Experiment: m.b. Phosphomycin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_262p01290 and PGA1_262p01300 are separated by 156 nucleotides PGA1_262p01300 and PGA1_262p01310 are separated by 125 nucleotides
PGA1_262p01290: PGA1_262p01290 - transcriptional regulator, AraC family, at 139,970 to 140,977
_262p01290
PGA1_262p01300: PGA1_262p01300 - Cupin domain., at 141,134 to 141,574
_262p01300
PGA1_262p01310: PGA1_262p01310 - putative flavin-containing monooxygenase, at 141,700 to 143,187
_262p01310
Position (kb) 141
142 Strain fitness (log2 ratio) -2
-1
0
1
2 at 140.152 kb on + strand, within PGA1_262p01290 at 140.215 kb on - strand, within PGA1_262p01290 at 140.215 kb on - strand, within PGA1_262p01290 at 140.446 kb on + strand, within PGA1_262p01290 at 140.454 kb on - strand, within PGA1_262p01290 at 140.533 kb on - strand, within PGA1_262p01290 at 140.620 kb on - strand, within PGA1_262p01290 at 140.637 kb on + strand, within PGA1_262p01290 at 140.647 kb on + strand, within PGA1_262p01290 at 140.908 kb on + strand at 140.950 kb on - strand at 140.962 kb on + strand at 140.988 kb on + strand at 141.098 kb on - strand at 141.178 kb on + strand, within PGA1_262p01300 at 141.197 kb on - strand, within PGA1_262p01300 at 141.357 kb on + strand, within PGA1_262p01300 at 141.407 kb on + strand, within PGA1_262p01300 at 141.476 kb on - strand, within PGA1_262p01300 at 141.523 kb on + strand, within PGA1_262p01300 at 141.557 kb on + strand at 141.729 kb on - strand at 141.802 kb on - strand at 141.924 kb on + strand, within PGA1_262p01310 at 141.947 kb on - strand, within PGA1_262p01310 at 142.011 kb on - strand, within PGA1_262p01310 at 142.041 kb on + strand, within PGA1_262p01310 at 142.218 kb on - strand, within PGA1_262p01310 at 142.435 kb on - strand, within PGA1_262p01310 at 142.566 kb on + strand, within PGA1_262p01310 at 142.566 kb on + strand, within PGA1_262p01310 at 142.574 kb on - strand, within PGA1_262p01310 at 142.574 kb on - strand, within PGA1_262p01310
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 2 mg/ml remove 140,152 + PGA1_262p01290 0.18 +0.7 140,215 - PGA1_262p01290 0.24 +0.7 140,215 - PGA1_262p01290 0.24 +0.3 140,446 + PGA1_262p01290 0.47 +0.7 140,454 - PGA1_262p01290 0.48 -0.7 140,533 - PGA1_262p01290 0.56 -1.4 140,620 - PGA1_262p01290 0.64 -0.8 140,637 + PGA1_262p01290 0.66 -1.0 140,647 + PGA1_262p01290 0.67 +0.6 140,908 + -2.2 140,950 - +1.3 140,962 + -0.2 140,988 + -2.1 141,098 - +0.1 141,178 + PGA1_262p01300 0.10 +0.8 141,197 - PGA1_262p01300 0.14 +1.0 141,357 + PGA1_262p01300 0.51 +0.4 141,407 + PGA1_262p01300 0.62 +2.2 141,476 - PGA1_262p01300 0.78 -1.2 141,523 + PGA1_262p01300 0.88 +0.3 141,557 + +0.6 141,729 - +1.8 141,802 - -1.8 141,924 + PGA1_262p01310 0.15 +0.4 141,947 - PGA1_262p01310 0.17 +0.6 142,011 - PGA1_262p01310 0.21 +0.1 142,041 + PGA1_262p01310 0.23 -0.6 142,218 - PGA1_262p01310 0.35 -0.3 142,435 - PGA1_262p01310 0.49 -0.6 142,566 + PGA1_262p01310 0.58 -0.4 142,566 + PGA1_262p01310 0.58 +0.5 142,574 - PGA1_262p01310 0.59 +0.4 142,574 - PGA1_262p01310 0.59 +0.4
Or see this region's nucleotide sequence