Strain Fitness in Dechlorosoma suillum PS around Dsui_3445

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3444 and Dsui_3445 are separated by 11 nucleotidesDsui_3445 and Dsui_3446 overlap by 1 nucleotides Dsui_3444: Dsui_3444 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 3,702,296 to 3,703,393 _3444 Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051 _3445 Dsui_3446: Dsui_3446 - 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase, at 3,705,051 to 3,705,959 _3446 Position (kb) 3703 3704 3705 3706Strain fitness (log2 ratio) -3 -2 -1 0 1at 3702.528 kb on + strand, within Dsui_3444at 3702.579 kb on - strand, within Dsui_3444at 3702.624 kb on + strand, within Dsui_3444at 3702.654 kb on - strand, within Dsui_3444at 3702.677 kb on - strand, within Dsui_3444at 3702.775 kb on + strand, within Dsui_3444at 3702.781 kb on - strand, within Dsui_3444at 3702.783 kb on + strand, within Dsui_3444at 3702.783 kb on - strand, within Dsui_3444at 3702.961 kb on + strand, within Dsui_3444at 3702.980 kb on + strand, within Dsui_3444at 3703.059 kb on + strand, within Dsui_3444at 3703.158 kb on + strand, within Dsui_3444at 3703.375 kb on + strandat 3703.485 kb on + strandat 3703.490 kb on + strandat 3703.689 kb on + strand, within Dsui_3445at 3703.812 kb on - strand, within Dsui_3445at 3703.855 kb on - strand, within Dsui_3445at 3703.879 kb on - strandat 3703.959 kb on - strandat 3703.976 kb on + strand, within Dsui_3445at 3704.100 kb on + strand, within Dsui_3445at 3704.118 kb on + strand, within Dsui_3445at 3704.118 kb on + strand, within Dsui_3445at 3704.126 kb on - strand, within Dsui_3445at 3704.256 kb on - strand, within Dsui_3445at 3704.487 kb on - strand, within Dsui_3445at 3704.615 kb on + strand, within Dsui_3445at 3704.615 kb on + strand, within Dsui_3445at 3704.615 kb on + strand, within Dsui_3445at 3704.642 kb on - strand, within Dsui_3445at 3704.695 kb on - strand, within Dsui_3445at 3704.697 kb on + strand, within Dsui_3445at 3704.759 kb on + strand, within Dsui_3445at 3704.801 kb on + strand, within Dsui_3445at 3704.807 kb on - strand, within Dsui_3445at 3704.913 kb on - strandat 3704.918 kb on + strandat 3705.146 kb on - strand, within Dsui_3446at 3705.230 kb on - strand, within Dsui_3446at 3705.237 kb on - strand, within Dsui_3446at 3705.541 kb on + strand, within Dsui_3446at 3705.661 kb on + strand, within Dsui_3446at 3705.715 kb on - strand, within Dsui_3446at 3705.750 kb on - strand, within Dsui_3446at 3706.015 kb on + strandat 3706.035 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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3,702,528 + Dsui_3444 0.21 +0.6
3,702,579 - Dsui_3444 0.26 +0.7
3,702,624 + Dsui_3444 0.30 +0.6
3,702,654 - Dsui_3444 0.33 -0.3
3,702,677 - Dsui_3444 0.35 -1.3
3,702,775 + Dsui_3444 0.44 +0.5
3,702,781 - Dsui_3444 0.44 -2.3
3,702,783 + Dsui_3444 0.44 +0.9
3,702,783 - Dsui_3444 0.44 +0.7
3,702,961 + Dsui_3444 0.61 +0.7
3,702,980 + Dsui_3444 0.62 +0.3
3,703,059 + Dsui_3444 0.69 -0.1
3,703,158 + Dsui_3444 0.79 +0.8
3,703,375 + +0.7
3,703,485 + +0.1
3,703,490 + +0.7
3,703,689 + Dsui_3445 0.17 +0.6
3,703,812 - Dsui_3445 0.25 +0.7
3,703,855 - Dsui_3445 0.27 -0.3
3,703,879 - +0.7
3,703,959 - +0.7
3,703,976 + Dsui_3445 0.35 +0.8
3,704,100 + Dsui_3445 0.42 +0.6
3,704,118 + Dsui_3445 0.43 +0.7
3,704,118 + Dsui_3445 0.43 +0.8
3,704,126 - Dsui_3445 0.44 +0.7
3,704,256 - Dsui_3445 0.52 -1.6
3,704,487 - Dsui_3445 0.66 -3.5
3,704,615 + Dsui_3445 0.73 +1.0
3,704,615 + Dsui_3445 0.73 +0.8
3,704,615 + Dsui_3445 0.73 +0.6
3,704,642 - Dsui_3445 0.75 +0.7
3,704,695 - Dsui_3445 0.78 +0.7
3,704,697 + Dsui_3445 0.78 +0.4
3,704,759 + Dsui_3445 0.82 +0.8
3,704,801 + Dsui_3445 0.85 +0.9
3,704,807 - Dsui_3445 0.85 +0.7
3,704,913 - +0.7
3,704,918 + +0.9
3,705,146 - Dsui_3446 0.10 -0.3
3,705,230 - Dsui_3446 0.20 +0.7
3,705,237 - Dsui_3446 0.20 -1.3
3,705,541 + Dsui_3446 0.54 +0.8
3,705,661 + Dsui_3446 0.67 +0.8
3,705,715 - Dsui_3446 0.73 -0.3
3,705,750 - Dsui_3446 0.77 +0.7
3,706,015 + -0.3
3,706,035 + -0.3

Or see this region's nucleotide sequence