Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1370
Experiment: m.b. D-Cycloserine 0.048 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. D-Cycloserine 0.048 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,421,767 | - | Dshi_1368 | 0.38 | -1.4 | |
1,421,819 | + | Dshi_1368 | 0.56 | -0.4 | |
1,421,979 | + | -1.0 | |||
1,422,372 | + | Dshi_1369 | 0.54 | -0.3 | |
1,422,491 | + | Dshi_1369 | 0.70 | -1.1 | |
1,422,632 | + | Dshi_1369 | 0.89 | -0.2 | |
1,423,033 | + | Dshi_1370 | 0.19 | -1.9 | |
1,423,046 | - | Dshi_1370 | 0.20 | -0.9 | |
1,423,062 | - | Dshi_1370 | 0.21 | -0.2 | |
1,423,218 | + | Dshi_1370 | 0.32 | -1.2 | |
1,423,374 | + | Dshi_1370 | 0.42 | -0.5 | |
1,423,386 | + | Dshi_1370 | 0.43 | -0.9 | |
1,423,440 | - | Dshi_1370 | 0.47 | -0.8 | |
1,423,519 | + | Dshi_1370 | 0.52 | +2.4 | |
1,423,527 | - | Dshi_1370 | 0.53 | -0.6 | |
1,423,634 | + | Dshi_1370 | 0.60 | -1.9 | |
1,423,641 | - | Dshi_1370 | 0.61 | -1.2 | |
1,423,642 | - | Dshi_1370 | 0.61 | -1.4 | |
1,423,655 | + | Dshi_1370 | 0.62 | -0.8 | |
1,424,046 | - | Dshi_1370 | 0.89 | -1.0 | |
1,424,153 | + | -1.1 | |||
1,424,297 | - | -0.1 | |||
1,424,469 | + | Dshi_1371 | 0.25 | -0.1 | |
1,424,648 | - | Dshi_1371 | 0.43 | -1.6 | |
1,424,737 | + | Dshi_1371 | 0.52 | -1.3 | |
1,424,770 | + | Dshi_1371 | 0.55 | +0.1 | |
1,424,857 | + | Dshi_1371 | 0.64 | -1.0 | |
1,424,976 | - | Dshi_1371 | 0.76 | +0.6 | |
1,425,123 | + | -0.3 |
Or see this region's nucleotide sequence