Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3443 and Dsui_3444 are separated by 282 nucleotides Dsui_3444 and Dsui_3445 are separated by 11 nucleotides
Dsui_3443: Dsui_3443 - RND family efflux transporter, MFP subunit, at 3,700,934 to 3,702,013
_3443
Dsui_3444: Dsui_3444 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 3,702,296 to 3,703,393
_3444
Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051
_3445
Position (kb)
3702
3703
3704 Strain fitness (log2 ratio)
-2
-1
0
1 at 3701.373 kb on - strand at 3701.469 kb on - strand at 3701.524 kb on - strand, within Dsui_3443 at 3701.568 kb on + strand at 3701.574 kb on + strand, within Dsui_3443 at 3701.579 kb on + strand, within Dsui_3443 at 3701.587 kb on - strand at 3701.587 kb on - strand, within Dsui_3443 at 3701.625 kb on - strand, within Dsui_3443 at 3701.651 kb on + strand, within Dsui_3443 at 3701.852 kb on - strand at 3701.913 kb on + strand at 3701.932 kb on - strand at 3702.187 kb on - strand at 3702.279 kb on + strand at 3702.286 kb on + strand at 3702.347 kb on - strand at 3702.528 kb on + strand, within Dsui_3444 at 3702.579 kb on - strand, within Dsui_3444 at 3702.624 kb on + strand, within Dsui_3444 at 3702.654 kb on - strand, within Dsui_3444 at 3702.677 kb on - strand, within Dsui_3444 at 3702.775 kb on + strand, within Dsui_3444 at 3702.781 kb on - strand, within Dsui_3444 at 3702.783 kb on + strand, within Dsui_3444 at 3702.783 kb on - strand, within Dsui_3444 at 3702.961 kb on + strand, within Dsui_3444 at 3702.980 kb on + strand, within Dsui_3444 at 3703.059 kb on + strand, within Dsui_3444 at 3703.158 kb on + strand, within Dsui_3444 at 3703.375 kb on + strand at 3703.485 kb on + strand at 3703.490 kb on + strand at 3703.689 kb on + strand, within Dsui_3445 at 3703.812 kb on - strand, within Dsui_3445 at 3703.855 kb on - strand, within Dsui_3445 at 3703.879 kb on - strand at 3703.959 kb on - strand at 3703.976 kb on + strand, within Dsui_3445 at 3704.100 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.126 kb on - strand, within Dsui_3445 at 3704.256 kb on - strand, within Dsui_3445
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 3,701,373 - +0.7 3,701,469 - +0.7 3,701,524 - Dsui_3443 0.55 -0.3 3,701,568 + +0.7 3,701,574 + Dsui_3443 0.59 -1.6 3,701,579 + Dsui_3443 0.60 -1.3 3,701,587 - -1.3 3,701,587 - Dsui_3443 0.60 -1.6 3,701,625 - Dsui_3443 0.64 -1.3 3,701,651 + Dsui_3443 0.66 -0.9 3,701,852 - -0.9 3,701,913 + +0.7 3,701,932 - -1.6 3,702,187 - -1.3 3,702,279 + +0.6 3,702,286 + -0.5 3,702,347 - -1.6 3,702,528 + Dsui_3444 0.21 +0.6 3,702,579 - Dsui_3444 0.26 +0.7 3,702,624 + Dsui_3444 0.30 +0.6 3,702,654 - Dsui_3444 0.33 -0.3 3,702,677 - Dsui_3444 0.35 -1.3 3,702,775 + Dsui_3444 0.44 +0.5 3,702,781 - Dsui_3444 0.44 -2.3 3,702,783 + Dsui_3444 0.44 +0.9 3,702,783 - Dsui_3444 0.44 +0.7 3,702,961 + Dsui_3444 0.61 +0.7 3,702,980 + Dsui_3444 0.62 +0.3 3,703,059 + Dsui_3444 0.69 -0.1 3,703,158 + Dsui_3444 0.79 +0.8 3,703,375 + +0.7 3,703,485 + +0.1 3,703,490 + +0.7 3,703,689 + Dsui_3445 0.17 +0.6 3,703,812 - Dsui_3445 0.25 +0.7 3,703,855 - Dsui_3445 0.27 -0.3 3,703,879 - +0.7 3,703,959 - +0.7 3,703,976 + Dsui_3445 0.35 +0.8 3,704,100 + Dsui_3445 0.42 +0.6 3,704,118 + Dsui_3445 0.43 +0.7 3,704,118 + Dsui_3445 0.43 +0.8 3,704,126 - Dsui_3445 0.44 +0.7 3,704,256 - Dsui_3445 0.52 -1.6
Or see this region's nucleotide sequence