Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30320

Experiment: m.b. Phosphomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 2 mg/ml
3,168,873	+				+0.3
3,169,060	-		PGA1_c30310	0.18	+0.3
3,169,083	+		PGA1_c30310	0.21	+0.7
3,169,084	+		PGA1_c30310	0.21	+3.0
3,169,089	-		PGA1_c30310	0.22	+1.1
3,169,091	-		PGA1_c30310	0.22	+1.7
3,169,123	+		PGA1_c30310	0.26	+0.7
3,169,131	-		PGA1_c30310	0.27	+0.7
3,169,847	+				-0.8
3,169,847	+				+0.1
3,169,851	-				-1.3
3,169,855	-				+1.1
3,169,855	-				-1.3
3,169,855	-				-0.2
3,169,888	+				-0.7
3,169,917	-		PGA1_c30320	0.12	-1.4
3,169,964	+		PGA1_c30320	0.19	+1.2
3,169,965	-		PGA1_c30320	0.19	-1.8
3,170,020	-		PGA1_c30320	0.27	+0.1
3,170,037	-		PGA1_c30320	0.30	-2.8
3,170,120	-		PGA1_c30320	0.42	+0.1
3,170,120	-		PGA1_c30320	0.42	-0.3
3,170,124	-		PGA1_c30320	0.43	+0.9
3,170,162	+		PGA1_c30320	0.48	-0.8
3,170,182	-		PGA1_c30320	0.51	+0.5
3,170,204	+		PGA1_c30320	0.55	+0.1
3,170,204	+		PGA1_c30320	0.55	-1.2
3,170,204	+		PGA1_c30320	0.55	+0.2
3,170,204	+		PGA1_c30320	0.55	-0.5
3,170,204	+		PGA1_c30320	0.55	+0.7
3,170,212	-		PGA1_c30320	0.56	-1.0
3,170,212	-		PGA1_c30320	0.56	-0.3
3,170,212	-		PGA1_c30320	0.56	-1.5
3,170,212	-		PGA1_c30320	0.56	+0.4
3,170,212	-		PGA1_c30320	0.56	+0.5
3,170,212	-		PGA1_c30320	0.56	-0.5
3,170,212	-		PGA1_c30320	0.56	-1.0
3,170,212	-		PGA1_c30320	0.56	-1.6
3,170,212	-		PGA1_c30320	0.56	-1.8
3,170,212	-		PGA1_c30320	0.56	-1.2
3,170,212	-		PGA1_c30320	0.56	+0.3
3,170,212	-		PGA1_c30320	0.56	-3.2
3,170,212	-		PGA1_c30320	0.56	-0.2
3,170,231	-		PGA1_c30320	0.59	-0.7
3,170,249	+		PGA1_c30320	0.61	+0.0
3,170,267	-		PGA1_c30320	0.64	+0.5
3,170,323	-		PGA1_c30320	0.73	-1.1
3,170,340	+		PGA1_c30320	0.75	-1.7
3,170,348	-		PGA1_c30320	0.76	-0.5
3,170,353	-		PGA1_c30320	0.77	-0.8
3,170,366	-		PGA1_c30320	0.79	-1.3
3,170,394	+		PGA1_c30320	0.83	-0.1
3,170,402	-		PGA1_c30320	0.84	+1.3
3,170,404	+		PGA1_c30320	0.85	+0.2
3,170,535	-				-1.0
3,170,550	+				+0.5
3,170,559	-				+0.0
3,170,641	+				+1.3
3,170,641	+				+1.9
3,170,689	+				-0.7
3,170,689	+				-0.8
3,170,697	-				-2.0
3,170,763	-				-1.8
3,170,770	+				+0.0
3,170,778	-				-0.1
3,170,778	-				-1.8
3,170,778	-				+1.2
3,170,866	-		PGA1_c30340	0.18	-0.1
3,170,881	+		PGA1_c30340	0.20	-2.1
3,170,944	+		PGA1_c30340	0.27	-0.5
3,170,957	-		PGA1_c30340	0.29	+0.6
3,171,003	+		PGA1_c30340	0.34	+0.6
3,171,003	+		PGA1_c30340	0.34	-0.6
3,171,011	-		PGA1_c30340	0.35	-0.5
3,171,020	+		PGA1_c30340	0.36	+0.0
3,171,020	+		PGA1_c30340	0.36	-0.2
3,171,020	+		PGA1_c30340	0.36	-0.7
3,171,020	+		PGA1_c30340	0.36	-1.0
3,171,020	+		PGA1_c30340	0.36	+0.1
3,171,020	+		PGA1_c30340	0.36	+0.5
3,171,020	+		PGA1_c30340	0.36	+0.2
3,171,028	-		PGA1_c30340	0.37	-0.2
3,171,028	-		PGA1_c30340	0.37	-1.8
3,171,028	-		PGA1_c30340	0.37	-1.0
3,171,037	+		PGA1_c30340	0.38	-0.6
3,171,045	-		PGA1_c30340	0.39	-0.7
3,171,045	-		PGA1_c30340	0.39	+0.0
3,171,100	+		PGA1_c30340	0.45	+0.6
3,171,108	-		PGA1_c30340	0.46	+1.7
3,171,108	-		PGA1_c30340	0.46	+1.4
3,171,116	-		PGA1_c30340	0.47	+0.2
3,171,211	+		PGA1_c30340	0.58	-1.1
3,171,211	+		PGA1_c30340	0.58	-0.3
3,171,217	+		PGA1_c30340	0.59	-1.8
3,171,225	-		PGA1_c30340	0.60	-0.9
3,171,285	+		PGA1_c30340	0.67	+1.1
3,171,309	-		PGA1_c30340	0.70	+0.7
3,171,323	-		PGA1_c30340	0.71	+0.4
3,171,323	-		PGA1_c30340	0.71	-0.2
3,171,337	+		PGA1_c30340	0.73	-0.1
3,171,371	-		PGA1_c30340	0.77	+0.3
3,171,436	-		PGA1_c30340	0.84	+0.3
3,171,473	+		PGA1_c30340	0.89	+0.7