Strain Fitness in Dechlorosoma suillum PS around Dsui_2857

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2856 and Dsui_2857 are separated by 101 nucleotidesDsui_2857 and Dsui_2858 overlap by 8 nucleotides Dsui_2856: Dsui_2856 - methyl-accepting chemotaxis protein, at 3,044,547 to 3,046,568 _2856 Dsui_2857: Dsui_2857 - lipoprotein releasing system, ATP-binding protein, at 3,046,670 to 3,047,419 _2857 Dsui_2858: Dsui_2858 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 3,047,412 to 3,048,659 _2858 Position (kb) 3046 3047 3048Strain fitness (log2 ratio) -1 0 1at 3045.706 kb on + strand, within Dsui_2856at 3045.714 kb on - strand, within Dsui_2856at 3045.714 kb on - strand, within Dsui_2856at 3045.714 kb on - strand, within Dsui_2856at 3045.783 kb on - strand, within Dsui_2856at 3045.829 kb on - strand, within Dsui_2856at 3046.044 kb on + strandat 3046.081 kb on - strand, within Dsui_2856at 3046.091 kb on + strand, within Dsui_2856at 3046.111 kb on - strand, within Dsui_2856at 3046.117 kb on - strand, within Dsui_2856at 3046.136 kb on - strand, within Dsui_2856at 3046.302 kb on - strand, within Dsui_2856at 3046.355 kb on + strandat 3046.363 kb on - strand, within Dsui_2856at 3046.461 kb on + strandat 3046.518 kb on + strandat 3046.530 kb on + strandat 3046.538 kb on - strandat 3046.538 kb on - strandat 3046.585 kb on - strandat 3046.590 kb on - strandat 3046.590 kb on - strandat 3047.417 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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3,045,706 + Dsui_2856 0.57 -0.2
3,045,714 - Dsui_2856 0.58 +0.1
3,045,714 - Dsui_2856 0.58 +0.0
3,045,714 - Dsui_2856 0.58 +0.0
3,045,783 - Dsui_2856 0.61 +0.5
3,045,829 - Dsui_2856 0.63 -0.2
3,046,044 + +0.8
3,046,081 - Dsui_2856 0.76 -0.5
3,046,091 + Dsui_2856 0.76 -0.7
3,046,111 - Dsui_2856 0.77 -0.2
3,046,117 - Dsui_2856 0.78 -0.3
3,046,136 - Dsui_2856 0.79 +0.1
3,046,302 - Dsui_2856 0.87 +0.4
3,046,355 + +0.8
3,046,363 - Dsui_2856 0.90 -0.1
3,046,461 + -0.2
3,046,518 + -0.2
3,046,530 + -0.7
3,046,538 - -0.1
3,046,538 - -0.5
3,046,585 - +0.1
3,046,590 - -0.3
3,046,590 - -0.3
3,047,417 - +0.0

Or see this region's nucleotide sequence