Experiment: 10 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2566 and DvMF_2567 are separated by 8 nucleotides DvMF_2567 and DvMF_2568 are separated by 97 nucleotides
DvMF_2566: DvMF_2566 - phosphate ABC transporter, inner membrane subunit PstC (RefSeq), at 3,243,276 to 3,244,520
_2566
DvMF_2567: DvMF_2567 - phosphate ABC transporter, inner membrane subunit PstA (RefSeq), at 3,244,529 to 3,245,698
_2567
DvMF_2568: DvMF_2568 - filamentation induced by cAMP protein Fic (RefSeq), at 3,245,796 to 3,247,028
_2568
Position (kb)
3244
3245
3246 Strain fitness (log2 ratio)
-1
0
1
2 at 3243.610 kb on - strand, within DvMF_2566 at 3243.637 kb on - strand, within DvMF_2566 at 3243.637 kb on - strand, within DvMF_2566 at 3243.898 kb on - strand, within DvMF_2566 at 3243.984 kb on + strand, within DvMF_2566 at 3243.992 kb on - strand, within DvMF_2566 at 3244.116 kb on - strand, within DvMF_2566 at 3244.192 kb on - strand, within DvMF_2566 at 3244.238 kb on - strand, within DvMF_2566 at 3244.351 kb on + strand, within DvMF_2566 at 3244.466 kb on + strand at 3244.730 kb on + strand, within DvMF_2567 at 3244.735 kb on + strand, within DvMF_2567 at 3244.749 kb on - strand, within DvMF_2567 at 3244.834 kb on + strand, within DvMF_2567 at 3244.869 kb on + strand, within DvMF_2567 at 3244.909 kb on + strand, within DvMF_2567 at 3244.941 kb on - strand, within DvMF_2567 at 3244.970 kb on + strand, within DvMF_2567 at 3245.001 kb on + strand, within DvMF_2567 at 3245.268 kb on + strand, within DvMF_2567 at 3245.460 kb on - strand, within DvMF_2567 at 3245.653 kb on + strand at 3245.791 kb on + strand at 3245.855 kb on + strand at 3245.855 kb on + strand at 3245.878 kb on - strand at 3245.915 kb on - strand at 3245.977 kb on - strand, within DvMF_2568 at 3246.247 kb on + strand, within DvMF_2568 at 3246.516 kb on + strand, within DvMF_2568 at 3246.630 kb on - strand, within DvMF_2568
Per-strain Table
Position Strand Gene LocusTag Fraction 10 day starvation, 30C remove 3,243,610 - DvMF_2566 0.27 +0.6 3,243,637 - DvMF_2566 0.29 +0.7 3,243,637 - DvMF_2566 0.29 +0.4 3,243,898 - DvMF_2566 0.50 -0.1 3,243,984 + DvMF_2566 0.57 +1.0 3,243,992 - DvMF_2566 0.58 +0.5 3,244,116 - DvMF_2566 0.67 +0.4 3,244,192 - DvMF_2566 0.74 +0.5 3,244,238 - DvMF_2566 0.77 +0.6 3,244,351 + DvMF_2566 0.86 +0.4 3,244,466 + +0.9 3,244,730 + DvMF_2567 0.17 +0.6 3,244,735 + DvMF_2567 0.18 +0.9 3,244,749 - DvMF_2567 0.19 +1.1 3,244,834 + DvMF_2567 0.26 +0.8 3,244,869 + DvMF_2567 0.29 +0.9 3,244,909 + DvMF_2567 0.32 +0.5 3,244,941 - DvMF_2567 0.35 +1.8 3,244,970 + DvMF_2567 0.38 +0.7 3,245,001 + DvMF_2567 0.40 +1.2 3,245,268 + DvMF_2567 0.63 +0.5 3,245,460 - DvMF_2567 0.80 +0.6 3,245,653 + +0.9 3,245,791 + +0.3 3,245,855 + +1.1 3,245,855 + +0.6 3,245,878 - +0.2 3,245,915 - +0.0 3,245,977 - DvMF_2568 0.15 +0.5 3,246,247 + DvMF_2568 0.37 +0.2 3,246,516 + DvMF_2568 0.58 +1.3 3,246,630 - DvMF_2568 0.68 +0.3
Or see this region's nucleotide sequence