Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04450 and BWI76_RS04455 are separated by 19 nucleotides BWI76_RS04455 and BWI76_RS04460 are separated by 247 nucleotides
BWI76_RS04450: BWI76_RS04450 - citrate lyase subunit alpha, at 918,565 to 920,091
_RS04450
BWI76_RS04455: BWI76_RS04455 - triphosphoribosyl-dephospho-CoA synthase CitG, at 920,111 to 921,019
_RS04455
BWI76_RS04460: BWI76_RS04460 - 4-hydroxy-tetrahydrodipicolinate reductase, at 921,267 to 922,088
_RS04460
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1
2 at 919.454 kb on + strand, within BWI76_RS04450 at 919.509 kb on + strand, within BWI76_RS04450 at 919.529 kb on - strand, within BWI76_RS04450 at 919.639 kb on + strand, within BWI76_RS04450 at 920.000 kb on - strand at 920.081 kb on - strand at 920.159 kb on - strand at 920.251 kb on + strand, within BWI76_RS04455 at 920.281 kb on - strand, within BWI76_RS04455 at 920.283 kb on + strand, within BWI76_RS04455 at 920.350 kb on + strand, within BWI76_RS04455 at 920.372 kb on - strand, within BWI76_RS04455 at 920.479 kb on - strand, within BWI76_RS04455 at 920.497 kb on - strand, within BWI76_RS04455 at 920.689 kb on + strand, within BWI76_RS04455 at 920.728 kb on + strand, within BWI76_RS04455 at 920.873 kb on + strand, within BWI76_RS04455 at 920.952 kb on + strand at 921.142 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 919,454 + BWI76_RS04450 0.58 +0.6 919,509 + BWI76_RS04450 0.62 +0.7 919,529 - BWI76_RS04450 0.63 -0.3 919,639 + BWI76_RS04450 0.70 +1.8 920,000 - +0.1 920,081 - -0.2 920,159 - +0.3 920,251 + BWI76_RS04455 0.15 -0.7 920,281 - BWI76_RS04455 0.19 +0.7 920,283 + BWI76_RS04455 0.19 +0.3 920,350 + BWI76_RS04455 0.26 -2.2 920,372 - BWI76_RS04455 0.29 -1.8 920,479 - BWI76_RS04455 0.40 -0.2 920,497 - BWI76_RS04455 0.42 -1.7 920,689 + BWI76_RS04455 0.64 -2.3 920,728 + BWI76_RS04455 0.68 -0.2 920,873 + BWI76_RS04455 0.84 -0.2 920,952 + -0.8 921,142 - -0.1
Or see this region's nucleotide sequence