Experiment: m.b. D-Cycloserine 0.048 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0749 and Dshi_0750 are separated by 658 nucleotides
Dshi_0749: Dshi_0749 - DNA topoisomerase IV, B subunit (RefSeq), at 758,372 to 760,336
_0749
Dshi_0750: Dshi_0750 - hypothetical protein (RefSeq), at 760,995 to 761,789
_0750
Position (kb) 758
759
760
761 Strain fitness (log2 ratio) -2
-1
0
1
2 at 757.637 kb on - strand at 757.692 kb on - strand at 757.715 kb on - strand at 757.715 kb on - strand at 757.715 kb on - strand at 757.737 kb on - strand at 757.746 kb on + strand at 757.746 kb on + strand at 757.752 kb on + strand at 757.754 kb on - strand at 757.754 kb on - strand at 757.754 kb on - strand at 757.754 kb on - strand at 757.771 kb on - strand at 757.773 kb on + strand at 757.780 kb on - strand at 757.781 kb on - strand at 757.783 kb on + strand at 757.791 kb on - strand at 757.792 kb on + strand at 757.794 kb on + strand at 757.795 kb on - strand at 757.796 kb on + strand at 757.804 kb on - strand at 757.806 kb on + strand at 757.806 kb on + strand at 757.806 kb on + strand at 757.806 kb on + strand at 757.806 kb on + strand at 757.806 kb on + strand at 757.811 kb on + strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.814 kb on - strand at 757.817 kb on + strand at 757.817 kb on + strand at 757.819 kb on - strand at 757.821 kb on + strand at 757.825 kb on - strand at 757.825 kb on - strand at 757.829 kb on - strand at 757.846 kb on - strand at 757.866 kb on + strand at 757.876 kb on + strand at 757.876 kb on + strand at 757.876 kb on + strand at 757.884 kb on + strand at 757.884 kb on - strand at 757.884 kb on - strand at 757.884 kb on - strand at 757.884 kb on - strand at 757.884 kb on - strand at 757.884 kb on - strand at 757.884 kb on - strand at 757.885 kb on - strand at 757.892 kb on - strand at 757.895 kb on - strand at 757.898 kb on - strand at 757.915 kb on + strand at 757.937 kb on + strand at 757.937 kb on + strand at 757.937 kb on + strand at 757.945 kb on - strand at 757.945 kb on - strand at 757.960 kb on - strand at 757.977 kb on - strand at 757.977 kb on - strand at 757.987 kb on + strand at 757.987 kb on - strand at 757.991 kb on + strand at 757.993 kb on + strand at 757.993 kb on + strand at 758.007 kb on + strand at 758.007 kb on + strand at 758.007 kb on + strand at 758.011 kb on - strand at 758.015 kb on - strand at 758.015 kb on - strand at 758.016 kb on + strand at 758.016 kb on + strand at 758.016 kb on + strand at 758.016 kb on + strand at 758.016 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on + strand at 758.017 kb on - strand at 758.017 kb on - strand at 758.024 kb on - strand at 758.024 kb on - strand at 758.024 kb on - strand at 758.024 kb on - strand at 758.024 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.025 kb on - strand at 758.032 kb on + strand at 758.034 kb on - strand at 758.035 kb on - strand at 758.042 kb on + strand at 758.042 kb on + strand at 758.042 kb on + strand at 758.047 kb on - strand at 758.050 kb on + strand at 758.050 kb on - strand at 758.050 kb on - strand at 758.050 kb on - strand at 758.050 kb on - strand at 758.064 kb on - strand at 758.064 kb on - strand at 758.064 kb on - strand at 758.064 kb on - strand at 758.084 kb on + strand at 758.084 kb on + strand