Experiment: 10 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1630 and DvMF_1631 are separated by 349 nucleotides DvMF_1631 and DvMF_1632 overlap by 4 nucleotides
DvMF_1630: DvMF_1630 - protein of unknown function DUF214 (RefSeq), at 2,009,359 to 2,010,507
_1630
DvMF_1631: DvMF_1631 - two component transcriptional regulator, winged helix family (RefSeq), at 2,010,857 to 2,011,684
_1631
DvMF_1632: DvMF_1632 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,011,681 to 2,013,288
_1632
Position (kb)
2010
2011
2012 Strain fitness (log2 ratio)
-1
0
1 at 2009.863 kb on - strand, within DvMF_1630 at 2009.865 kb on + strand, within DvMF_1630 at 2009.921 kb on + strand, within DvMF_1630 at 2010.724 kb on + strand at 2010.864 kb on + strand at 2010.872 kb on - strand at 2010.872 kb on - strand at 2010.874 kb on + strand at 2010.921 kb on - strand at 2011.028 kb on - strand, within DvMF_1631 at 2011.028 kb on - strand, within DvMF_1631 at 2011.044 kb on + strand, within DvMF_1631 at 2011.208 kb on + strand, within DvMF_1631 at 2011.216 kb on - strand, within DvMF_1631 at 2011.433 kb on + strand, within DvMF_1631 at 2011.473 kb on - strand, within DvMF_1631 at 2011.783 kb on - strand at 2011.835 kb on - strand at 2011.987 kb on - strand, within DvMF_1632 at 2012.061 kb on + strand, within DvMF_1632 at 2012.102 kb on + strand, within DvMF_1632 at 2012.219 kb on + strand, within DvMF_1632 at 2012.328 kb on - strand, within DvMF_1632 at 2012.335 kb on - strand, within DvMF_1632 at 2012.657 kb on + strand, within DvMF_1632
Per-strain Table
Position Strand Gene LocusTag Fraction 10 day starvation, 30C remove 2,009,863 - DvMF_1630 0.44 +0.6 2,009,865 + DvMF_1630 0.44 +0.3 2,009,921 + DvMF_1630 0.49 +1.3 2,010,724 + +1.0 2,010,864 + -0.3 2,010,872 - +0.5 2,010,872 - +0.7 2,010,874 + +1.0 2,010,921 - +0.1 2,011,028 - DvMF_1631 0.21 +0.3 2,011,028 - DvMF_1631 0.21 +0.5 2,011,044 + DvMF_1631 0.23 +0.9 2,011,208 + DvMF_1631 0.42 +1.1 2,011,216 - DvMF_1631 0.43 +0.9 2,011,433 + DvMF_1631 0.70 +0.7 2,011,473 - DvMF_1631 0.74 +0.6 2,011,783 - -0.1 2,011,835 - +1.0 2,011,987 - DvMF_1632 0.19 +0.7 2,012,061 + DvMF_1632 0.24 +0.7 2,012,102 + DvMF_1632 0.26 +0.4 2,012,219 + DvMF_1632 0.33 +0.8 2,012,328 - DvMF_1632 0.40 +0.0 2,012,335 - DvMF_1632 0.41 +1.0 2,012,657 + DvMF_1632 0.61 +0.2
Or see this region's nucleotide sequence