Strain Fitness in Dechlorosoma suillum PS around Dsui_3444

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3443 and Dsui_3444 are separated by 282 nucleotidesDsui_3444 and Dsui_3445 are separated by 11 nucleotides Dsui_3443: Dsui_3443 - RND family efflux transporter, MFP subunit, at 3,700,934 to 3,702,013 _3443 Dsui_3444: Dsui_3444 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 3,702,296 to 3,703,393 _3444 Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051 _3445 Position (kb) 3702 3703 3704Strain fitness (log2 ratio) -2 -1 0 1at 3701.373 kb on - strandat 3701.469 kb on - strandat 3701.524 kb on - strand, within Dsui_3443at 3701.568 kb on + strandat 3701.574 kb on + strand, within Dsui_3443at 3701.579 kb on + strand, within Dsui_3443at 3701.587 kb on - strandat 3701.587 kb on - strand, within Dsui_3443at 3701.625 kb on - strand, within Dsui_3443at 3701.651 kb on + strand, within Dsui_3443at 3701.852 kb on - strandat 3701.913 kb on + strandat 3701.932 kb on - strandat 3702.187 kb on - strandat 3702.279 kb on + strandat 3702.286 kb on + strandat 3702.347 kb on - strandat 3702.528 kb on + strand, within Dsui_3444at 3702.579 kb on - strand, within Dsui_3444at 3702.624 kb on + strand, within Dsui_3444at 3702.654 kb on - strand, within Dsui_3444at 3702.677 kb on - strand, within Dsui_3444at 3702.775 kb on + strand, within Dsui_3444at 3702.781 kb on - strand, within Dsui_3444at 3702.783 kb on + strand, within Dsui_3444at 3702.783 kb on - strand, within Dsui_3444at 3702.961 kb on + strand, within Dsui_3444at 3702.980 kb on + strand, within Dsui_3444at 3703.059 kb on + strand, within Dsui_3444at 3703.158 kb on + strand, within Dsui_3444at 3703.375 kb on + strandat 3703.485 kb on + strandat 3703.490 kb on + strandat 3703.689 kb on + strand, within Dsui_3445at 3703.812 kb on - strand, within Dsui_3445at 3703.855 kb on - strand, within Dsui_3445at 3703.879 kb on - strandat 3703.959 kb on - strandat 3703.976 kb on + strand, within Dsui_3445at 3704.100 kb on + strand, within Dsui_3445at 3704.118 kb on + strand, within Dsui_3445at 3704.118 kb on + strand, within Dsui_3445at 3704.126 kb on - strand, within Dsui_3445at 3704.256 kb on - strand, within Dsui_3445

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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3,701,373 - +0.7
3,701,469 - +0.7
3,701,524 - Dsui_3443 0.55 -0.3
3,701,568 + +0.7
3,701,574 + Dsui_3443 0.59 -1.6
3,701,579 + Dsui_3443 0.60 -1.3
3,701,587 - -1.3
3,701,587 - Dsui_3443 0.60 -1.6
3,701,625 - Dsui_3443 0.64 -1.3
3,701,651 + Dsui_3443 0.66 -0.9
3,701,852 - -0.9
3,701,913 + +0.7
3,701,932 - -1.6
3,702,187 - -1.3
3,702,279 + +0.6
3,702,286 + -0.5
3,702,347 - -1.6
3,702,528 + Dsui_3444 0.21 +0.6
3,702,579 - Dsui_3444 0.26 +0.7
3,702,624 + Dsui_3444 0.30 +0.6
3,702,654 - Dsui_3444 0.33 -0.3
3,702,677 - Dsui_3444 0.35 -1.3
3,702,775 + Dsui_3444 0.44 +0.5
3,702,781 - Dsui_3444 0.44 -2.3
3,702,783 + Dsui_3444 0.44 +0.9
3,702,783 - Dsui_3444 0.44 +0.7
3,702,961 + Dsui_3444 0.61 +0.7
3,702,980 + Dsui_3444 0.62 +0.3
3,703,059 + Dsui_3444 0.69 -0.1
3,703,158 + Dsui_3444 0.79 +0.8
3,703,375 + +0.7
3,703,485 + +0.1
3,703,490 + +0.7
3,703,689 + Dsui_3445 0.17 +0.6
3,703,812 - Dsui_3445 0.25 +0.7
3,703,855 - Dsui_3445 0.27 -0.3
3,703,879 - +0.7
3,703,959 - +0.7
3,703,976 + Dsui_3445 0.35 +0.8
3,704,100 + Dsui_3445 0.42 +0.6
3,704,118 + Dsui_3445 0.43 +0.7
3,704,118 + Dsui_3445 0.43 +0.8
3,704,126 - Dsui_3445 0.44 +0.7
3,704,256 - Dsui_3445 0.52 -1.6

Or see this region's nucleotide sequence