Experiment: m.b. Phosphomycin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c06990 and PGA1_c07000 are separated by 15 nucleotides PGA1_c07000 and PGA1_c07010 are separated by 234 nucleotides PGA1_c07010 and PGA1_c07020 are separated by 127 nucleotides
PGA1_c06990: PGA1_c06990 - 50S ribosomal protein L35, at 718,735 to 718,935
_c06990
PGA1_c07000: PGA1_c07000 - 50S ribosomal protein L20, at 718,951 to 719,316
_c07000
PGA1_c07010: PGA1_c07010 - phenylalanyl-tRNA synthetase alpha chain, at 719,551 to 720,624
_c07010
PGA1_c07020: PGA1_c07020 - Poly(3-hydroxybutyrate) depolymerase, at 720,752 to 721,573
_c07020
Position (kb) 719
720
721 Strain fitness (log2 ratio) -2
-1
0
1
2 at 718.576 kb on + strand at 718.586 kb on + strand at 719.509 kb on + strand at 719.536 kb on + strand at 720.584 kb on + strand at 720.584 kb on + strand at 720.609 kb on - strand at 720.618 kb on - strand at 720.658 kb on + strand at 720.758 kb on + strand at 720.772 kb on + strand at 720.780 kb on - strand at 720.787 kb on + strand at 720.790 kb on - strand at 720.805 kb on - strand at 720.826 kb on + strand at 720.826 kb on + strand at 720.866 kb on - strand, within PGA1_c07020 at 720.879 kb on + strand, within PGA1_c07020 at 720.912 kb on + strand, within PGA1_c07020 at 720.912 kb on + strand, within PGA1_c07020 at 720.914 kb on - strand, within PGA1_c07020 at 720.914 kb on - strand, within PGA1_c07020 at 720.920 kb on - strand, within PGA1_c07020 at 720.988 kb on + strand, within PGA1_c07020 at 721.037 kb on - strand, within PGA1_c07020 at 721.079 kb on + strand, within PGA1_c07020 at 721.100 kb on + strand, within PGA1_c07020 at 721.100 kb on + strand, within PGA1_c07020 at 721.100 kb on + strand, within PGA1_c07020 at 721.100 kb on + strand, within PGA1_c07020 at 721.100 kb on + strand, within PGA1_c07020 at 721.143 kb on + strand, within PGA1_c07020 at 721.151 kb on - strand, within PGA1_c07020 at 721.211 kb on + strand, within PGA1_c07020 at 721.253 kb on + strand, within PGA1_c07020 at 721.369 kb on - strand, within PGA1_c07020 at 721.459 kb on - strand, within PGA1_c07020 at 721.459 kb on - strand, within PGA1_c07020 at 721.479 kb on + strand, within PGA1_c07020 at 721.499 kb on + strand at 721.574 kb on + strand at 721.591 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 2 mg/ml remove 718,576 + -1.2 718,586 + +0.3 719,509 + +1.6 719,536 + +0.9 720,584 + -1.9 720,584 + +0.3 720,609 - -0.2 720,618 - +1.0 720,658 + +0.1 720,758 + -0.4 720,772 + +1.3 720,780 - -0.1 720,787 + +1.1 720,790 - -2.4 720,805 - +0.5 720,826 + -2.4 720,826 + +0.6 720,866 - PGA1_c07020 0.14 -0.0 720,879 + PGA1_c07020 0.15 +0.6 720,912 + PGA1_c07020 0.19 +0.3 720,912 + PGA1_c07020 0.19 +0.6 720,914 - PGA1_c07020 0.20 +0.1 720,914 - PGA1_c07020 0.20 +0.2 720,920 - PGA1_c07020 0.20 -0.1 720,988 + PGA1_c07020 0.29 -0.8 721,037 - PGA1_c07020 0.35 +0.9 721,079 + PGA1_c07020 0.40 +2.6 721,100 + PGA1_c07020 0.42 +0.6 721,100 + PGA1_c07020 0.42 +0.3 721,100 + PGA1_c07020 0.42 -0.1 721,100 + PGA1_c07020 0.42 +0.4 721,100 + PGA1_c07020 0.42 +0.2 721,143 + PGA1_c07020 0.48 -1.5 721,151 - PGA1_c07020 0.49 +1.1 721,211 + PGA1_c07020 0.56 +0.8 721,253 + PGA1_c07020 0.61 -0.1 721,369 - PGA1_c07020 0.75 +0.3 721,459 - PGA1_c07020 0.86 +1.0 721,459 - PGA1_c07020 0.86 -0.8 721,479 + PGA1_c07020 0.88 +1.4 721,499 + -1.1 721,574 + +1.2 721,591 + +0.6
Or see this region's nucleotide sequence