Experiment: m.b. nitrite 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_742 and HP15_743 are separated by 248 nucleotides HP15_743 and HP15_744 are separated by 13 nucleotides HP15_744 and HP15_745 are separated by 17 nucleotides
HP15_742: HP15_742 - acetyl-CoA hydrolase, at 750,020 to 752,230
_742
HP15_743: HP15_743 - hypothetical protein, at 752,479 to 752,604
_743
HP15_744: HP15_744 - phospholipid/glycerol acyltransferase, at 752,618 to 753,478
_744
HP15_745: HP15_745 - conserved hypothetical protein, at 753,496 to 754,257
_745
Position (kb) 752
753 Strain fitness (log2 ratio) -2
-1
0
1 at 751.504 kb on + strand, within HP15_742 at 751.534 kb on + strand, within HP15_742 at 751.539 kb on + strand, within HP15_742 at 751.547 kb on - strand, within HP15_742 at 751.559 kb on - strand, within HP15_742 at 751.587 kb on - strand, within HP15_742 at 751.620 kb on + strand, within HP15_742 at 751.657 kb on + strand, within HP15_742 at 751.660 kb on - strand, within HP15_742 at 751.665 kb on - strand, within HP15_742 at 751.669 kb on + strand, within HP15_742 at 751.677 kb on - strand, within HP15_742 at 751.677 kb on - strand, within HP15_742 at 751.706 kb on - strand, within HP15_742 at 751.760 kb on + strand, within HP15_742 at 751.797 kb on + strand, within HP15_742 at 751.901 kb on - strand, within HP15_742 at 752.025 kb on - strand at 752.136 kb on - strand at 752.144 kb on - strand at 752.189 kb on - strand at 752.218 kb on + strand at 752.234 kb on - strand at 752.252 kb on - strand at 752.351 kb on - strand at 752.458 kb on - strand at 752.458 kb on - strand at 752.492 kb on - strand, within HP15_743 at 752.499 kb on - strand, within HP15_743 at 752.667 kb on + strand at 752.694 kb on + strand at 752.694 kb on + strand at 752.771 kb on - strand, within HP15_744 at 752.775 kb on - strand, within HP15_744 at 752.821 kb on - strand, within HP15_744 at 752.830 kb on + strand at 752.835 kb on + strand, within HP15_744 at 752.985 kb on + strand, within HP15_744 at 752.993 kb on - strand, within HP15_744 at 753.022 kb on + strand, within HP15_744 at 753.058 kb on - strand, within HP15_744 at 753.100 kb on - strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.110 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.219 kb on - strand, within HP15_744 at 753.300 kb on + strand, within HP15_744 at 753.300 kb on + strand, within HP15_744 at 753.347 kb on + strand, within HP15_744 at 753.412 kb on + strand at 753.560 kb on + strand at 753.575 kb on - strand, within HP15_745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 10 mM remove 751,504 + HP15_742 0.67 -0.1 751,534 + HP15_742 0.68 -0.1 751,539 + HP15_742 0.69 -0.1 751,547 - HP15_742 0.69 -0.5 751,559 - HP15_742 0.70 +0.3 751,587 - HP15_742 0.71 -0.1 751,620 + HP15_742 0.72 +0.1 751,657 + HP15_742 0.74 -0.7 751,660 - HP15_742 0.74 -0.7 751,665 - HP15_742 0.74 -0.3 751,669 + HP15_742 0.75 +0.2 751,677 - HP15_742 0.75 -0.5 751,677 - HP15_742 0.75 -0.2 751,706 - HP15_742 0.76 +0.5 751,760 + HP15_742 0.79 -0.2 751,797 + HP15_742 0.80 +0.7 751,901 - HP15_742 0.85 +0.4 752,025 - -0.1 752,136 - -0.5 752,144 - -0.1 752,189 - -0.1 752,218 + -0.2 752,234 - +0.5 752,252 - -0.5 752,351 - -0.0 752,458 - -0.2 752,458 - +0.3 752,492 - HP15_743 0.10 +1.3 752,499 - HP15_743 0.16 +0.4 752,667 + +0.1 752,694 + -1.9 752,694 + -0.8 752,771 - HP15_744 0.18 -0.3 752,775 - HP15_744 0.18 -0.1 752,821 - HP15_744 0.24 -0.2 752,830 + -1.1 752,835 + HP15_744 0.25 -0.3 752,985 + HP15_744 0.43 -0.5 752,993 - HP15_744 0.44 -0.7 753,022 + HP15_744 0.47 -0.1 753,058 - HP15_744 0.51 +0.5 753,100 - HP15_744 0.56 +0.4 753,107 + HP15_744 0.57 -0.2 753,107 + HP15_744 0.57 -0.0 753,110 - HP15_744 0.57 +0.3 753,115 - HP15_744 0.58 +0.2 753,115 - HP15_744 0.58 -0.2 753,219 - HP15_744 0.70 -1.5 753,300 + HP15_744 0.79 -0.2 753,300 + HP15_744 0.79 +0.2 753,347 + HP15_744 0.85 -1.1 753,412 + +0.2 753,560 + -0.4 753,575 - HP15_745 0.10 -0.1
Or see this region's nucleotide sequence