at 758.105 kb on - strand at 758.107 kb on + strand at 758.108 kb on - strand at 758.115 kb on - strand at 758.115 kb on - strand at 758.115 kb on - strand at 758.120 kb on - strand at 758.135 kb on - strand at 758.142 kb on + strand at 758.143 kb on + strand at 758.143 kb on + strand at 758.143 kb on - strand at 758.146 kb on - strand at 758.150 kb on - strand at 758.151 kb on - strand at 758.151 kb on - strand at 758.151 kb on - strand at 758.151 kb on - strand at 758.165 kb on - strand at 758.167 kb on + strand at 758.176 kb on + strand at 758.184 kb on - strand at 758.186 kb on - strand at 758.190 kb on + strand at 758.196 kb on - strand at 758.198 kb on + strand at 758.213 kb on - strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.244 kb on + strand at 758.247 kb on + strand at 758.247 kb on + strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.252 kb on - strand at 758.255 kb on - strand at 758.266 kb on - strand at 758.266 kb on - strand at 758.268 kb on + strand at 758.270 kb on + strand at 758.272 kb on + strand at 758.272 kb on + strand at 758.278 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.280 kb on - strand at 758.282 kb on + strand at 758.282 kb on + strand at 758.282 kb on + strand at 758.289 kb on + strand at 758.296 kb on + strand at 758.312 kb on - strand at 758.314 kb on - strand at 758.341 kb on + strand at 758.349 kb on - strand at 758.349 kb on - strand at 758.349 kb on - strand at 758.351 kb on + strand at 758.362 kb on - strand at 760.394 kb on - strand at 760.486 kb on - strand at 760.577 kb on + strand at 760.685 kb on + strand at 760.713 kb on - strand at 760.748 kb on + strand at 760.772 kb on + strand at 760.844 kb on - strand at 760.947 kb on - strand at 760.987 kb on - strand at 761.057 kb on - strand at 761.062 kb on - strand at 761.189 kb on - strand, within Dshi_0750 at 761.205 kb on + strand, within Dshi_0750 at 761.307 kb on - strand, within Dshi_0750
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.048 mg/ml remove 757,637 - -0.5 757,692 - +0.2 757,715 - -0.4 757,715 - -0.5 757,715 - -1.2 757,737 - -0.1 757,746 + +0.0 757,746 + -0.1 757,752 + -0.3 757,754 - +0.0 757,754 - -0.1 757,754 - -0.5 757,754 - -0.6 757,771 - -0.1 757,773 + +0.7 757,780 - -0.5 757,781 - -0.2 757,783 + -0.3 757,791 - -0.6 757,792 + -0.1 757,794 + -0.8 757,795 - +0.0 757,796 + -0.4 757,804 - +0.1 757,806 + +0.0 757,806 + -0.1 757,806 + -1.8 757,806 + -0.5 757,806 + +0.3 757,806 + -0.1 757,811 + +0.4 757,814 - +0.6 757,814 - -0.4 757,814 - -0.4 757,814 - -0.1 757,814 - +0.2 757,814 - -0.8 757,814 - +0.0 757,814 - -1.1 757,814 - -0.4 757,817 + -0.8 757,817 + -0.1 757,819 - -0.5 757,821 + +0.0 757,825 - -0.9 757,825 - -1.3 757,829 - +0.1 757,846 - -0.5 757,866 + -0.8 757,876 + -0.0 757,876 + +2.4 757,876 + +0.1 757,884 + -0.6 757,884 - -0.4 757,884 - +0.3 757,884 - -1.7 757,884 - -0.4 757,884 - +0.2 757,884 - -0.7 757,884 - -0.4 757,885 - -0.0 757,892 - +0.7 757,895 - -0.5 757,898 - -0.5 757,915 + -0.4 757,937 + -0.3 757,937 + -1.7 757,937 + +0.6 757,945 - -0.7 757,945 - -0.6 757,960 - +0.8 757,977 - -0.3 757,977 - +0.3 757,987 + +0.4 757,987 - +0.0 757,991 + -0.6 757,993 + -0.1 757,993 + +1.7 758,007 + +0.0 758,007 + +0.2 758,007 + +0.5 758,011 - -0.3 758,015 - -0.1 758,015 - +0.4 758,016 + -0.1 