - -3.0 3,710,263 - -0.0 3,710,263 - +0.1 3,710,263 - -1.9 3,710,263 - -0.9 3,710,307 + +0.4 3,710,307 + +2.0 3,710,313 - +0.9 3,710,385 + -0.0 3,710,701 + -2.5 3,710,701 + +0.6 3,710,709 - +0.8 3,710,818 + -0.6 3,710,833 - +0.4 3,710,839 + -1.0 3,710,839 + +0.7 3,710,839 + +0.2 3,710,839 + +1.0 3,710,847 - -0.4 3,710,847 - +1.4 3,710,847 - +0.6 3,710,847 - -0.4 3,710,847 - -2.0 3,710,847 - -0.5 3,710,848 - -0.3 3,710,857 - +1.4 3,710,859 + +1.2 3,710,861 + +2.1 3,710,867 - -0.0 3,710,869 - -0.8 3,710,871 + +0.9 3,710,876 + +1.5 3,710,876 + -1.9 3,710,879 - -0.3 3,710,911 - +4.0 3,710,921 - -1.9 3,710,923 + -1.1 3,710,923 - -0.4 3,711,132 + BWI76_RS17850 0.24 -0.6 3,711,133 - BWI76_RS17850 0.24 -1.3 3,711,135 - BWI76_RS17850 0.24 +0.8 3,711,142 + BWI76_RS17850 0.25 -1.0 3,711,308 + BWI76_RS17850 0.38 +0.1
Or see this region's nucleotide sequence