Experiment: m.b. D-Cycloserine 0.048 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1371 and Dshi_1372 are separated by 12 nucleotides Dshi_1372 and Dshi_1373 overlap by 4 nucleotides Dshi_1373 and Dshi_1374 are separated by 273 nucleotides
Dshi_1371: Dshi_1371 - ABC transporter related (RefSeq), at 1,424,219 to 1,425,220
_1371
Dshi_1372: Dshi_1372 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,425,233 to 1,426,150
_1372
Dshi_1373: Dshi_1373 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,426,147 to 1,427,058
_1373
Dshi_1374: Dshi_1374 - NMT1/THI5 like domain protein (RefSeq), at 1,427,332 to 1,428,321
_1374
Position (kb)
1426
1427
1428 Strain fitness (log2 ratio)
-2
-1
0
1 at 1425.244 kb on - strand at 1425.318 kb on - strand at 1425.325 kb on + strand, within Dshi_1372 at 1425.631 kb on - strand, within Dshi_1372 at 1425.827 kb on - strand, within Dshi_1372 at 1425.841 kb on - strand, within Dshi_1372 at 1425.852 kb on + strand, within Dshi_1372 at 1425.860 kb on - strand, within Dshi_1372 at 1426.040 kb on + strand, within Dshi_1372 at 1426.368 kb on + strand, within Dshi_1373 at 1426.376 kb on - strand, within Dshi_1373 at 1426.515 kb on - strand, within Dshi_1373 at 1426.698 kb on - strand, within Dshi_1373 at 1426.721 kb on + strand, within Dshi_1373 at 1426.797 kb on + strand, within Dshi_1373 at 1426.844 kb on + strand, within Dshi_1373 at 1426.849 kb on + strand, within Dshi_1373 at 1426.875 kb on + strand, within Dshi_1373 at 1426.967 kb on - strand at 1427.034 kb on + strand at 1427.124 kb on + strand at 1427.148 kb on + strand at 1427.185 kb on + strand at 1427.229 kb on + strand at 1427.359 kb on - strand at 1427.402 kb on + strand at 1427.436 kb on - strand, within Dshi_1374 at 1427.472 kb on + strand, within Dshi_1374 at 1427.674 kb on - strand, within Dshi_1374 at 1427.805 kb on + strand, within Dshi_1374 at 1427.919 kb on - strand, within Dshi_1374 at 1428.013 kb on + strand, within Dshi_1374
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.048 mg/ml remove 1,425,244 - -1.6 1,425,318 - -0.5 1,425,325 + Dshi_1372 0.10 -0.2 1,425,631 - Dshi_1372 0.43 -0.0 1,425,827 - Dshi_1372 0.65 -0.1 1,425,841 - Dshi_1372 0.66 -2.1 1,425,852 + Dshi_1372 0.67 -0.4 1,425,860 - Dshi_1372 0.68 -0.7 1,426,040 + Dshi_1372 0.88 -0.0 1,426,368 + Dshi_1373 0.24 -0.1 1,426,376 - Dshi_1373 0.25 -0.1 1,426,515 - Dshi_1373 0.40 -0.9 1,426,698 - Dshi_1373 0.60 -0.1 1,426,721 + Dshi_1373 0.63 +0.2 1,426,797 + Dshi_1373 0.71 +0.9 1,426,844 + Dshi_1373 0.76 +0.0 1,426,849 + Dshi_1373 0.77 +1.3 1,426,875 + Dshi_1373 0.80 -0.6 1,426,967 - -0.5 1,427,034 + -0.3 1,427,124 + -1.0 1,427,148 + -1.0 1,427,185 + -0.7 1,427,229 + -1.1 1,427,359 - +0.9 1,427,402 + -0.7 1,427,436 - Dshi_1374 0.11 +1.3 1,427,472 + Dshi_1374 0.14 +0.4 1,427,674 - Dshi_1374 0.35 +0.2 1,427,805 + Dshi_1374 0.48 +0.1 1,427,919 - Dshi_1374 0.59 +0.4 1,428,013 + Dshi_1374 0.69 -0.5
Or see this region's nucleotide sequence