758,016 + +0.2 758,016 + +0.4 758,016 + -1.3 758,016 + -0.5 758,017 + +0.0 758,017 + -0.4 758,017 + +0.7 758,017 + +0.2 758,017 + -1.4 758,017 + -0.2 758,017 + +0.2 758,017 + -0.9 758,017 + +0.1 758,017 + +0.2 758,017 + +0.6 758,017 + +1.1 758,017 + +0.6 758,017 + +0.5 758,017 + -1.5 758,017 + -0.5 758,017 + +0.1 758,017 + +0.2 758,017 + +0.4 758,017 + +0.1 758,017 + -0.0 758,017 + +0.8 758,017 + +0.1 758,017 + +0.0 758,017 + -0.4 758,017 + +0.2 758,017 + -0.3 758,017 + -1.4 758,017 + +0.4 758,017 + +0.5 758,017 + -0.2 758,017 + +0.1 758,017 + -0.7 758,017 + +0.2 758,017 + +0.1 758,017 + -1.1 758,017 + +1.3 758,017 + -0.2 758,017 + +1.3 758,017 + -0.6 758,017 + +1.2 758,017 + -0.7 758,017 + -1.5 758,017 + -0.0 758,017 + -0.4 758,017 + -0.1 758,017 + -0.0 758,017 + -0.3 758,017 + -0.3 758,017 + -0.3 758,017 + -1.6 758,017 - -0.4 758,017 - +0.8 758,024 - -0.5 758,024 - +0.6 758,024 - +0.2 758,024 - -0.1 758,024 - -0.5 758,025 - +0.6 758,025 - +0.3 758,025 - +0.5 758,025 - -0.1 758,025 - +0.1 758,025 - -0.2 758,025 - +0.4 758,025 - +0.1 758,025 - -2.0 758,025 - -0.7 758,025 - +0.9 758,025 - +0.2 758,025 - -0.4 758,025 - -0.1 758,025 - +0.1 758,025 - -0.1 758,025 - -0.1 758,025 - +0.6 758,025 - -0.1 758,025 - +0.5 758,025 - -0.4 758,025 - +0.3 758,025 - +0.2 758,025 - -0.6 758,025 - -0.1 758,025 - -0.9 758,025 - +0.5 758,025 - -0.1 758,025 - +0.5 758,025 - -0.1 758,025 - -0.1 758,025 - +1.3 758,025 - +0.2 758,025 - +0.2 758,025 - +0.0 758,032 + +0.5 758,034 - -0.1 758,035 - +0.6 758,042 + +0.1 758,042 + -0.4 758,042 + +0.4 758,047 - -0.0 758,050 + +0.3 758,050 - +0.1 758,050 - -0.9 758,050 - -0.5 758,050 - +1.5 758,064 - +0.1 758,064 - -0.4 758,064 - +0.1 758,064 - +0.1 758,084 + -0.8 758,084 + -0.3 758,105 - +0.8 758,107 + +0.4 758,108 - -0.4 758,115 - -0.9 758,115 - +0.1 758,115 - -0.0 758,120 - -0.6 758,135 - -0.1 758,142 + -0.2 758,143 + -1.6 758,143 + +0.1 758,143 - -0.3 758,146 - -1.0 758,150 - -0.4 758,151 - +0.2 758,151 - +0.6 758,151 - +0.2 758,151 - +0.5 758,165 - -0.7 758,167 + +0.7 758,176 + -0.9 758,184 - -0.5 758,186 - +2.0 758,190 + +0.1 758,196 - +0.1 758,198 + -1.1 758,213 - -0.1 758,244 + -0.6 758,244 + -1.1 758,244 + +0.4 758,244 + +0.2 758,244 + -0.4 758,244 + +0.4 758,244 + -2.1 758,244 + -2.0 758,244 + +0.5 758,244 + +0.4 758,244 + +0.7 758,244 + +0.6 758,244 + +0.9 758,244 + +0.5 758,244 + -1.5 758,247 + -0.1 758,247 + -1.2 758,252 - -0.4 758,252 - +0.2 758,252 - +0.0 758,252 - -1.8 758,252 - -0.3 758,252 - -0.6 758,252 - -0.5 758,252 - -0.1 758,255 - +0.0 758,266 - -0.5 758,266 - -0.2 758,268 + -0.5 758,270 + -0.9 758,272 + +1.3 758,272 + +1.2 758,278 - +0.1 758,280 - -1.7 758,280 - -0.4 758,280 - -0.4 758,280 - +0.3 758,280 - -0.0 758,280 - +0.7 758,280 - +0.5 758,280 - -0.5 758,280 - -0.2 758,280 - -1.1 758,280 - -0.4 758,282 + +0.9 758,282 + +0.5 758,282 + +1.5 758,289 + -0.3 758,296 + +0.4 758,312 - +0.9 758,314 - -1.6 758,341 + -0.3 758,349 - -1.1 758,349 - +0.9 758,349 - -0.8 758,351 + +0.7 758,362 - -1.0 760,394 - -0.6 760,486 - +0.4 760,577 + -0.1 760,685 + +0.1 760,713 - +0.1 760,748 + +0.0 760,772 + +0.1 760,844 - -1.5 760,947 - -0.3 760,987 - -0.4 761,057 - -0.1 761,062 - +1.1 761,189 - Dshi_0750 0.24 +0.9 761,205 + Dshi_0750 0.26 -0.1 761,307 - Dshi_0750 0.39 +0.5
Or see this region's nucleotide sequence