Experiment: m.b. nitrite 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_69 and HP15_70 are separated by 12 nucleotides
HP15_69: HP15_69 - hypothetical protein, at 78,075 to 78,182
_69
HP15_70: HP15_70 - conserved hypothetical protein, at 78,195 to 78,506
_70
Position (kb)
78
79 Strain fitness (log2 ratio)
-2
-1
0
1 at 77.089 kb on + strand at 77.089 kb on + strand at 77.089 kb on + strand at 77.089 kb on + strand at 77.092 kb on - strand at 77.097 kb on - strand at 77.183 kb on + strand at 77.331 kb on - strand at 77.353 kb on + strand at 77.378 kb on - strand at 77.379 kb on + strand at 77.478 kb on - strand at 77.565 kb on + strand at 77.594 kb on + strand at 77.607 kb on - strand at 77.639 kb on + strand at 77.667 kb on + strand at 77.782 kb on - strand at 77.839 kb on + strand at 77.892 kb on + strand at 77.957 kb on - strand at 78.061 kb on - strand at 78.071 kb on - strand at 78.071 kb on - strand at 78.071 kb on - strand at 78.077 kb on - strand at 78.082 kb on + strand at 78.110 kb on - strand, within HP15_69 at 78.164 kb on + strand, within HP15_69 at 78.330 kb on + strand, within HP15_70 at 78.330 kb on + strand, within HP15_70 at 78.357 kb on + strand, within HP15_70 at 78.359 kb on - strand, within HP15_70 at 78.365 kb on - strand, within HP15_70 at 78.377 kb on - strand, within HP15_70 at 78.398 kb on + strand, within HP15_70 at 78.585 kb on + strand at 78.593 kb on - strand at 78.610 kb on - strand at 78.625 kb on - strand at 78.640 kb on + strand at 78.648 kb on - strand at 78.680 kb on - strand at 78.699 kb on + strand at 78.710 kb on + strand at 78.732 kb on - strand at 78.797 kb on - strand at 78.902 kb on + strand at 78.940 kb on - strand at 78.958 kb on - strand at 79.020 kb on - strand at 79.032 kb on + strand at 79.089 kb on + strand at 79.101 kb on + strand at 79.157 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 10 mM remove 77,089 + -0.3 77,089 + +0.2 77,089 + -0.6 77,089 + -0.7 77,092 - +0.1 77,097 - -0.2 77,183 + -0.8 77,331 - +0.0 77,353 + -1.5 77,378 - -0.1 77,379 + -0.2 77,478 - -0.2 77,565 + -0.1 77,594 + +0.1 77,607 - -0.6 77,639 + -0.2 77,667 + -0.0 77,782 - -1.9 77,839 + -0.7 77,892 + +0.9 77,957 - -0.1 78,061 - +0.5 78,071 - +0.1 78,071 - +0.1 78,071 - +0.4 78,077 - -0.1 78,082 + -0.5 78,110 - HP15_69 0.32 -0.2 78,164 + HP15_69 0.82 -0.7 78,330 + HP15_70 0.43 -0.0 78,330 + HP15_70 0.43 +0.4 78,357 + HP15_70 0.52 -0.5 78,359 - HP15_70 0.53 -0.2 78,365 - HP15_70 0.54 +0.2 78,377 - HP15_70 0.58 -0.1 78,398 + HP15_70 0.65 +0.1 78,585 + +0.7 78,593 - -0.1 78,610 - -0.1 78,625 - -0.1 78,640 + +0.3 78,648 - -0.5 78,680 - -0.4 78,699 + -0.0 78,710 + -0.6 78,732 - +0.8 78,797 - +0.4 78,902 + +0.2 78,940 - -0.2 78,958 - -0.1 79,020 - +0.5 79,032 + +0.3 79,089 + +0.3 79,101 + +0.2 79,157 + +0.7
Or see this region's nucleotide sequence